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authorYuri Victorovich <yuri@FreeBSD.org>2023-02-22 15:52:29 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2023-02-22 15:52:37 +0000
commit20e55e0cf2b75fa0988ae31c9814d1b8844a5428 (patch)
treeaa2f1b6ce5ad683a9a310cea3b59cdd1625d4c3a
parent4e1d80040b6689a615a2381c5762ca7b4a1cf163 (diff)
downloadports-20e55e0cf2b75fa0988ae31c9814d1b8844a5428.tar.gz
ports-20e55e0cf2b75fa0988ae31c9814d1b8844a5428.zip
math/py-openTSNE: Update 0.6.2 → 0.7.1
Reported by: portscout
-rw-r--r--math/py-openTSNE/Makefile10
-rw-r--r--math/py-openTSNE/distinfo6
-rw-r--r--math/py-openTSNE/files/patch-pyproject.toml7
3 files changed, 17 insertions, 6 deletions
diff --git a/math/py-openTSNE/Makefile b/math/py-openTSNE/Makefile
index ff46d96d228c..81fd2996276a 100644
--- a/math/py-openTSNE/Makefile
+++ b/math/py-openTSNE/Makefile
@@ -1,5 +1,5 @@
PORTNAME= openTSNE
-DISTVERSION= 0.6.2
+DISTVERSION= 0.7.1
CATEGORIES= math python # statistics
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -10,14 +10,18 @@ WWW= https://github.com/pavlin-policar/openTSNE
LICENSE= BSD3CLAUSE
-BUILD_DEPENDS= ${PYNUMPY}
+BUILD_DEPENDS= ${PYNUMPY} \
+ ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR}
LIB_DEPENDS= libfftw3.so:math/fftw3
RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.20:science/py-scikit-learn@${PY_FLAVOR}
USES= compiler:c++14-lang localbase:ldflags python:3.6+
-USE_PYTHON= distutils cython autoplist
+USE_PYTHON= pep517 cython autoplist pytest # tests fail to run, see https://github.com/pavlin-policar/openTSNE/issues/237
+
+TEST_WRKSRC= ${WRKSRC}/tests
+TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
post-install:
@${FIND} ${STAGEDIR}${PREFIX} -name "*.so" | ${XARGS} ${STRIP_CMD}
diff --git a/math/py-openTSNE/distinfo b/math/py-openTSNE/distinfo
index c5a4fff04c2c..ecc942e112e0 100644
--- a/math/py-openTSNE/distinfo
+++ b/math/py-openTSNE/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1650683874
-SHA256 (openTSNE-0.6.2.tar.gz) = 92ea18afd4e34df8fb536c813c36533de892d96511f6683721003398b4fcf2e9
-SIZE (openTSNE-0.6.2.tar.gz) = 796914
+TIMESTAMP = 1677079870
+SHA256 (openTSNE-0.7.1.tar.gz) = ff7cdd6982fef2b88fc758f571b32f25bf595e6ddbe406db6d3b40bf5242af5a
+SIZE (openTSNE-0.7.1.tar.gz) = 815425
diff --git a/math/py-openTSNE/files/patch-pyproject.toml b/math/py-openTSNE/files/patch-pyproject.toml
new file mode 100644
index 000000000000..fb36163b013f
--- /dev/null
+++ b/math/py-openTSNE/files/patch-pyproject.toml
@@ -0,0 +1,7 @@
+--- pyproject.toml.orig 2023-02-22 15:31:53 UTC
++++ pyproject.toml
+@@ -1,3 +1,3 @@
+ [build-system]
+-requires = ["setuptools", "wheel", "cython", "oldest-supported-numpy"]
++requires = ["setuptools", "wheel", "cython", "numpy"]
+ build-backend = "setuptools.build_meta"