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authorYuri Victorovich <yuri@FreeBSD.org>2023-11-05 21:29:48 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2023-11-05 23:07:54 +0000
commit682788bfb9fe00bbe6809f5f181960e9a0622a73 (patch)
tree245ed041b17c7495491184f063f5668a0a7c79ed
parent2081d5e314b68d7f51be7a585de930a1825117d3 (diff)
downloadports-682788bfb9fe00bbe6809f5f181960e9a0622a73.tar.gz
ports-682788bfb9fe00bbe6809f5f181960e9a0622a73.zip
biology/py-pyrodigal: update 2.2.0 → 3.1.0
Reported by: portscout
-rw-r--r--biology/py-pyrodigal/Makefile7
-rw-r--r--biology/py-pyrodigal/distinfo6
2 files changed, 7 insertions, 6 deletions
diff --git a/biology/py-pyrodigal/Makefile b/biology/py-pyrodigal/Makefile
index 57851ce5ca77..4bc45f824e17 100644
--- a/biology/py-pyrodigal/Makefile
+++ b/biology/py-pyrodigal/Makefile
@@ -1,5 +1,5 @@
PORTNAME= pyrodigal
-DISTVERSION= 2.2.0
+DISTVERSION= 3.1.0
CATEGORIES= biology python
MASTER_SITES= PYPI
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -11,10 +11,11 @@ WWW= https://github.com/althonos/pyrodigal
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/COPYING
+BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cython3>0:lang/cython3@${PY_FLAVOR}
TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}archspec>0:devel/py-archspec@${PY_FLAVOR}
USES= python
-USE_PYTHON= distutils cython concurrent autoplist pytest
+USE_PYTHON= distutils concurrent autoplist pytest # cython: cython3 isn't yet supported by python.mk
TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
@@ -22,7 +23,7 @@ post-build:
@cd ${BUILD_WRKSRC} && ${SETENV} ${MAKE_ENV} ${PYTHON_CMD} setup.py build_ext --inplace
post-install:
- @${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pyrodigal/_pyrodigal${PYTHON_EXT_SUFFIX}.so
+ @${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/pyrodigal/lib${PYTHON_EXT_SUFFIX}.so
do-test:
@cd ${TEST_WRKSRC} && ${SETENV} ${TEST_ENV} ${PYTHON_CMD} -m unittest discover -vv
diff --git a/biology/py-pyrodigal/distinfo b/biology/py-pyrodigal/distinfo
index 3d9568247704..af04cbf6885f 100644
--- a/biology/py-pyrodigal/distinfo
+++ b/biology/py-pyrodigal/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1687795505
-SHA256 (pyrodigal-2.2.0.tar.gz) = d516577aa6f8177af20d176c0757bbce17361dafb5cffc28b2a32cff1256c325
-SIZE (pyrodigal-2.2.0.tar.gz) = 2566003
+TIMESTAMP = 1699216998
+SHA256 (pyrodigal-3.1.0.tar.gz) = efc01ca72e798efd07a8e79209c92b518f9f403e98012d01eca37fe2416487df
+SIZE (pyrodigal-3.1.0.tar.gz) = 2572979