Add new port: deskutils/docear.

Docear – The Academic Literature Suite
Docear (pronounced dog-ear) integrates everything you need to search,
organize and create academic literature in a single application: a
digital library, reference manager, PDF and file manager, note taking
and mind mapping.  And the best: Docear works seemlessly with many
existing tools like Mendeley, Microsoft Word, and Foxit Reader.

WWW: http://www.docear.org/

7 files changed, 320 insertions, 0 deletions

diff --git a/deskutils/docear/Makefile b/deskutils/docear/Makefile
new file mode 100644
index 000000000000..5294adc03deb
--- /dev/null
+++ b/deskutils/docear/Makefile
@@ -0,0 +1,63 @@
+# ports collection Makefile for: docear
+# Whom:			Matthias Andree <mandree@FreeBSD.org>
+# Date created:		2012-02-17
+#
+# $FreeBSD$
+#
+
+PORTNAME=	docear
+PORTVERSION=	1.0.0.b01
+CATEGORIES=	deskutils java
+MASTER_SITES=	SF/docear/1.x/${PORTVERSION:S/\.b/_beta/}
+DISTNAME=	docear_linux
+
+MAINTAINER=	mandree@FreeBSD.org
+COMMENT=	Mind Mapping tool with Reference and PDF Management
+
+LICENSE=	GPLv2
+
+BUILD_DEPENDS=	update-mime-database:${PORTSDIR}/misc/shared-mime-info
+RUN_DEPENDS=	update-mime-database:${PORTSDIR}/misc/shared-mime-info
+
+USE_JAVA=	yes
+USE_GNOME=	desktopfileutils
+JAVA_VENDOR=	freebsd openjdk bsdjava
+JAVA_VERSION=	1.6
+NO_BUILD=	yes
+JDATADIR=	${JAVASHAREDIR}/${PORTNAME}
+icon=		${DATADIR}/${PORTNAME}-icon48x48.png
+
+WRKSRC=		${WRKDIR}/docear-1.0.0_beta_build31
+SUB_FILES=	docear.desktop
+
+post-patch:
+		${REINPLACE_CMD} -e 's/readlink -mn/readlink -n/g' \
+		    -e 's,#!/bin/bash,#!/bin/sh,' \
+		    ${WRKSRC}/docear.sh
+
+do-install:
+		@${RM} -f ${WRKSRC}/docear.bat \
+			${WRKSRC}/docear.exe \
+			${WRKSRC}/*.bak
+# We can't install into $DOCSDIR or support NOPORTDOCS
+# since the documentation is an integral part of the
+# installation, as online help via the program menus.
+		${MKDIR} ${JDATADIR}
+		(cd ${WRKSRC} && ${COPYTREE_SHARE} \* ${JDATADIR})
+		${PRINTF} '#!/bin/sh\nset -eu\nexport JAVA_HOME="%s"\ncd "%s"\nexec "%s" "$$@"\n' \
+		    '${JAVA_HOME}' '${JDATADIR}' '${JDATADIR}/docear.sh' \
+		    >${PREFIX}/bin/${PORTNAME}
+		${CHMOD} a=rx ${JDATADIR}/docear.sh \
+		    ${PREFIX}/bin/${PORTNAME}
+		${MKDIR} ${DATADIR}
+		${INSTALL_DATA} ${FILESDIR}/docear48.png "${icon}"
+		${MKDIR} ${DESKTOPDIR}
+		${INSTALL_DATA} ${WRKDIR}/${PORTNAME}.desktop ${DESKTOPDIR}
+		${MKDIR} ${PREFIX}/share/mime/packages
+		${INSTALL_DATA} ${FILESDIR}/${PORTNAME}.xml ${PREFIX}/share/mime/packages/
+
+post-install:
+	        -update-desktop-database > /dev/null
+	        -update-mime-database ${PREFIX}/share/mime > /dev/null
+
+.include <bsd.port.mk>
diff --git a/deskutils/docear/distinfo b/deskutils/docear/distinfo
new file mode 100644
index 000000000000..87b098d41ac0
--- /dev/null
+++ b/deskutils/docear/distinfo
@@ -0,0 +1,2 @@
+SHA256 (docear_linux.tar.gz) = ff1d1e41cb077df866996d0c288d6a4bd6dc7f12f86be8f10da05c2a2dae1359
+SIZE (docear_linux.tar.gz) = 32626980
diff --git a/deskutils/docear/files/docear.desktop.in b/deskutils/docear/files/docear.desktop.in
new file mode 100644
index 000000000000..34a1e9f7fe16
--- /dev/null
+++ b/deskutils/docear/files/docear.desktop.in
@@ -0,0 +1,11 @@
