diff options
Diffstat (limited to 'biology/bolt-lmm/Makefile')
| -rw-r--r-- | biology/bolt-lmm/Makefile | 15 |
1 files changed, 7 insertions, 8 deletions
diff --git a/biology/bolt-lmm/Makefile b/biology/bolt-lmm/Makefile index 74284124e40a..dd722911809a 100644 --- a/biology/bolt-lmm/Makefile +++ b/biology/bolt-lmm/Makefile @@ -1,12 +1,13 @@ PORTNAME= bolt-lmm -DISTVERSION= 2.3.4 -PORTREVISION= 4 +DISTVERSION= 2.3.6 +PORTREVISION= 8 CATEGORIES= biology MASTER_SITES= https://data.broadinstitute.org/alkesgroup/BOLT-LMM/downloads/ DISTNAME= BOLT-LMM_v${PORTVERSION} MAINTAINER= jwb@FreeBSD.org COMMENT= Mixed model association testing and variance component analysis +WWW= https://data.broadinstitute.org/alkesgroup/BOLT-LMM/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/license.txt @@ -15,16 +16,12 @@ LIB_DEPENDS= libnlopt.so:math/nlopt \ libopenblas.so:math/openblas \ libboost_program_options.so:devel/boost-libs -# gcc-c++11-lib needed to link with boost. Also requires compiler:openmp, but -# both merely add a GCC requirement. -USES= compiler:gcc-c++11-lib gmake +USES= gmake BUILD_WRKSRC= ${WRKDIR}/${DISTNAME}/src INSTALL_WRKSRC= ${WRKDIR}/${DISTNAME}/src CXXFLAGS_i386= -DUSE_SSE -msse -msse2 CXXFLAGS_amd64= -DUSE_SSE -CXXFLAGS_powerpc64= -DNO_WARN_X86_INTRINSICS -mvsx -CXXFLAGS_powerpc64le= -DNO_WARN_X86_INTRINSICS -mvsx MAKE_ARGS= BOOST_INSTALL_DIR=${LOCALBASE} \ NLOPT_INSTALL_DIR=${LOCALBASE} \ ZLIB_STATIC_DIR=/usr/lib \ @@ -32,7 +29,9 @@ MAKE_ARGS= BOOST_INSTALL_DIR=${LOCALBASE} \ GLIBC_STATIC_DIR=/usr/lib \ SSEFLAGS="" \ MEMCPY="" \ - LLAPACK="-lopenblas -lgfortran" + LLAPACK="-lopenblas" + +CONFLICTS_INSTALL= rubygem-bolt # bin/bolt PORTEXAMPLES= * |