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* textproc/libxml2: bump all LIB_DEPENDS consumersCharlie Li2022-04-105-5/+5
* */*: fix trailing whitespace in pkg-descr'sDmitry Marakasov2022-04-011-1/+1
* devel/grpc: Update to 1.45.0Po-Chuan Hsieh2022-03-301-1/+1
* */*: Bump PORTREVISION after lang/go 1.18 updateGuangyuan Yang2022-03-304-1/+4
* textproc/libxml2: bump all dependenciesMatthias Fechner2022-03-265-1/+5
* biology/py-ont-fast5-api: Update to 4.0.2Jason W. Bacon2022-03-253-5/+16
* biology/python-nexus: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-251-0/+19
* biology/py-crossmap: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-251-0/+2955
* biology/groopm: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-251-0/+3414
* biology/checkm: Fix build with setuptools 58.0.0+Po-Chuan Hsieh2022-03-252-1/+649
* biology/dsr-pdb: Remove -pg (mcount instrumentation) flagYuri Victorovich2022-03-222-2/+16
* biology/fastq-trim: Update to 0.1.1.4Jason W. Bacon2022-03-213-6/+6
* biology/fastq-trim: Update to 0.1.1.2Jason W. Bacon2022-03-214-7/+8
* biology/dsr-pdb: Broken on aarch64Yuri Victorovich2022-03-211-0/+2
* biology/biosig: Update 2.3.3 -> 2.4.0Yuri Victorovich2022-03-205-75/+5
* biology/bolt-lmm: Update to 2.3.6Jason W. Bacon2022-03-204-9/+30
* biology/fastq-trim: Lightening fast sequence read trimmerJason W. Bacon2022-03-195-0/+105
* biology/vcf2hap: Update to 0.1.5Jason W. Bacon2022-03-152-4/+4
* biology/vcf-split: Update to 0.1.4Jason W. Bacon2022-03-152-5/+4
* biology/peak-classifier: Update to 0.1.3Jason W. Bacon2022-03-152-4/+4
* biology/ad2vcf: Update to 0.1.5Jason W. Bacon2022-03-152-4/+4
* biology/biolibc-tools: Update to 0.1.2Jason W. Bacon2022-03-153-4/+9
* biology/biolibc: Update to 0.2.2Jason W. Bacon2022-03-153-16/+108
* biology/pooler: Update to 1.84Jason W. Bacon2022-03-142-4/+4
* biology/gffread: remove local poudriere filesRene Ladan2022-03-072-526/+0
* devel/grpc: Update to 1.44.0Po-Chuan Hsieh2022-03-071-1/+1
* devel/py-qt5, devel/py-sip: Update versionsLoïc Bartoletti2022-03-071-1/+1
* biology/py-loompy: Update 3.0.6 -> 3.0.7Yuri Victorovich2022-03-062-4/+7
* biology/{,py-}libsedml: Update 2.0.27 -> 2.0.28Yuri Victorovich2022-03-065-10/+10
* biology/py-PySCeS: fix with Python ≠ 3.8Thierry Thomas2022-03-021-2/+2
* biology/libsbml: Update WWWPo-Chuan Hsieh2022-02-281-1/+1
* biology/taxonkit: Update 0.9.0 -> 0.10.1Yuri Victorovich2022-02-272-6/+6
* biology/bio-mocha: Update bcftools submodule to 1.15Jason W. Bacon2022-02-262-4/+5
* biology/bcftools: Update to 1.15Jason W. Bacon2022-02-262-5/+4
* biology/samtools: Update to 1.15Jason W. Bacon2022-02-263-4/+6
* biology/htslib: Update to 1.15Jason W. Bacon2022-02-262-4/+4
* biology/py-PySCeS: Update 1.0.0 -> 1.0.1Yuri Victorovich2022-02-252-4/+4
* biology/hyphy: Fix build with clang 13.0.0Joseph Mingrone2022-02-213-0/+270
* biology/{,py-}libsedml: Update 2.0.26 -> 2.0.27Yuri Victorovich2022-02-176-19/+10
* biology/py-dna-features-viewer: Add missing dependencyJason W. Bacon2022-02-121-2/+3
* biology/pooler: update to 1.82Fernando Apesteguía2022-02-102-7/+6
* biology/freebayes: Update to 1.3.6Jason W. Bacon2022-02-062-30/+23
* Update CONFLICTS definitions in categories a* to c*Stefan Eßer2022-02-0614-4/+25
* biology/py-dna-features-viewer: Add py-bcbio-gff depJason W. Bacon2022-02-031-1/+3
* biology/py-bcbio-gff: Read and write Generic Feature Format (GFF)Jason W. Bacon2022-02-034-0/+24
* biology/py-dna-features-viewer: Python lib to visualize DNA featuresJason W. Bacon2022-02-033-0/+35
* biology/hyphy: Update to 2.5.36Joseph Mingrone2022-02-033-4/+6
* security/mbedtls: Update to 2.28.0 and fix make testTijl Coosemans2022-01-281-1/+1
* biology/vcflib: Update to 1.0.3Jason W. Bacon2022-01-283-108/+148
* biology/ngs-sdk: Update 2.11.1 -> 2.11.2Yuri Victorovich2022-01-273-7/+7
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