+[Desktop Entry]
+Type=Application
+Version=1.0
+Encoding=UTF-8
+Name=Docear
+Comment=Academic literature suite: Digital library, reference manager, PDF and file manager, note taking and mind mapping
+Icon=%%PREFIX%%/share/docear/docear-icon48x48.png
+Exec=%%PREFIX%%/bin/docear %f
+MimeTypes=text/x-docear;
+Categories=Education;Science;
+StartupNotify=false
diff --git a/deskutils/docear/files/docear.xml b/deskutils/docear/files/docear.xml
new file mode 100644
index 000000000000..91f7612ce1dc
--- /dev/null
+++ b/deskutils/docear/files/docear.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0"?>
+<mime-info xmlns='http://www.freedesktop.org/standards/shared-mime-info'>
+    <mime-type type="text/x-docear">
+	<comment>Freeplane or Docear mind map file</comment>
+	<glob pattern="*.mm"/>
+	<sub-class-of type="application/xml"/>
+    </mime-type>
+</mime-info>
diff --git a/deskutils/docear/files/docear48.png b/deskutils/docear/files/docear48.png
new file mode 100644
index 000000000000..7a78a9616da9
--- /dev/null
+++ b/deskutils/docear/files/docear48.png
diff --git a/deskutils/docear/pkg-descr b/deskutils/docear/pkg-descr
new file mode 100644
index 000000000000..69c79e2396a8
--- /dev/null
+++ b/deskutils/docear/pkg-descr
@@ -0,0 +1,8 @@
+Docear – The Academic Literature Suite
+Docear (pronounced dog-ear) integrates everything you need to search,
+organize and create academic literature in a single application: a
+digital library, reference manager, PDF and file manager, note taking
+and mind mapping.  And the best: Docear works seemlessly with many
+existing tools like Mendeley, Microsoft Word, and Foxit Reader.
+
+WWW: http://www.docear.org/
diff --git a/deskutils/docear/pkg-plist b/deskutils/docear/pkg-plist
new file mode 100644
index 000000000000..72d022aaf834
--- /dev/null
+++ b/deskutils/docear/pkg-plist
@@ -0,0 +1,228 @@
+bin/docear
+share/applications/docear.desktop
+share/docear/docear-icon48x48.png
+@exec %%LOCALBASE%%/bin/update-desktop-database > /dev/null || :
+@exec %%LOCALBASE%%/bin/update-mime-database %D/share/mime
+share/java/docear/bzrinfo.txt
+share/java/docear/core/org.freeplane.core/META-INF/MANIFEST.MF
+share/java/docear/core/org.freeplane.core/lib/SimplyHTML.jar
+share/java/docear/core/org.freeplane.core/lib/commons-lang-2.0.jar
+share/java/docear/core/org.freeplane.core/lib/forms-1.2.1.jar
+share/java/docear/core/org.freeplane.core/lib/freeplaneeditor.jar
+share/java/docear/core/org.freeplane.core/lib/freeplanemac.jar
+share/java/docear/core/org.freeplane.core/lib/freeplaneosgi.jar
+share/java/docear/core/org.freeplane.core/lib/freeplaneviewer.jar
+share/java/docear/core/org.freeplane.core/lib/gnu-regexp-1.1.4.jar
+share/java/docear/core/org.freeplane.core/lib/jortho.jar
+share/java/docear/doc/FilterConsumer.jpg
+share/java/docear/doc/FilterConsumerEnd.jpg
+share/java/docear/doc/FilterConsumerUnfold.jpg
+share/java/docear/doc/docear-welcome.mm
+share/java/docear/doc/examplepicture_nl.JPG
+share/java/docear/doc/freeplane.mm
+share/java/docear/doc/freeplaneApplications.mm
+share/java/docear/doc/freeplaneApplications.png
+share/java/docear/doc/freeplaneApplications_nl.mm
+share/java/docear/doc/freeplaneFunctions.mm
+share/java/docear/doc/freeplaneFunctions_ja.mm
