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| author | Yuri Victorovich <yuri@FreeBSD.org> | 2021-08-17 21:21:57 +0000 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2021-08-17 21:30:07 +0000 |
| commit | 10875d93bb728801a61c3d78a1e140718fd0cfdf (patch) | |
| tree | f6cd225ee96869851853342221dc424a78d577c8 | |
| parent | 8327c7747f74c6e7cf47eabda9a029f2b89ac910 (diff) | |
| download | ports-10875d93bb728801a61c3d78a1e140718fd0cfdf.tar.gz ports-10875d93bb728801a61c3d78a1e140718fd0cfdf.zip | |
biology/py-python-libsbml: New port: LibSBML Python API
| -rw-r--r-- | biology/Makefile | 1 | ||||
| -rw-r--r-- | biology/py-python-libsbml/Makefile | 21 | ||||
| -rw-r--r-- | biology/py-python-libsbml/distinfo | 3 | ||||
| -rw-r--r-- | biology/py-python-libsbml/pkg-descr | 4 | ||||
| -rw-r--r-- | biology/py-python-libsbml/pkg-plist | 3 |
5 files changed, 32 insertions, 0 deletions
diff --git a/biology/Makefile b/biology/Makefile index 9f1aa3be4cd9..d02ab1ac20eb 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -151,6 +151,7 @@ SUBDIR += py-pandas-charm SUBDIR += py-pyfaidx SUBDIR += py-pysam + SUBDIR += py-python-libsbml SUBDIR += py-resdk SUBDIR += py-scikit-bio SUBDIR += py-xenaPython diff --git a/biology/py-python-libsbml/Makefile b/biology/py-python-libsbml/Makefile new file mode 100644 index 000000000000..2acf5ef53d00 --- /dev/null +++ b/biology/py-python-libsbml/Makefile @@ -0,0 +1,21 @@ +PORTNAME= python-libsbml +DISTVERSION= 5.19.0 +CATEGORIES= biology python +MASTER_SITES= CHEESESHOP +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= yuri@FreeBSD.org +COMMENT= LibSBML Python API + +LICENSE= LGPL21 + +BUILD_DEPENDS= cmake:devel/cmake \ + swig:devel/swig + +USES= python:3.6+ +USE_PYTHON= autoplist distutils # autoplist produces incomplete plist, missing files are in pkg-plist. Reported to the upstream author fbergman@caltech.edu on 2021-08-17 + +post-install: + @${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/libsbml/_libsbml.cpython-38.so + +.include <bsd.port.mk> diff --git a/biology/py-python-libsbml/distinfo b/biology/py-python-libsbml/distinfo new file mode 100644 index 000000000000..6f7129d3cedb --- /dev/null +++ b/biology/py-python-libsbml/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1629231482 +SHA256 (python-libsbml-5.19.0.tar.gz) = 87596017aa76c1284e83247593fe999ab7ba9a84e7488bcf0434b01277858f86 +SIZE (python-libsbml-5.19.0.tar.gz) = 36842483 diff --git a/biology/py-python-libsbml/pkg-descr b/biology/py-python-libsbml/pkg-descr new file mode 100644 index 000000000000..22c87a0470a3 --- /dev/null +++ b/biology/py-python-libsbml/pkg-descr @@ -0,0 +1,4 @@ +Python binding for libsbml - Systems Biology Markup Language (SBML) read/write +library. + +WWW: http://sbml.org/Main_Page diff --git a/biology/py-python-libsbml/pkg-plist b/biology/py-python-libsbml/pkg-plist new file mode 100644 index 000000000000..092f79185065 --- /dev/null +++ b/biology/py-python-libsbml/pkg-plist @@ -0,0 +1,3 @@ +%%PYTHON_SITELIBDIR%%/libsbml/__init__.py +%%PYTHON_SITELIBDIR%%/libsbml/__pycache__/__init__%%PYTHON_EXT_SUFFIX%%.opt-1.pyc +%%PYTHON_SITELIBDIR%%/libsbml/__pycache__/__init__%%PYTHON_EXT_SUFFIX%%.pyc |