diff options
| author | Yuri Victorovich <yuri@FreeBSD.org> | 2022-05-24 22:38:23 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2022-05-24 22:39:38 +0000 |
| commit | 2c5f8b153e090e52431cd867616f6a58dc73d1a5 (patch) | |
| tree | ebb52155612135233d04d0e8d25f54529f946389 | |
| parent | ce86b47476939383fa284f730c9951160db75962 (diff) | |
biology/gatk: Use Java 17 instead of EOLed Java 12
| -rw-r--r-- | biology/gatk/Makefile | 3 | ||||
| -rw-r--r-- | biology/gatk/distinfo | 6 |
2 files changed, 5 insertions, 4 deletions
diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile index 9e4672363cc2..2aeee40d3c31 100644 --- a/biology/gatk/Makefile +++ b/biology/gatk/Makefile @@ -1,5 +1,6 @@ PORTNAME= gatk DISTVERSION= 4.2.6.1 +PORTREVISION= 1 CATEGORIES= biology java EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX} @@ -16,7 +17,7 @@ BUILD_DEPENDS= gradle:devel/gradle USES= gettext-runtime USE_JAVA= yes -JAVA_VERSION= 12 # Java 8 fails on aarch64: Internal Error (assembler_aarch64.hpp:237), pid=76025, tid=0x000000000006e359 guarantee(val < (1U << nbits)) failed: Field too big for insn +JAVA_VERSION= 17 # Java 8 fails on aarch64: Internal Error (assembler_aarch64.hpp:237), pid=76025, tid=0x000000000006e359 guarantee(val < (1U << nbits)) failed: Field too big for insn USE_GITHUB= yes GH_ACCOUNT= broadinstitute diff --git a/biology/gatk/distinfo b/biology/gatk/distinfo index 59042632fd71..12330837aa1a 100644 --- a/biology/gatk/distinfo +++ b/biology/gatk/distinfo @@ -1,5 +1,5 @@ -TIMESTAMP = 1653271029 -SHA256 (gatk-4.2.6.1-deps.tar.gz) = 29c953f5e4ced2c06115d0f1ec8a501a5f17d0ed07337654249732680851c880 -SIZE (gatk-4.2.6.1-deps.tar.gz) = 545446960 +TIMESTAMP = 1653429535 +SHA256 (gatk-4.2.6.1-deps.tar.gz) = 6973e6a8ba1292b14c8238d7c831b1d9998c770f0f515881ed335c1de58a5ca2 +SIZE (gatk-4.2.6.1-deps.tar.gz) = 545456297 SHA256 (broadinstitute-gatk-4.2.6.1_GH0.tar.gz) = 248cefeaf3ea62ad672ff6402d82631e8b85a03d019c29bbb44d842f799dda67 SIZE (broadinstitute-gatk-4.2.6.1_GH0.tar.gz) = 92503297 |