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authorYuri Victorovich <yuri@FreeBSD.org>2023-07-26 05:59:37 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2023-07-26 06:20:27 +0000
commitc47b62f07513ab8bc9d71c915e4391b31e32ac02 (patch)
treeff68740318a2d3cb34f87eff57328bb65c1caf45
parent2b7078efd2af481bff974a1b32e2be3b8a809e70 (diff)
misc/py-anndata: Re-add port: Annotated multivariate observation data
-rw-r--r--misc/Makefile1
-rw-r--r--misc/py-anndata/Makefile30
-rw-r--r--misc/py-anndata/distinfo3
-rw-r--r--misc/py-anndata/pkg-descr2
4 files changed, 36 insertions, 0 deletions
diff --git a/misc/Makefile b/misc/Makefile
index 747b20b246ae..d308e8be8249 100644
--- a/misc/Makefile
+++ b/misc/Makefile
@@ -396,6 +396,7 @@
SUBDIR += py-SimpleSoapy
SUBDIR += py-SoapySDR
SUBDIR += py-alive-progress
+ SUBDIR += py-anndata
SUBDIR += py-apache-beam
SUBDIR += py-ascii-magic
SUBDIR += py-boost-histogram
diff --git a/misc/py-anndata/Makefile b/misc/py-anndata/Makefile
new file mode 100644
index 000000000000..b351b11c862e
--- /dev/null
+++ b/misc/py-anndata/Makefile
@@ -0,0 +1,30 @@
+PORTNAME= anndata
+DISTVERSION= 0.9.2
+CATEGORIES= misc python
+MASTER_SITES= CHEESESHOP
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER= yuri@FreeBSD.org
+COMMENT= Annotated multivariate observation data
+WWW= https://github.com/theislab/anndata
+
+LICENSE= BSD3CLAUSE
+LICENSE_FILE= ${WRKSRC}/LICENSE
+
+PY_DEPENDS= ${PYTHON_PKGNAMEPREFIX}h5py>=3:science/py-h5py@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}natsort>0:devel/py-natsort@${PY_FLAVOR} \
+ ${PYNUMPY} \
+ ${PYTHON_PKGNAMEPREFIX}packaging>=20:devel/py-packaging@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}pandas>=1.1.1:math/py-pandas@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}scipy>1.4:science/py-scipy@${PY_FLAVOR}
+BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}flit-core>=3.4:devel/py-flit-core@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} \
+ ${PY_DEPENDS}
+RUN_DEPENDS= ${PY_DEPENDS}
+
+USES= python:3.8+
+USE_PYTHON= pep517 autoplist
+
+NO_ARCH= yes
+
+.include <bsd.port.mk>
diff --git a/misc/py-anndata/distinfo b/misc/py-anndata/distinfo
new file mode 100644
index 000000000000..44ce294abd5f
--- /dev/null
+++ b/misc/py-anndata/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1690347364
+SHA256 (anndata-0.9.2.tar.gz) = e5b8383d09723af674cae7ad0c2ef53eb1f8c73949b7f4c182a6e30f42196327
+SIZE (anndata-0.9.2.tar.gz) = 93755
diff --git a/misc/py-anndata/pkg-descr b/misc/py-anndata/pkg-descr
new file mode 100644
index 000000000000..c241084f6fea
--- /dev/null
+++ b/misc/py-anndata/pkg-descr
@@ -0,0 +1,2 @@
+AnnData provides a scalable way of keeping track of data and learned
+annotations.