diff options
| author | Älven <alven@FreeBSD.org> | 2026-08-18 21:26:53 +0000 |
|---|---|---|
| committer | Älven <alven@FreeBSD.org> | 2026-08-19 06:14:20 +0000 |
| commit | c944bb75f84c1f9b908850e36c1c975d6fe3cbaa (patch) | |
| tree | 34148d953d71afc0bcbf758bf5c2e67c1b53df59 | |
| parent | 460aef600cd82b5d72cf711872450b64b136d51a (diff) | |
biology/exonerate: Improve port, take maintainership
* Use https:// scheme for MASTER_SITES
* Improve COMMENT
* Pet portclippy(1) and portfmt(1)
* Sort pkg-plist
Approved by: db@, yuri@ (Mentors, implicit)
MFH: 2026Q3
(cherry picked from commit f56b7548526c1889a79deb79409a6be25a0de319)
| -rw-r--r-- | biology/exonerate/Makefile | 16 | ||||
| -rw-r--r-- | biology/exonerate/pkg-plist | 12 |
2 files changed, 14 insertions, 14 deletions
diff --git a/biology/exonerate/Makefile b/biology/exonerate/Makefile index 68a85ac66efb..15ed3eb18e90 100644 --- a/biology/exonerate/Makefile +++ b/biology/exonerate/Makefile @@ -1,22 +1,22 @@ PORTNAME= exonerate -PORTVERSION= 2.4.0 -PORTREVISION= 1 +DISTVERSION= 2.4.0 +PORTREVISION= 2 CATEGORIES= biology -MASTER_SITES= http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/ +MASTER_SITES= https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/ -MAINTAINER= ports@FreeBSD.org -COMMENT= Generic tool for sequence alignment +MAINTAINER= alven@FreeBSD.org +COMMENT= Generic tool for biological sequence alignment WWW= https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING USES= gnome pkgconfig -GNU_CONFIGURE= yes -GNU_CONFIGURE_MANPREFIX=${PREFIX}/share USE_GNOME= glib20 -TEST_TARGET= check + +GNU_CONFIGURE= yes MAKE_JOBS_UNSAFE= yes +TEST_TARGET= check .include <bsd.port.mk> diff --git a/biology/exonerate/pkg-plist b/biology/exonerate/pkg-plist index 883b4fac0f38..7b6019ec1c70 100644 --- a/biology/exonerate/pkg-plist +++ b/biology/exonerate/pkg-plist @@ -1,9 +1,11 @@ +bin/esd2esi bin/exonerate -bin/ipcress bin/exonerate-server +bin/fasta2esd +bin/fastaannotatecdna +bin/fastachecksum bin/fastaclean bin/fastaclip -bin/fastachecksum bin/fastacomposition bin/fastadiff bin/fastaexplode @@ -22,10 +24,8 @@ bin/fastasplit bin/fastasubseq bin/fastatranslate bin/fastavalidcds -bin/fasta2esd -bin/fastaannotatecdna -bin/esd2esi +bin/ipcress share/man/man1/exonerate-server.1.gz -share/man/man1/fastautils.1.gz share/man/man1/exonerate.1.gz +share/man/man1/fastautils.1.gz share/man/man1/ipcress.1.gz |