path: root/science/gromacs/pkg-plist

bin/GMXRC
bin/GMXRC.bash
bin/GMXRC.csh
bin/GMXRC.zsh
bin/demux.pl
bin/gmx-completion-gmx%%SUFFIX_D%%.bash
bin/gmx-completion.bash
bin/gmx%%SUFFIX_D%%
bin/xplor2gmx.pl
include/gmxapi/compat/mdparams.h
include/gmxapi/compat/tpr.h
include/gmxapi/context.h
include/gmxapi/exceptions.h
include/gmxapi/gmxapi.h
include/gmxapi/gmxapicompat.h
include/gmxapi/gromacsfwd.h
include/gmxapi/md.h
include/gmxapi/md/mdmodule.h
include/gmxapi/md/mdsignals.h
include/gmxapi/mpi/gmxapi_mpi.h
include/gmxapi/mpi/resourceassignment.h
include/gmxapi/session.h
include/gmxapi/session/resources.h
include/gmxapi/status.h
include/gmxapi/system.h
include/gmxapi/version.h
%%LEGACY%%include/gromacs/analysisdata.h
%%LEGACY%%include/gromacs/analysisdata/abstractdata.h
%%LEGACY%%include/gromacs/analysisdata/analysisdata.h
%%LEGACY%%include/gromacs/analysisdata/arraydata.h
%%LEGACY%%include/gromacs/analysisdata/dataframe.h
%%LEGACY%%include/gromacs/analysisdata/datamodule.h
%%LEGACY%%include/gromacs/analysisdata/modules/average.h
%%LEGACY%%include/gromacs/analysisdata/modules/displacement.h
%%LEGACY%%include/gromacs/analysisdata/modules/histogram.h
%%LEGACY%%include/gromacs/analysisdata/modules/lifetime.h
%%LEGACY%%include/gromacs/analysisdata/modules/plot.h
%%LEGACY%%include/gromacs/external/boost/stl_interfaces/fwd.hpp
%%LEGACY%%include/gromacs/external/boost/stl_interfaces/iterator_interface.hpp
%%LEGACY%%include/gromacs/fileio/confio.h
%%LEGACY%%include/gromacs/fileio/filetypes.h
%%LEGACY%%include/gromacs/fileio/oenv.h
%%LEGACY%%include/gromacs/fileio/pdbio.h
%%LEGACY%%include/gromacs/fileio/tpxio.h
%%LEGACY%%include/gromacs/fileio/trxio.h
include/gromacs/math/do_fit.h
include/gromacs/math/functions.h
include/gromacs/math/units.h
include/gromacs/math/utilities.h
include/gromacs/math/vec.h
include/gromacs/math/vectypes.h
include/gromacs/mdrun/simulationinputhandle.h
%%LEGACY%%include/gromacs/mdtypes/inputrec.h
%%LEGACY%%include/gromacs/mdtypes/md_enums.h
%%LEGACY%%include/gromacs/options.h
%%LEGACY%%include/gromacs/options/abstractoption.h
%%LEGACY%%include/gromacs/options/basicoptions.h
%%LEGACY%%include/gromacs/options/filenameoption.h
%%LEGACY%%include/gromacs/options/filenameoptionmanager.h
%%LEGACY%%include/gromacs/options/ioptionsbehavior.h
%%LEGACY%%include/gromacs/options/ioptionscontainer.h
%%LEGACY%%include/gromacs/options/ioptionscontainerwithsections.h
%%LEGACY%%include/gromacs/options/ivaluestore.h
%%LEGACY%%include/gromacs/options/optionfiletype.h
%%LEGACY%%include/gromacs/options/optionflags.h
%%LEGACY%%include/gromacs/options/options.h
