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* science/py-scikit-optimize: Update to 0.9.0Po-Chuan Hsieh2021-10-252-4/+4
| | | | Changes: https://github.com/scikit-optimize/scikit-optimize/releases
* science/py-pycsw: Update to 2.6.1Po-Chuan Hsieh2021-10-252-4/+4
| | | | | Changes: https://pycsw.org/development/announce/ https://github.com/geopython/pycsw/commits/master
* devel/grpc: Update to 1.41.0Po-Chuan Hsieh2021-10-251-1/+1
| | | | | | - Changes: https://github.com/grpc/grpc/releases
* */Makefile: Sort SUBDIRsPo-Chuan Hsieh2021-10-251-1/+1
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* Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.)Alexey Dokuchaev2021-10-252-2/+3
| | | | | | | | | ONLY_FOR_ARCHS_REASON is used as part of the sentence and thus should start with lower-case letter and not end with a period which is added by the framework, similar to other knobs like BROKEN, IGNORE, et al. While here, remove needless quoting, add missing Oxford comma, expand contractions and jargonisms, use correct spelling for proper names.
* science/py-tensorflow: enable on powerpc64lePiotr Kubaj2021-10-231-1/+1
| | | | Currently doesn't build, but fails with the same error that amd64 after 6 hours of building.
* science/py-pymatgen: Update 2022.0.14 -> 2022.0.15Yuri Victorovich2021-10-222-10/+14
| | | | Reported by: portscout
* science/dakota: fix build on non-x86Piotr Kubaj2021-10-221-0/+11
| | | | | | | | fpinit.c uses fpsetmask to workaround a bug that is not present since FreeBSD 4.0. This issue also affected Firefox and was resolved 9 years ago https://bugzilla.mozilla.org/show_bug.cgi?id=789436
* science/afni: fix build on non-x86Piotr Kubaj2021-10-222-2/+20
| | | | fpsetprec() is only on amd64 and i386 and requires x87 FPU. It's possible to build without x87, just how it's done on Linux.
* science/py-cirq-pasqal: Update 0.12.0 -> 0.13.0Yuri Victorovich2021-10-222-4/+4
| | | | Reported by: portscout
* science/py-OpenFermion: Update 1.1.0 -> 1.2.0Yuri Victorovich2021-10-222-5/+8
| | | | Reported by: portscout
* science/nest: Update 2.20.1 -> 3.1Yuri Victorovich2021-10-215-129/+680
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* science/sparta: Update 26Feb2021 -> 20Oct2021Yuri Victorovich2021-10-212-4/+4
| | | | Reported by: upstream notification
* science/shelxle: Update 1.0.1330 -> 1.0.1332Yuri Victorovich2021-10-212-4/+4
| | | | Reported by: portscout
* science/gnudatalanguage: upgrade to v1.0.1Thierry Thomas2021-10-203-55/+60
| | | | | | | - Release notes at <https://github.com/gnudatalanguage/gdl/releases/tag/v1.0.1> - Switch back to GraphicsMagick (preferred by upstream).
* science/nest: Mark the PYTHON option broken; Add the 'test' targetYuri Victorovich2021-10-201-3/+7
| | | | Reported by: Filippo Adamo <filippo.adamo@gmx.de> (broken python module)
* science/nwchem: Add the PYTHON option enabling python syntax in .nw filesYuri Victorovich2021-10-201-0/+8
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* *: apply refactor.remove-consecutive-empty-linesTobias Kortkamp2021-10-191-1/+0
| | | | Submitted by: portedit
* science/code_saturne: upgrade to 7.0.2Thierry Thomas2021-10-183-10/+13
| | | | | Changelog at <https://github.com/code-saturne/code_saturne/blob/v7.0/NEWS.md>.
