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PORTNAME= crossmap
DISTVERSION= 0.5.4
CATEGORIES= biology python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
DISTNAME= CrossMap-${DISTVERSION}
MAINTAINER= jwb@FreeBSD.org
COMMENT= Lift over genomics coordinates between assemblies
LICENSE= GPLv2
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}nose>0.10.4:devel/py-nose@${PY_FLAVOR}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}bx-python>0:biology/py-bx-python@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pyBigWig>0:biology/py-bigwig@${PY_FLAVOR}
USES= python:3.5+
USE_PYTHON= autoplist concurrent cython distutils
NO_ARCH= yes
.include <bsd.port.mk>
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