%%LEGACY%%include/gromacs/options/timeunitmanager.h
%%LEGACY%%include/gromacs/pbcutil/pbc.h
include/gromacs/restraint/restraintpotential.h
%%LEGACY%%include/gromacs/selection.h
%%LEGACY%%include/gromacs/selection/indexutil.h
%%LEGACY%%include/gromacs/selection/nbsearch.h
%%LEGACY%%include/gromacs/selection/position.h
%%LEGACY%%include/gromacs/selection/selection.h
%%LEGACY%%include/gromacs/selection/selectioncollection.h
%%LEGACY%%include/gromacs/selection/selectionenums.h
%%LEGACY%%include/gromacs/selection/selectionoption.h
%%LEGACY%%include/gromacs/selection/selectionoptionbehavior.h
%%LEGACY%%include/gromacs/selection/selectionoptionmanager.h
%%LEGACY%%include/gromacs/topology/atomprop.h
%%LEGACY%%include/gromacs/topology/atoms.h
%%LEGACY%%include/gromacs/topology/block.h
%%LEGACY%%include/gromacs/topology/forcefieldparameters.h
%%LEGACY%%include/gromacs/topology/idef.h
%%LEGACY%%include/gromacs/topology/ifunc.h
%%LEGACY%%include/gromacs/topology/index.h
%%LEGACY%%include/gromacs/topology/symtab.h
%%LEGACY%%include/gromacs/topology/topology.h
%%LEGACY%%include/gromacs/trajectory/trajectoryframe.h
%%LEGACY%%include/gromacs/trajectoryanalysis.h
%%LEGACY%%include/gromacs/trajectoryanalysis/analysismodule.h
%%LEGACY%%include/gromacs/trajectoryanalysis/analysissettings.h
%%LEGACY%%include/gromacs/trajectoryanalysis/cmdlinerunner.h
%%LEGACY%%include/gromacs/trajectoryanalysis/topologyinformation.h
%%LEGACY%%include/gromacs/utility/arrayref.h
include/gromacs/utility/basedefinitions.h
%%LEGACY%%include/gromacs/utility/baseversion.h
%%LEGACY%%include/gromacs/utility/classhelpers.h
include/gromacs/utility/current_function.h
%%LEGACY%%include/gromacs/utility/enumerationhelpers.h
%%LEGACY%%include/gromacs/utility/exceptions.h
%%LEGACY%%include/gromacs/utility/fileptr.h
%%LEGACY%%include/gromacs/utility/flags.h
%%LEGACY%%include/gromacs/utility/futil.h
include/gromacs/utility/gmxassert.h
%%LEGACY%%include/gromacs/utility/listoflists.h
%%LEGACY%%include/gromacs/utility/pleasecite.h
%%LEGACY%%include/gromacs/utility/programcontext.h
%%LEGACY%%include/gromacs/utility/range.h
include/gromacs/utility/real.h
%%LEGACY%%include/gromacs/utility/smalloc.h
%%LEGACY%%include/gromacs/utility/stringutil.h
%%LEGACY%%include/gromacs/utility/unique_cptr.h
%%LEGACY%%include/gromacs/version.h
include/muParser.h
include/muParserBase.h
include/muParserBytecode.h
include/muParserCallback.h
include/muParserDLL.h
include/muParserDef.h
include/muParserError.h
include/muParserFixes.h
include/muParserInt.h
include/muParserTemplateMagic.h
include/muParserTest.h
include/muParserToken.h
include/muParserTokenReader.h
include/nblib/basicdefinitions.h
