From dba461c9e39f220042da78ea3872b3e0f0dc6e5b Mon Sep 17 00:00:00 2001 From: Yuri Victorovich Date: Tue, 16 Apr 2024 20:48:29 -0700 Subject: =?UTF-8?q?science/abinit:=20update=209.10.5=20=E2=86=92=2010.0.3?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Reported by: portscout --- science/abinit/Makefile | 9 ++++++--- science/abinit/distinfo | 6 +++--- science/abinit/files/patch-config_scripts_makemake | 4 ++-- .../abinit/files/patch-shared__common__src__02_clib__md5.c | 11 ----------- .../patch-shared_common_src_33__xc__lowlevel_libxc__tools.c | 6 +++--- science/abinit/files/patch-shared_libpaw_src_libpaw__libxc.c | 6 +++--- 6 files changed, 17 insertions(+), 25 deletions(-) delete mode 100644 science/abinit/files/patch-shared__common__src__02_clib__md5.c diff --git a/science/abinit/Makefile b/science/abinit/Makefile index f9395f78fd61..0dbf5ddee359 100644 --- a/science/abinit/Makefile +++ b/science/abinit/Makefile @@ -1,5 +1,5 @@ PORTNAME= abinit -DISTVERSION= 9.10.5 +DISTVERSION= 10.0.3 CATEGORIES= science MAINTAINER= yuri@FreeBSD.org @@ -27,7 +27,8 @@ LIB_DEPENDS= libelpa.so:math/elpa \ libwannier.so:science/wannier90 \ libnetcdff.so:science/netcdf-fortran RUN_DEPENDS= atompaw:science/atompaw -TEST_DEPENDS= ${PYNUMPY} \ +TEST_DEPENDS= bash:shells/bash \ + ${PYNUMPY} \ libyaml>0:textproc/libyaml USES= autoreconf:build blaslapack:netlib fortran gmake gnome localbase:ldflags \ @@ -35,7 +36,7 @@ USES= autoreconf:build blaslapack:netlib fortran gmake gnome localbase:ldflags USE_GITHUB= yes USE_GNOME= libxml2 SHEBANG_FILES= config/scripts/* doc/tutorial/paral_bandpw_assets/abinit.sub.* -SHEBANG_GLOB= *.py +SHEBANG_GLOB= *.py *.sh GNU_CONFIGURE= yes CONFIGURE_ENV= H5CC="${LOCALBASE}/bin/h5cc" \ HDF5_CFLAGS="-I${LOCALBASE}/include" \ @@ -52,6 +53,8 @@ TEST_TARGET= tests_abirules tests_buildsys # Many tests print RuntimeError, http TEST_WRKSRC= ${WRKSRC}/abichecks PORTDOCS= * +BINARY_ALIAS= git=false + OPTIONS_DEFINE= DOCS OPENMP OPENMPI OPTIONS_DEFAULT= OPENMP OPENMPI diff --git a/science/abinit/distinfo b/science/abinit/distinfo index 89d7bb17581b..d2b8c03f6c68 100644 --- a/science/abinit/distinfo +++ b/science/abinit/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1708573562 -SHA256 (abinit-abinit-9.10.5_GH0.tar.gz) = 2e37dd2400cfd1b01d0bd925650d50e8c59e587a8d799a74188deded4d53493b -SIZE (abinit-abinit-9.10.5_GH0.tar.gz) = 130746379 +TIMESTAMP = 1713294583 +SHA256 (abinit-abinit-10.0.3_GH0.tar.gz) = bd3d319dd6146890d2428a80da5eba1280e07f6e72489612dbad73bbf3043c9d +SIZE (abinit-abinit-10.0.3_GH0.tar.gz) = 132478613 diff --git a/science/abinit/files/patch-config_scripts_makemake b/science/abinit/files/patch-config_scripts_makemake index ee97e9a3e4df..7f57ca5af7c6 100644 --- a/science/abinit/files/patch-config_scripts_makemake +++ b/science/abinit/files/patch-config_scripts_makemake @@ -1,6 +1,6 @@ ---- config/scripts/makemake.orig 2020-12-26 16:36:41 UTC +--- config/scripts/makemake.orig 2024-04-16 19:11:37 UTC +++ config/scripts/makemake -@@ -408,7 +408,7 @@ if ( opts.run_clean ): +@@ -414,7 +414,7 @@ if ( opts.run_clean ): sys.exit(0) # Get Autotools versions diff --git a/science/abinit/files/patch-shared__common__src__02_clib__md5.c b/science/abinit/files/patch-shared__common__src__02_clib__md5.c deleted file mode 100644 index 16408c671ee0..000000000000 --- a/science/abinit/files/patch-shared__common__src__02_clib__md5.c +++ /dev/null @@ -1,11 +0,0 @@ ---- shared/common/src/02_clib/md5.c.orig 2017-02-28 12:02:53 UTC -+++ shared/common/src/02_clib/md5.c -@@ -47,7 +47,7 @@ - #ifdef HAVE_MALLOC_MALLOC_H - # include - #else --# include -+# include - #endif - - #include "md5.h" diff --git a/science/abinit/files/patch-shared_common_src_33__xc__lowlevel_libxc__tools.c b/science/abinit/files/patch-shared_common_src_33__xc__lowlevel_libxc__tools.c index cc74d5aac0e3..ac962841185f 100644 --- a/science/abinit/files/patch-shared_common_src_33__xc__lowlevel_libxc__tools.c +++ b/science/abinit/files/patch-shared_common_src_33__xc__lowlevel_libxc__tools.c @@ -1,6 +1,6 @@ ---- shared/common/src/33_xc_lowlevel/libxc_tools.c.orig 2023-04-24 13:01:07 UTC +--- shared/common/src/33_xc_lowlevel/libxc_tools.c.orig 2024-04-12 04:50:51 UTC +++ shared/common/src/33_xc_lowlevel/libxc_tools.c -@@ -73,7 +73,7 @@ void xc_get_family_constants(int *xc_cst_family_unknow +@@ -74,7 +74,7 @@ void xc_get_family_constants(int *xc_cst_family_unknow *xc_cst_family_oep = XC_FAMILY_OEP; *xc_cst_family_hyb_gga = XC_FAMILY_HYB_GGA; *xc_cst_family_hyb_mgga = XC_FAMILY_HYB_MGGA; @@ -9,7 +9,7 @@ /* ==== libXC v6.0 and later ==== */ *xc_cst_family_hyb_lda = XC_FAMILY_HYB_LDA; #else -@@ -364,7 +364,7 @@ void xc_func_set_grad_sig_threshold(XC(func_type) *xc_ +@@ -405,7 +405,7 @@ int xc_func_is_hybrid_from_id(int func_id) int xc_func_is_hybrid_from_id(int func_id) /* ==== Before libXC v6.0 ==== */ {int family; family=xc_family_from_id(func_id, NULL, NULL); diff --git a/science/abinit/files/patch-shared_libpaw_src_libpaw__libxc.c b/science/abinit/files/patch-shared_libpaw_src_libpaw__libxc.c index a68cb06767cd..ac22e42945c9 100644 --- a/science/abinit/files/patch-shared_libpaw_src_libpaw__libxc.c +++ b/science/abinit/files/patch-shared_libpaw_src_libpaw__libxc.c @@ -1,6 +1,6 @@ ---- shared/libpaw/src/libpaw_libxc.c.orig 2023-04-24 13:01:07 UTC +--- shared/libpaw/src/libpaw_libxc.c.orig 2024-04-12 04:50:51 UTC +++ shared/libpaw/src/libpaw_libxc.c -@@ -70,7 +70,7 @@ void libpaw_xc_get_family_constants(int *xc_cst_family +@@ -71,7 +71,7 @@ void libpaw_xc_get_family_constants(int *xc_cst_family *xc_cst_family_oep = XC_FAMILY_OEP; *xc_cst_family_hyb_gga = XC_FAMILY_HYB_GGA; *xc_cst_family_hyb_mgga = XC_FAMILY_HYB_MGGA; @@ -9,7 +9,7 @@ /* ==== libXC v6.0 and later ==== */ *xc_cst_family_hyb_lda = XC_FAMILY_HYB_LDA; #else -@@ -312,7 +312,7 @@ void libpaw_xc_func_set_sig_threshold(XC(func_type) *x +@@ -353,7 +353,7 @@ int libpaw_xc_func_is_hybrid_from_id(int func_id) */ int libpaw_xc_func_is_hybrid_from_id(int func_id) {int family; family=xc_family_from_id(func_id, NULL, NULL); -- cgit v1.2.3