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| author | Joseph Mingrone <jrm@FreeBSD.org> | 2021-06-05 22:58:36 +0000 |
|---|---|---|
| committer | Joseph Mingrone <jrm@FreeBSD.org> | 2021-06-05 23:00:24 +0000 |
| commit | c33cf04fe57592ec5c03074f022d3bfa917fd2c7 (patch) | |
| tree | 515d9f4abeb7059b6c9a61eadb209b7d8af9ecaf | |
| parent | b21237d40d11d667648a771bccf61bd47d8b3803 (diff) | |
| download | ports-c33cf04fe57592ec5c03074f022d3bfa917fd2c7.tar.gz ports-c33cf04fe57592ec5c03074f022d3bfa917fd2c7.zip | |
biology/hyphy: Update to 2.5.31
| -rw-r--r-- | biology/hyphy/Makefile | 2 | ||||
| -rw-r--r-- | biology/hyphy/distinfo | 6 | ||||
| -rw-r--r-- | biology/hyphy/files/patch-CMakeLists.txt | 27 |
3 files changed, 31 insertions, 4 deletions
diff --git a/biology/hyphy/Makefile b/biology/hyphy/Makefile index 840581d4926e..34850adee62a 100644 --- a/biology/hyphy/Makefile +++ b/biology/hyphy/Makefile @@ -1,5 +1,5 @@ PORTNAME= hyphy -DISTVERSION= 2.5.30 +DISTVERSION= 2.5.31 CATEGORIES= biology MAINTAINER= jrm@FreeBSD.org diff --git a/biology/hyphy/distinfo b/biology/hyphy/distinfo index f4ad79792145..9300d52387fe 100644 --- a/biology/hyphy/distinfo +++ b/biology/hyphy/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1617844705 -SHA256 (veg-hyphy-2.5.30_GH0.tar.gz) = 8850964cfe75b0053af49994be7d847e7827a6117f926f45db5798d12e54bad1 -SIZE (veg-hyphy-2.5.30_GH0.tar.gz) = 5341483 +TIMESTAMP = 1622916930 +SHA256 (veg-hyphy-2.5.31_GH0.tar.gz) = 2fa27ba3c4464ee2239570ebf6a038c6a3e216350ba8c3c22e43de0cb9c5dbd7 +SIZE (veg-hyphy-2.5.31_GH0.tar.gz) = 5342292 diff --git a/biology/hyphy/files/patch-CMakeLists.txt b/biology/hyphy/files/patch-CMakeLists.txt new file mode 100644 index 000000000000..704bbe9368b6 --- /dev/null +++ b/biology/hyphy/files/patch-CMakeLists.txt @@ -0,0 +1,27 @@ +--- CMakeLists.txt.orig 2021-06-05 18:31:25 UTC ++++ CMakeLists.txt +@@ -307,21 +307,16 @@ endif(CMAKE_SYSTEM_NAME MATCHES "FreeBSD") + #------------------------------------------------------------------------------- + find_package(CURL) + if(${CURL_FOUND}) +- #if(CMAKE_SYSTEM_NAME MATCHES "FreeBSD") +- # set(DEFAULT_LIBRARIES " crypto curl ssl") +- #else(CMAKE_SYSTEM_NAME MATCHES "FreeBSD") +- # set(DEFAULT_LIBRARIES "dl crypto curl ssl") +- #endif(CMAKE_SYSTEM_NAME MATCHES "FreeBSD") + message(${CURL_LIBRARIES}) +- string(APPEND DEFAULT_LIBRARIES " " ${CURL_LIBRARIES}) ++ list(APPEND DEFAULT_LIBRARIES ${CURL_LIBRARIES}) + add_definitions (-D__HYPHYCURL__) + endif(${CURL_FOUND}) + + if(NOT NOZLIB) + find_package(ZLIB 1.2.9) + if(${ZLIB_FOUND}) +- string(APPEND DEFAULT_LIBRARIES " " ${ZLIB_LIBRARIES}) +- include_directories(${ZLIB_INCLUDE_DIRS}) ++ list(APPEND DEFAULT_LIBRARIES ${ZLIB_LIBRARIES}) ++ include_directories(${ZLIB_INCLUDE_DIRS}) + add_definitions (-D__ZLIB__) + endif(${ZLIB_FOUND}) + endif(NOT NOZLIB) |