include/nblib/box.h
include/nblib/exception.h
include/nblib/gmxcalculatorcpu.h
include/nblib/integrator.h
include/nblib/interactions.h
include/nblib/kerneloptions.h
include/nblib/listed_forces/bondtypes.h
include/nblib/listed_forces/calculator.h
include/nblib/listed_forces/definitions.h
include/nblib/molecules.h
include/nblib/nblib.h
include/nblib/nbnxmsetuphelpers.h
include/nblib/particlesequencer.h
include/nblib/particletype.h
include/nblib/simulationstate.h
include/nblib/topology.h
include/nblib/tpr.h
include/nblib/util/setup.h
include/nblib/util/traits.hpp
include/nblib/util/util.hpp
include/nblib/vector.h
lib/libgmxapi%%SUFFIX_D%%.so
lib/libgmxapi%%SUFFIX_D%%.so.0
lib/libgmxapi%%SUFFIX_D%%.so.0.3.1
lib/libgromacs%%SUFFIX_D%%.so
lib/libgromacs%%SUFFIX_D%%.so.7
lib/libgromacs%%SUFFIX_D%%.so.7.0.0
lib/libmuparser.so
lib/libmuparser.so.2
lib/libmuparser.so.2.3.2
lib/libnblib_gmx.so
lib/libnblib_gmx.so.0
lib/libnblib_gmx.so.0.1.0
libdata/pkgconfig/libgromacs%%SUFFIX_D%%.pc
libdata/pkgconfig/muparser.pc
man/man1/gmx-anaeig.1.gz
man/man1/gmx-analyze.1.gz
man/man1/gmx-angle.1.gz
man/man1/gmx-awh.1.gz
man/man1/gmx-bar.1.gz
man/man1/gmx-bundle.1.gz
man/man1/gmx-check.1.gz
man/man1/gmx-chi.1.gz
man/man1/gmx-cluster.1.gz
man/man1/gmx-clustsize.1.gz
man/man1/gmx-confrms.1.gz
man/man1/gmx-convert-tpr.1.gz
man/man1/gmx-convert-trj.1.gz
man/man1/gmx-covar.1.gz
man/man1/gmx-current.1.gz
man/man1/gmx-density.1.gz
man/man1/gmx-densmap.1.gz
man/man1/gmx-densorder.1.gz
man/man1/gmx-dielectric.1.gz
man/man1/gmx-dipoles.1.gz
man/man1/gmx-disre.1.gz
man/man1/gmx-distance.1.gz
man/man1/gmx-do%%SUFFIX_D%%ssp.1.gz
man/man1/gmx-dos.1.gz
man/man1/gmx-dump.1.gz
man/man1/gmx-dyecoupl.1.gz
man/man1/gmx-editconf.1.gz
man/man1/gmx-eneconv.1.gz
man/man1/gmx-enemat.1.gz
man/man1/gmx-energy.1.gz
man/man1/gmx-extract-cluster.1.gz
man/man1/gmx-filter.1.gz
man/man1/gmx-freevolume.1.gz
man/man1/gmx-gangle.1.gz
man/man1/gmx-genconf.1.gz
man/man1/gmx-genion.1.gz
man/man1/gmx-genrestr.1.gz
man/man1/gmx-grompp.1.gz
man/man1/gmx-gyrate.1.gz
man/man1/gmx-h2order.1.gz
man/man1/gmx-hbond.1.gz
man/man1/gmx-helix.1.gz
man/man1/gmx-helixorient.1.gz
man/man1/gmx-help.1.gz
man/man1/gmx-hydorder.1.gz
man/man1/gmx-insert-molecules.1.gz
man/man1/gmx-lie.1.gz
man/man1/gmx-make_edi.1.gz
man/man1/gmx-make_ndx.1.gz
man/man1/gmx-mdmat.1.gz
man/man1/gmx-mdrun.1.gz
man/man1/gmx-mindist.1.gz
man/man1/gmx-mk_angndx.1.gz
man/man1/gmx-msd.1.gz
man/man1/gmx-nmeig.1.gz
man/man1/gmx-nmens.1.gz
man/man1/gmx-nmr.1.gz
man/man1/gmx-nmtraj.1.gz
man/man1/gmx-nonbonded-benchmark.1.gz
man/man1/gmx-order.1.gz
man/man1/gmx-pairdist.1.gz
