diff options
| author | Yuri Victorovich <yuri@FreeBSD.org> | 2022-10-04 02:38:26 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2022-10-04 02:40:28 +0000 |
| commit | fdff0a76080203275164e33d8892f6b2f9f0788d (patch) | |
| tree | fb6d28631255eca3995d1e2eb124fbc1ff0232bc | |
| parent | 6d3f32a7b149e669e3023ba4e244c073d1f01746 (diff) | |
science/dssp: New port: Application to assign secondary structure to proteins
| -rw-r--r-- | science/Makefile | 1 | ||||
| -rw-r--r-- | science/dssp/Makefile | 25 | ||||
| -rw-r--r-- | science/dssp/distinfo | 3 | ||||
| -rw-r--r-- | science/dssp/pkg-descr | 4 |
4 files changed, 33 insertions, 0 deletions
diff --git a/science/Makefile b/science/Makefile index 97d726fb641f..a05b9a0a20e2 100644 --- a/science/Makefile +++ b/science/Makefile @@ -74,6 +74,7 @@ SUBDIR += dkh SUBDIR += dlib-cpp SUBDIR += drawxtl + SUBDIR += dssp SUBDIR += dvc SUBDIR += dwave-preprocessing SUBDIR += dynare diff --git a/science/dssp/Makefile b/science/dssp/Makefile new file mode 100644 index 000000000000..b1051eb1f8fb --- /dev/null +++ b/science/dssp/Makefile @@ -0,0 +1,25 @@ +PORTNAME= dssp +DISTVERSIONPREFIX= v +DISTVERSION= 4.0.5 +CATEGORIES= science + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Application to assign secondary structure to proteins +WWW= https://github.com/PDB-REDO/dssp + +LICENSE= BSD2CLAUSE +LICENSE_FILE= ${WRKSRC}/LICENSE + +BUILD_DEPENDS= mrc:devel/mrc +LIB_DEPENDS= libboost_iostreams.so:devel/boost-libs \ + libcifpp.so:science/libcifpp + +USES= cmake:noninja compiler:c++17-lang # ninja breaks when mrc is present + +USE_GITHUB= yes +GH_ACCOUNT= PDB-REDO + +PLIST_FILES= bin/mkdssp \ + share/man/man1/mkdssp.1.gz + +.include <bsd.port.mk> diff --git a/science/dssp/distinfo b/science/dssp/distinfo new file mode 100644 index 000000000000..7f22289fb6f3 --- /dev/null +++ b/science/dssp/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1664849148 +SHA256 (PDB-REDO-dssp-v4.0.5_GH0.tar.gz) = 759f8fd32c57dfc7c3eed5535d3bc04db13f7de1a5deda8862cebfafcbca84b0 +SIZE (PDB-REDO-dssp-v4.0.5_GH0.tar.gz) = 123019 diff --git a/science/dssp/pkg-descr b/science/dssp/pkg-descr new file mode 100644 index 000000000000..2dd64408795f --- /dev/null +++ b/science/dssp/pkg-descr @@ -0,0 +1,4 @@ +dssp-4 is a rewrite of DSSP, now offering full mmCIF support. The difference +with previous releases of DSSP is that it now writes out an annotated mmCIF +file by default, storing the secondary structure information in the +_struct_conf category. |