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-rw-r--r--biology/jalview/Makefile11
-rw-r--r--biology/jalview/distinfo10
-rw-r--r--biology/jalview/pkg-descr2
3 files changed, 10 insertions, 13 deletions
diff --git a/biology/jalview/Makefile b/biology/jalview/Makefile
index 7b7581d2b320..5b1a44b7f8bc 100644
--- a/biology/jalview/Makefile
+++ b/biology/jalview/Makefile
@@ -1,7 +1,5 @@
-# Created by: Fernan Aguero <fernan@iib.unsam.edu.ar>
-
PORTNAME= jalview
-DISTVERSION= 2.11.1.4
+DISTVERSION= 2.11.2.5
CATEGORIES= biology java
MASTER_SITES= https://www.jalview.org/source/
DISTNAME= ${PORTNAME}_${DISTVERSION:S/./_/g}
@@ -10,11 +8,12 @@ EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX}
MAINTAINER= yuri@FreeBSD.org
COMMENT= Viewer and editor for multiple sequence alignments
+WWW= https://www.jalview.org
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
-BUILD_DEPENDS= gradle:devel/gradle6
+BUILD_DEPENDS= gradle761:devel/gradle761
USE_JAVA= yes
JAVA_VERSION= 11
@@ -59,13 +58,13 @@ PLIST_FILES= bin/jalview \
${DATADIR}/jalview.jar
do-build:
- @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
+ @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle761 \
--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
${GRADLE_ARGS} --build-cache shadowJar
do-install:
${INSTALL_SCRIPT} ${WRKDIR}/jalview.sh ${STAGEDIR}${PREFIX}/bin/jalview
@${MKDIR} ${STAGEDIR}${DATADIR}
- ${INSTALL_DATA} ${WRKSRC}/build/libs/jalview-all-${DISTVERSION}-j${JAVA_VERSION}.jar ${STAGEDIR}${DATADIR}/jalview.jar
+ ${INSTALL_DATA} ${WRKSRC}/build/libs/jalview-all-TEST-j11.jar ${STAGEDIR}${DATADIR}/jalview.jar
.include <bsd.port.mk>
diff --git a/biology/jalview/distinfo b/biology/jalview/distinfo
index 1a5fba7ea4d9..66576f639c72 100644
--- a/biology/jalview/distinfo
+++ b/biology/jalview/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1619390838
-SHA256 (jalview_2_11_1_4.tar.gz) = 30c0a89bbaf58bc5fd15fd7b167768d21cda1431676f28e22669fd5a342396eb
-SIZE (jalview_2_11_1_4.tar.gz) = 103154170
-SHA256 (jalview-2.11.1.4-deps.tar.gz) = 93e88557841d295146aa5f9144e22a8774c9699c9a6a43a4a25673148d91c7d9
-SIZE (jalview-2.11.1.4-deps.tar.gz) = 21061379
+TIMESTAMP = 1665557435
+SHA256 (jalview_2_11_2_5.tar.gz) = dcb7211fe55db9b598281f2025787defdfbe8ce048141df7c38501ad4554c998
+SIZE (jalview_2_11_2_5.tar.gz) = 211101247
+SHA256 (jalview-2.11.2.5-deps.tar.gz) = 9eff680720f3f56f9d07f8b416c63d5460220f0562471e7c796cc28dce3b5182
+SIZE (jalview-2.11.2.5-deps.tar.gz) = 88745285
diff --git a/biology/jalview/pkg-descr b/biology/jalview/pkg-descr
index f8f1378b879d..5e06e95e9ced 100644
--- a/biology/jalview/pkg-descr
+++ b/biology/jalview/pkg-descr
@@ -18,5 +18,3 @@ o User predefined or custom colour schemes to colour alignments or groups.
o Sequence feature retrieval and display on the alignment.
o Print your alignment with colours and annotations.
o Output alignments as HTML pages, images (PNG) or postscript (EPS).
-
-WWW: https://www.jalview.org