man/man1/gmx-pdb2gmx.1.gz
man/man1/gmx-pme_error.1.gz
man/man1/gmx-polystat.1.gz
man/man1/gmx-potential.1.gz
man/man1/gmx-principal.1.gz
man/man1/gmx-rama.1.gz
man/man1/gmx-rdf.1.gz
man/man1/gmx-report-methods.1.gz
man/man1/gmx-rms.1.gz
man/man1/gmx-rmsdist.1.gz
man/man1/gmx-rmsf.1.gz
man/man1/gmx-rotacf.1.gz
man/man1/gmx-rotmat.1.gz
man/man1/gmx-saltbr.1.gz
man/man1/gmx-sans.1.gz
man/man1/gmx-sasa.1.gz
man/man1/gmx-saxs.1.gz
man/man1/gmx-select.1.gz
man/man1/gmx-sham.1.gz
man/man1/gmx-sigeps.1.gz
man/man1/gmx-solvate.1.gz
man/man1/gmx-sorient.1.gz
man/man1/gmx-spatial.1.gz
man/man1/gmx-spol.1.gz
man/man1/gmx-tcaf.1.gz
man/man1/gmx-traj.1.gz
man/man1/gmx-trajectory.1.gz
man/man1/gmx-trjcat.1.gz
man/man1/gmx-trjconv.1.gz
man/man1/gmx-trjorder.1.gz
man/man1/gmx-tune_pme.1.gz
man/man1/gmx-vanhove.1.gz
man/man1/gmx-velacc.1.gz
man/man1/gmx-view.1.gz
man/man1/gmx-wham.1.gz
man/man1/gmx-wheel.1.gz
man/man1/gmx-x2top.1.gz
man/man1/gmx-xpm2ps.1.gz
man/man1/gmx.1.gz
share/cmake/gmxapi/gmxapi-config-version.cmake
share/cmake/gmxapi/gmxapi-config.cmake
share/cmake/gmxapi/gmxapi-%%CMAKE_BUILD_TYPE%%.cmake
share/cmake/gmxapi/gmxapi.cmake
share/cmake/gromacs%%SUFFIX_D%%/gromacs-hints%%SUFFIX_D%%.cmake
share/cmake/gromacs%%SUFFIX_D%%/gromacs%%SUFFIX_D%%-config-version.cmake
share/cmake/gromacs%%SUFFIX_D%%/gromacs%%SUFFIX_D%%-config.cmake
share/cmake/gromacs%%SUFFIX_D%%/libgromacs-%%CMAKE_BUILD_TYPE%%.cmake
share/cmake/gromacs%%SUFFIX_D%%/libgromacs.cmake
%%DATADIR%%/COPYING
%%DATADIR%%/README.tutor
%%DATADIR%%/README_FreeEnergyModifications.txt
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernel_amd.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernel_nowarp.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernel_nvidia.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernel_pruneonly.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernel_utils.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernels.cl
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernels.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernels_fastgen.clh
%%OPENCL%%%%DATADIR%%/opencl/nbnxn_ocl_kernels_fastgen_add_twincut.clh
%%OPENCL%%%%DATADIR%%/opencl/vectype_ops.clh
%%LEGACY%%%%DATADIR%%/template/CMakeLists.txt
%%LEGACY%%%%DATADIR%%/template/Makefile.pkg
%%LEGACY%%%%DATADIR%%/template/README
%%LEGACY%%%%DATADIR%%/template/cmake/FindGROMACS.cmake
%%LEGACY%%%%DATADIR%%/template/template.cpp
%%DATADIR%%/top/README
%%DATADIR%%/top/amber03.ff/aminoacids.arn
%%DATADIR%%/top/amber03.ff/aminoacids.c.tdb
%%DATADIR%%/top/amber03.ff/aminoacids.hdb
%%DATADIR%%/top/amber03.ff/aminoacids.n.tdb
