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authorJason W. Bacon <jwb@FreeBSD.org>2021-10-13 16:01:52 +0000
committerJason W. Bacon <jwb@FreeBSD.org>2021-10-13 16:02:13 +0000
commit06e26353b27ad89d8b30d26865a330d4feeb58d9 (patch)
treeeec38ac52c3a39e9e6c0293c3e309155c8badcc2
parent646f3fc38189ac3bd4d764b366a3e685b46775da (diff)
downloadports-06e26353b27ad89d8b30d26865a330d4feeb58d9.tar.gz
ports-06e26353b27ad89d8b30d26865a330d4feeb58d9.zip
biology/py-deeptoolsintervals: Python interface for deepTools interval trees
Deeptools_intervals is an interval tree backend designed to interface with deepTools, supporting metadata associated with each interval.
-rw-r--r--biology/py-deeptoolsintervals/Makefile16
-rw-r--r--biology/py-deeptoolsintervals/distinfo3
-rw-r--r--biology/py-deeptoolsintervals/files/patch-setup.py11
-rw-r--r--biology/py-deeptoolsintervals/pkg-descr4
4 files changed, 34 insertions, 0 deletions
diff --git a/biology/py-deeptoolsintervals/Makefile b/biology/py-deeptoolsintervals/Makefile
new file mode 100644
index 000000000000..e6ebc1066803
--- /dev/null
+++ b/biology/py-deeptoolsintervals/Makefile
@@ -0,0 +1,16 @@
+PORTNAME= deeptoolsintervals
+DISTVERSION= 0.1.9
+CATEGORIES= biology python
+MASTER_SITES= CHEESESHOP
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER= jwb@FreeBSD.org
+COMMENT= Python interface for deepTools interval trees
+
+LICENSE= MIT
+LICENSE_FILE= ${WRKSRC}/LICENSE
+
+USES= python
+USE_PYTHON= autoplist distutils
+
+.include <bsd.port.mk>
diff --git a/biology/py-deeptoolsintervals/distinfo b/biology/py-deeptoolsintervals/distinfo
new file mode 100644
index 000000000000..9933b91e8868
--- /dev/null
+++ b/biology/py-deeptoolsintervals/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1617289403
+SHA256 (deeptoolsintervals-0.1.9.tar.gz) = 7d94c36fd2b6f10d8b99e536d2672e8228971f1fc810497d33527bba2c40d4f6
+SIZE (deeptoolsintervals-0.1.9.tar.gz) = 41123
diff --git a/biology/py-deeptoolsintervals/files/patch-setup.py b/biology/py-deeptoolsintervals/files/patch-setup.py
new file mode 100644
index 000000000000..d8d41de78a6e
--- /dev/null
+++ b/biology/py-deeptoolsintervals/files/patch-setup.py
@@ -0,0 +1,11 @@
+--- setup.py.orig 2021-10-13 15:57:11 UTC
++++ setup.py
+@@ -32,7 +32,7 @@ setup(name='deeptoolsintervals',
+ author_email="ryan@ie-freiburg.mpg.de",
+ url="https://github.com/deeptools/deeptools_intervals",
+ keywords=["bioinformatics", "GTF"],
+- classifier=["Development Status :: 5 - Production/Stable",
++ classifiers=["Development Status :: 5 - Production/Stable",
+ "Environment :: Console",
+ "License :: OSI Approved :: MIT License",
+ "Intended Audience :: Developers",
diff --git a/biology/py-deeptoolsintervals/pkg-descr b/biology/py-deeptoolsintervals/pkg-descr
new file mode 100644
index 000000000000..368b6da1a905
--- /dev/null
+++ b/biology/py-deeptoolsintervals/pkg-descr
@@ -0,0 +1,4 @@
+Deeptools_intervals is an interval tree backend designed to interface
+with deepTools, supporting metadata associated with each interval.
+
+WWW: https://github.com/deeptools/deeptools_intervals