* science/py-cirq-google: Update 0.12.0 -> 0.13.0Yuri Victorovich2021-10-172-5/+5
| | | | Reported by: portscout
* cience/orthanci: Update to 1.9.7Wen Heping2021-10-174-12/+14
| | | | | PR: 259145 Reported by: maintainer.freebsd@xpoundit.com(maintainer)
* science/py-qcengine: Update 0.19.0 -> 0.20.1; Add test targetYuri Victorovich2021-10-162-6/+15
| | | | Reported by: portscout
* science/py-pyberny: New port: Optimizer of molecular geometries with respect ↵Yuri Victorovich2021-10-164-0/+40
| | | | to the total energy
* science/py-qcelemental: Update 0.22.0 -> 0.23.0; Add test targetYuri Victorovich2021-10-162-4/+8
| | | | Reported by: portscout
* science/py-pymatgen: Update 2022.0.12 -> 2022.0.14Yuri Victorovich2021-10-162-4/+4
| | | | Reported by: portscout
* science/shelxle: Update 1.0.1328 -> 1.0.1330Yuri Victorovich2021-10-162-4/+4
| | | | Reported by: portscout
* science/libcint: Update 4.4.4 -> 4.4.6Yuri Victorovich2021-10-162-4/+4
| | | | Reported by: portscout
* *: fix tab vs. space issues, and comments according to the guide.Jimmy Olgeni2021-10-161-1/+1
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* science/orthanc-dicomweb: Update to 1.7Frank Scholl2021-10-152-5/+6
| | | | | | ChangeLog: https://hg.orthanc-server.com/orthanc-dicomweb/file/default/NEWS PR: 259144
* science/orthanc-mysql: Update to 4.3Frank Scholl2021-10-152-7/+9
| | | | | | | ChangeLog: https://hg.orthanc-server.com/orthanc-databases/file/default/MySQL/NEWS PR: 259143
* science/py-pycsw: Add CPE informationStefan Eßer2021-10-141-1/+1
| | | | Approved by: portmgr (blanket)
* science/py-gsd: Update 2.4.2 -> 2.5.0Yuri Victorovich2021-10-142-4/+4
| | | | Reported by: portscout
* science/py-tensorflow: Add CPE informationStefan Eßer2021-10-141-1/+2
| | | | Approved by: portmgr (blanket)
* science/hdf5-18: Add CPE informationStefan Eßer2021-10-141-1/+2
| | | | Approved by: portmgr (blanket)
* science/hdf5: Add CPE informationStefan Eßer2021-10-141-2/+2
| | | | Approved by: portmgr (blanket)
* science/rubygem-rgeo-proj4: Update to 3.1.0Po-Chuan Hsieh2021-10-132-4/+4
| | | | Changes: https://github.com/rgeo/rgeo-proj4/blob/master/History.md
* science/openmc: Unbreak LIBMESH option by switching to mpichYuri Victorovich2021-10-121-4/+4
| | | | As it turned out LibMesh fails to compile with OpenMPI-{3,4}
* science/py-tensorflow: fix build on powerpc64Piotr Kubaj2021-10-123-3/+59
| | | | | | | The bundled abseil needs the same patch that was already upstreamed. Approved by: portmgr (blanket: build fix) PR: 259082
* *: Clean up some thingsTobias Kortkamp2021-10-122-3/+1
| | | | | | | | | | | | - Fix typos - Fix overwritten variables with focus on master/slave ports - Remove unreferenced variables - Sort categories - Remove redundant option descriptions - Clean up commented PORTREVISION - Add missing USES Reported by: portscan
* science/py-pydicom: Update to 2.2.2Wen Heping2021-10-122-4/+4
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* science/afni: update to 21.3.00Fernando Apesteguía2021-10-112-4/+4
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* science/tinker: Update 8.9.5 -> 8.10.1Yuri Victorovich2021-10-113-4/+5
| | | | Reported by: portscout
* science/py-OpenMC: New port: Monte Carlo neutron and photon transport ↵Yuri Victorovich2021-10-114-0/+57
| | | | simulation code (Python)
* science/openmc: New port: Monte Carlo neutron and photon transport ↵Yuri Victorovich2021-10-116-0/+225
| | | | simulation code
* INSTALLS_ICONS: retire the macro and rework the related dependenciesBaptiste Daroussin2021-10-107-7/+0
| | | | | | | While here, make sure gtk-update-icon-cache is only on run dependency where added as a dependency Enforce gtk3 to depend on gtk-update-icon-cache (previously it was inheriting the dependency)
* science/py-PyNE: Add the moab dependency; Install the nuc_data.h5 file; ↵Yuri Victorovich2021-10-103-6/+23
| | | | Build in parallel
* science/py-netCDF4: Update version 1.3.1=>1.5.7Wen Heping2021-10-102-9/+8
| | | | | | PR: 259042 Reported by: wen Relnotes: https://github.com/Unidata/netcdf4-python/releases/tag/v1.5.7rel
* devel/onetbb: Update to 2021.4.0Ganael LAPLANCHE2021-10-102-2/+2
| | | | Release notes: https://software.intel.com/content/www/us/en/develop/articles/intel-oneapi-threading-building-blocks-release-notes.html
* science/shelxle: Update 1.0.1326 -> 1.0.1328Yuri Victorovich2021-10-102-4/+4
| | | | Reported by: portscout
* science/py-PyNE: New port: PyNE: The Nuclear Engineering ToolkitYuri Victorovich2021-10-106-0/+342
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