%%DATADIR%%/top/amber03.ff/aminoacids.r2b
%%DATADIR%%/top/amber03.ff/aminoacids.rtp
%%DATADIR%%/top/amber03.ff/aminoacids.vsd
%%DATADIR%%/top/amber03.ff/atomtypes.atp
%%DATADIR%%/top/amber03.ff/dna.arn
%%DATADIR%%/top/amber03.ff/dna.hdb
%%DATADIR%%/top/amber03.ff/dna.r2b
%%DATADIR%%/top/amber03.ff/dna.rtp
%%DATADIR%%/top/amber03.ff/ffbonded.itp
%%DATADIR%%/top/amber03.ff/ffnonbonded.itp
%%DATADIR%%/top/amber03.ff/forcefield.doc
%%DATADIR%%/top/amber03.ff/forcefield.itp
%%DATADIR%%/top/amber03.ff/ions.itp
%%DATADIR%%/top/amber03.ff/rna.arn
%%DATADIR%%/top/amber03.ff/rna.hdb
%%DATADIR%%/top/amber03.ff/rna.r2b
%%DATADIR%%/top/amber03.ff/rna.rtp
%%DATADIR%%/top/amber03.ff/spc.itp
%%DATADIR%%/top/amber03.ff/spce.itp
%%DATADIR%%/top/amber03.ff/tip3p.itp
%%DATADIR%%/top/amber03.ff/tip4p.itp
%%DATADIR%%/top/amber03.ff/tip4pew.itp
%%DATADIR%%/top/amber03.ff/tip5p.itp
%%DATADIR%%/top/amber03.ff/urea.itp
%%DATADIR%%/top/amber03.ff/watermodels.dat
%%DATADIR%%/top/amber94.ff/aminoacids.arn
%%DATADIR%%/top/amber94.ff/aminoacids.c.tdb
%%DATADIR%%/top/amber94.ff/aminoacids.hdb
%%DATADIR%%/top/amber94.ff/aminoacids.n.tdb
%%DATADIR%%/top/amber94.ff/aminoacids.r2b
%%DATADIR%%/top/amber94.ff/aminoacids.rtp
%%DATADIR%%/top/amber94.ff/aminoacids.vsd
%%DATADIR%%/top/amber94.ff/atomtypes.atp
%%DATADIR%%/top/amber94.ff/dna.arn
%%DATADIR%%/top/amber94.ff/dna.hdb
%%DATADIR%%/top/amber94.ff/dna.r2b
%%DATADIR%%/top/amber94.ff/dna.rtp
%%DATADIR%%/top/amber94.ff/ffbonded.itp
%%DATADIR%%/top/amber94.ff/ffnonbonded.itp
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%%DATADIR%%/top/amber94.ff/forcefield.itp
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%%DATADIR%%/top/amber94.ff/rna.arn
%%DATADIR%%/top/amber94.ff/rna.hdb
%%DATADIR%%/top/amber94.ff/rna.r2b
%%DATADIR%%/top/amber94.ff/rna.rtp
%%DATADIR%%/top/amber94.ff/spc.itp
%%DATADIR%%/top/amber94.ff/spce.itp
%%DATADIR%%/top/amber94.ff/tip3p.itp
%%DATADIR%%/top/amber94.ff/tip4p.itp
%%DATADIR%%/top/amber94.ff/tip4pew.itp
%%DATADIR%%/top/amber94.ff/tip5p.itp
%%DATADIR%%/top/amber94.ff/urea.itp
%%DATADIR%%/top/amber94.ff/watermodels.dat
%%DATADIR%%/top/amber96.ff/aminoacids.arn
%%DATADIR%%/top/amber96.ff/aminoacids.c.tdb
%%DATADIR%%/top/amber96.ff/aminoacids.hdb
%%DATADIR%%/top/amber96.ff/aminoacids.n.tdb
%%DATADIR%%/top/amber96.ff/aminoacids.r2b
%%DATADIR%%/top/amber96.ff/aminoacids.rtp
%%DATADIR%%/top/amber96.ff/aminoacids.vsd
%%DATADIR%%/top/amber96.ff/atomtypes.atp
%%DATADIR%%/top/amber96.ff/dna.arn
%%DATADIR%%/top/amber96.ff/dna.hdb
%%DATADIR%%/top/amber96.ff/dna.r2b
%%DATADIR%%/top/amber96.ff/dna.rtp
%%DATADIR%%/top/amber96.ff/ffbonded.itp
