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authorYuri Victorovich <yuri@FreeBSD.org>2026-08-04 19:02:34 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2026-08-04 20:10:26 +0000
commit28ff77c2553d31d6304917f1856f9831da6f0d08 (patch)
tree894d6a16ac1ce3eeb3a4412c9641126b7f2b3a14
parent6a0f9b4992e5a2f5bac4958c0e9413f990aa8e5c (diff)
math/py-arviz-base: update 1.1.0 → 1.2.0
-rw-r--r--math/py-arviz-base/Makefile21
-rw-r--r--math/py-arviz-base/distinfo6
-rw-r--r--math/py-arviz-base/files/patch-pyproject.toml4
-rw-r--r--math/py-arviz-base/files/patch-src_arviz__base_____init____.py51
4 files changed, 67 insertions, 15 deletions
diff --git a/math/py-arviz-base/Makefile b/math/py-arviz-base/Makefile
index 5ca5aa25dd29..55d711074964 100644
--- a/math/py-arviz-base/Makefile
+++ b/math/py-arviz-base/Makefile
@@ -1,7 +1,6 @@
PORTNAME= arviz-base
DISTVERSIONPREFIX= v
-DISTVERSION= 1.1.0
-PORTREVISION= 1
+DISTVERSION= 1.2.0
CATEGORIES= math python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -14,12 +13,13 @@ LICENSE= APACHE20
LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}flit-core>0:devel/py-flit-core@${PY_FLAVOR}
-RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.26.4:math/py-numpy@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}xarray>=2024.11.0:devel/py-xarray@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}typing-extensions>=3.10:devel/py-typing-extensions@${PY_FLAVOR}
-TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest-cov>0:devel/py-pytest-cov@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}h5netcdf>0:science/py-h5netcdf@${PY_FLAVOR}
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}lazy_loader>=0.4:devel/py-lazy_loader@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}numpy>=2:math/py-numpy@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}typing-extensions>=3.10:devel/py-typing-extensions@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}xarray>=2024.11.0:devel/py-xarray@${PY_FLAVOR}
+TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}h5netcdf>0:science/py-h5netcdf@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}pytest-cov>0:devel/py-pytest-cov@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}
USES= python
USE_PYTHON= pep517 concurrent autoplist pytest
@@ -29,9 +29,10 @@ GH_ACCOUNT= arviz-devs
NO_ARCH= yes
-TEST_ARGS= -p no:benchmark -p no:xdist -p no:relaxed
+TEST_ARGS= -p no:benchmark -p no:xdist -p no:relaxed \
+ -p no:black -p no:ruff -p no:mypy -p no:flake8 -p no:cov
TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
-# tests as of 1.0.0: 208 passed in 1.62s
+# tests as of 1.2.0: 241 passed in 1.97s
.include <bsd.port.mk>
diff --git a/math/py-arviz-base/distinfo b/math/py-arviz-base/distinfo
index ac9a536c6462..8d2c164e6462 100644
--- a/math/py-arviz-base/distinfo
+++ b/math/py-arviz-base/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1777008328
-SHA256 (arviz-devs-arviz-base-v1.1.0_GH0.tar.gz) = 1e24f9983df297112a7040cd0b58f28b156c8bd86e2fb0027e4953b5c8eb3a15
-SIZE (arviz-devs-arviz-base-v1.1.0_GH0.tar.gz) = 2548678
+TIMESTAMP = 1785732617
+SHA256 (arviz-devs-arviz-base-v1.2.0_GH0.tar.gz) = dcd288f3c2a3703c8b02333875c331d3158afb185a3b4c1e503ca0b2cf8f0881
+SIZE (arviz-devs-arviz-base-v1.2.0_GH0.tar.gz) = 2663518
diff --git a/math/py-arviz-base/files/patch-pyproject.toml b/math/py-arviz-base/files/patch-pyproject.toml
index 02ed539d55fb..722d78dceb1d 100644
--- a/math/py-arviz-base/files/patch-pyproject.toml
+++ b/math/py-arviz-base/files/patch-pyproject.toml
@@ -1,4 +1,4 @@
---- pyproject.toml.orig 2026-04-17 15:46:57 UTC
+--- pyproject.toml.orig 2026-06-12 15:47:52 UTC
+++ pyproject.toml
@@ -5,7 +5,7 @@ readme = "README.md"
[project]
@@ -17,4 +17,4 @@
+ "numpy>=1.26.4",
"xarray>=2024.11.0",
"typing-extensions>=3.10",
- ]
+ "lazy_loader>=0.4",
diff --git a/math/py-arviz-base/files/patch-src_arviz__base_____init____.py b/math/py-arviz-base/files/patch-src_arviz__base_____init____.py
new file mode 100644
index 000000000000..ec3effd5d1d9
--- /dev/null
+++ b/math/py-arviz-base/files/patch-src_arviz__base_____init____.py
@@ -0,0 +1,51 @@
+-- Defer the numpyro converter imports until they are actually accessed, so that
+-- importing arviz_base does not require jax/jaxlib. jaxlib is not available
+-- as a usable package in FreeBSD Ports, and these converters are optional.
+--- src/arviz_base/__init__.py.orig 2026-06-12 15:47:52 UTC
++++ src/arviz_base/__init__.py
+@@ -13,14 +13,26 @@ from arviz_base.io_emcee import from_emcee
+ from arviz_base.io_cmdstanpy import from_cmdstanpy
+ from arviz_base.io_dict import from_dict
+ from arviz_base.io_emcee import from_emcee
+-from arviz_base.io_numpyro import (
+- from_numpyro,
+- from_numpyro_svi,
+- NumPyroInferenceAdapter,
+- SVIAdapter,
+- MCMCAdapter,
+-)
+ from arviz_base.io_pystan import from_pystan
++
++
++def __getattr__(name):
++ if name in {
++ "from_numpyro",
++ "from_numpyro_svi",
++ "NumPyroInferenceAdapter",
++ "SVIAdapter",
++ "MCMCAdapter",
++ }:
++ from arviz_base.io_numpyro import (
++ from_numpyro,
++ from_numpyro_svi,
++ NumPyroInferenceAdapter,
++ SVIAdapter,
++ MCMCAdapter,
++ )
++ return locals()[name]
++ raise AttributeError(f"module {__name__!r} has no attribute {name!r}")
+ from arviz_base.rcparams import rc_context, rcParams
+ from arviz_base.reorg import (
+ extract,
+@@ -54,11 +66,6 @@ __all__ = [
+ "from_cmdstanpy",
+ "from_dict",
+ "from_emcee",
+- "from_numpyro",
+- "from_numpyro_svi",
+- "NumPyroInferenceAdapter",
+- "SVIAdapter",
+- "MCMCAdapter",
+ # labels submodule
+ "labels",
+ # rcparams