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| author | Fernando Apesteguía <fernape@FreeBSD.org> | 2021-06-13 14:25:33 +0000 |
|---|---|---|
| committer | Fernando Apesteguía <fernape@FreeBSD.org> | 2021-06-16 07:48:05 +0000 |
| commit | de8f362148ee5793194ae5b8d4ec9c20f53cbc6f (patch) | |
| tree | 1b857c84b27e461930ba7bf9fd65159fb7f383e0 | |
| parent | ef4bd749780b5797afacd35f3db1db9c00bc4ce2 (diff) | |
| download | ports-de8f362148ee5793194ae5b8d4ec9c20f53cbc6f.tar.gz ports-de8f362148ee5793194ae5b8d4ec9c20f53cbc6f.zip | |
science/afni: update to 21.1.12
| -rw-r--r-- | science/afni/Makefile | 2 | ||||
| -rw-r--r-- | science/afni/distinfo | 6 | ||||
| -rw-r--r-- | science/afni/files/patch-crorden_dcm2niix__console_makefile | 22 | ||||
| -rw-r--r-- | science/afni/pkg-plist | 2 |
4 files changed, 19 insertions, 13 deletions
diff --git a/science/afni/Makefile b/science/afni/Makefile index cbdd32d54c16..38412036cef6 100644 --- a/science/afni/Makefile +++ b/science/afni/Makefile @@ -1,6 +1,6 @@ PORTNAME= afni DISTVERSIONPREFIX= AFNI_ -DISTVERSION= 21.1.09 +DISTVERSION= 21.1.12 CATEGORIES= science biology graphics perl5 python MAINTAINER= fernape@FreeBSD.org diff --git a/science/afni/distinfo b/science/afni/distinfo index a9c993cf7ea9..f186b133d390 100644 --- a/science/afni/distinfo +++ b/science/afni/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1622390715 -SHA256 (afni-afni-AFNI_21.1.09_GH0.tar.gz) = 50c038f18d7c49db0d046c2a12b98907a36662e558d8628f299800051b341057 -SIZE (afni-afni-AFNI_21.1.09_GH0.tar.gz) = 43377177 +TIMESTAMP = 1623748135 +SHA256 (afni-afni-AFNI_21.1.12_GH0.tar.gz) = b390c6acf44c36fb5a9f7a58d71dd34d8abd429640fe4238c99967521e6d8492 +SIZE (afni-afni-AFNI_21.1.12_GH0.tar.gz) = 43443451 diff --git a/science/afni/files/patch-crorden_dcm2niix__console_makefile b/science/afni/files/patch-crorden_dcm2niix__console_makefile index c20e41c355ea..7816c4ff42c5 100644 --- a/science/afni/files/patch-crorden_dcm2niix__console_makefile +++ b/science/afni/files/patch-crorden_dcm2niix__console_makefile @@ -1,4 +1,4 @@ ---- crorden/dcm2niix_console/makefile.orig 2019-05-12 14:54:20 UTC +--- crorden/dcm2niix_console/makefile.orig 2021-06-15 02:26:33 UTC +++ crorden/dcm2niix_console/makefile @@ -1,8 +1,8 @@ # Regular use @@ -9,14 +9,18 @@ -#CFLAGS=-g +#CXXFLAGS=-g - #run "make" for default build - #run "JPEGLS=1 make" for JPEGLS build -@@ -14,8 +14,8 @@ endif - ifneq ($(OS),Windows_NT) - OS = $(shell uname) - ifeq "$(OS)" "Darwin" -- CFLAGS=-dead_strip -O3 -+ CXXFLAGS=-dead_strip -O3 + #Leak tests: + # https://clang.llvm.org/docs/AddressSanitizer.html +@@ -23,7 +23,7 @@ ifneq ($(OS),Windows_NT) + #CFLAGS= -O3 + # CFLAGS=-O3 -sectcreate __TEXT __info_plist Info.plist + # rickr - ponder -sectcreate later +- CFLAGS=-O3 ++ CXXFLAGS=-O3 + #Apple notarization requires a Info.plist + # For .app bundles, the Info.plist is a separate file, for executables it is appended as a section + #you can check that the Info.plist section has been inserted with either of these commands +@@ -33,4 +33,4 @@ ifneq ($(OS),Windows_NT) endif endif all: diff --git a/science/afni/pkg-plist b/science/afni/pkg-plist index d3500404f35e..c6ebae5a08b1 100644 --- a/science/afni/pkg-plist +++ b/science/afni/pkg-plist @@ -36,6 +36,7 @@ bin/2dcat bin/2perm bin/2swap bin/3dABoverlap +bin/3dmaxdisp bin/3dAFNIto3D bin/3dAFNItoANALYZE bin/3dAFNItoNIFTI @@ -463,6 +464,7 @@ bin/SurfDsetInfo bin/SurfExtrema bin/SurfFWHM bin/SurfInfo +bin/SurfLocalstat bin/SurfMeasures bin/SurfPatch bin/SurfQual |