%%DATADIR%%/top/amber96.ff/ffnonbonded.itp
%%DATADIR%%/top/amber96.ff/forcefield.doc
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%%DATADIR%%/top/amber96.ff/rna.arn
%%DATADIR%%/top/amber96.ff/rna.hdb
%%DATADIR%%/top/amber96.ff/rna.r2b
%%DATADIR%%/top/amber96.ff/rna.rtp
%%DATADIR%%/top/amber96.ff/spc.itp
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%%DATADIR%%/top/amber96.ff/tip3p.itp
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%%DATADIR%%/top/amber96.ff/watermodels.dat
%%DATADIR%%/top/amber99.ff/aminoacids.arn
%%DATADIR%%/top/amber99.ff/aminoacids.c.tdb
%%DATADIR%%/top/amber99.ff/aminoacids.hdb
%%DATADIR%%/top/amber99.ff/aminoacids.n.tdb
%%DATADIR%%/top/amber99.ff/aminoacids.r2b
%%DATADIR%%/top/amber99.ff/aminoacids.rtp
%%DATADIR%%/top/amber99.ff/aminoacids.vsd
%%DATADIR%%/top/amber99.ff/atomtypes.atp
%%DATADIR%%/top/amber99.ff/dna.arn
%%DATADIR%%/top/amber99.ff/dna.hdb
%%DATADIR%%/top/amber99.ff/dna.r2b
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%%DATADIR%%/top/amber99.ff/forcefield.itp
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%%DATADIR%%/top/amber99.ff/rna.arn
%%DATADIR%%/top/amber99.ff/rna.hdb
%%DATADIR%%/top/amber99.ff/rna.r2b
%%DATADIR%%/top/amber99.ff/rna.rtp
%%DATADIR%%/top/amber99.ff/spc.itp
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%%DATADIR%%/top/amber99.ff/tip3p.itp
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%%DATADIR%%/top/amber99.ff/urea.itp
%%DATADIR%%/top/amber99.ff/watermodels.dat
%%DATADIR%%/top/amber99sb-ildn.ff/aminoacids.arn
%%DATADIR%%/top/amber99sb-ildn.ff/aminoacids.c.tdb
%%DATADIR%%/top/amber99sb-ildn.ff/aminoacids.hdb
%%DATADIR%%/top/amber99sb-ildn.ff/aminoacids.n.tdb
%%DATADIR%%/top/amber99sb-ildn.ff/aminoacids.r2b
%%DATADIR%%/top/amber99sb-ildn.ff/aminoacids.rtp
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%%DATADIR%%/top/amber99sb-ildn.ff/atomtypes.atp
%%DATADIR%%/top/amber99sb-ildn.ff/dna.arn
%%DATADIR%%/top/amber99sb-ildn.ff/dna.hdb
%%DATADIR%%/top/amber99sb-ildn.ff/dna.r2b
%%DATADIR%%/top/amber99sb-ildn.ff/dna.rtp
%%DATADIR%%/top/amber99sb-ildn.ff/ffbonded.itp
%%DATADIR%%/top/amber99sb-ildn.ff/ffnonbonded.itp
%%DATADIR%%/top/amber99sb-ildn.ff/forcefield.doc
%%DATADIR%%/top/amber99sb-ildn.ff/forcefield.itp
%%DATADIR%%/top/amber99sb-ildn.ff/ions.itp
%%DATADIR%%/top/amber99sb-ildn.ff/rna.arn
%%DATADIR%%/top/amber99sb-ildn.ff/rna.hdb
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%%DATADIR%%/top/amber99sb-ildn.ff/rna.rtp
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%%DATADIR%%/top/amber99sb.ff/aminoacids.arn
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