+share/java/docear/doc/freeplaneFunctions_nl.mm
+share/java/docear/doc/freeplaneTutorial.jpg
+share/java/docear/doc/freeplaneTutorial.mm
+share/java/docear/doc/freeplaneTutorial.mmfilter
+share/java/docear/doc/freeplaneTutorial_ja.mm
+share/java/docear/doc/freeplaneTutorial_ja.mmfilter
+share/java/docear/doc/freeplaneTutorial_nl.jpg
+share/java/docear/doc/freeplaneTutorial_nl.mm
+share/java/docear/doc/freeplaneTutorial_nl.mmfilter
+share/java/docear/doc/freeplane_de.mm
+share/java/docear/doc/freeplane_es.mm
+share/java/docear/doc/freeplane_et.mm
+share/java/docear/doc/freeplane_fr.mm
+share/java/docear/doc/freeplane_functionality_nl.jpg
+share/java/docear/doc/freeplane_functionality_nl.mm
+share/java/docear/doc/freeplane_id.mm
+share/java/docear/doc/freeplane_it.mm
+share/java/docear/doc/freeplane_ja.mm
+share/java/docear/doc/freeplane_menuposition_nl.jpg
+share/java/docear/doc/freeplane_nl.jpg
+share/java/docear/doc/freeplane_ru.mm
+share/java/docear/doc/freeplane_vi.mm
+share/java/docear/doc/history_en.txt
+share/java/docear/docear.png
+share/java/docear/docear.sh
+share/java/docear/framework.jar
+share/java/docear/init.xargs
+share/java/docear/license.txt
+share/java/docear/plugins/org.docear.plugin.backup/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.docear.plugin.backup/lib/plugin.jar
+share/java/docear/plugins/org.docear.plugin.bibtex/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/JabRef-2.7.1.jar
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.core/plugin.xml
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/build.xml
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/plugin.xml
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates/misq.article.layout
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates/misq.begin.layout
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates/misq.book.layout
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates/misq.end.layout
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates/misq.layout
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates/readme.txt
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/readme.txt
+share/java/docear/plugins/org.docear.plugin.bibtex/lib/plugin.jar
+share/java/docear/plugins/org.docear.plugin.communications/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.docear.plugin.communications/lib/jersey-client-1.1.5.1.jar
+share/java/docear/plugins/org.docear.plugin.communications/lib/jersey-core-1.1.5.1.jar
+share/java/docear/plugins/org.docear.plugin.communications/lib/jersey-multipart-1.1.5.1.jar
+share/java/docear/plugins/org.docear.plugin.communications/lib/jsr311-api-1.1.1.jar
+share/java/docear/plugins/org.docear.plugin.communications/lib/mimepull-1.3.jar
+share/java/docear/plugins/org.docear.plugin.communications/lib/plugin.jar
+share/java/docear/plugins/org.docear.plugin.core/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.docear.plugin.core/lib/JHyperlink.jar
+share/java/docear/plugins/org.docear.plugin.core/lib/plugin.jar
+share/java/docear/plugins/org.docear.plugin.core/lib/swingworker-backport.jar
+share/java/docear/plugins/org.docear.plugin.core/license.txt
+share/java/docear/plugins/org.docear.plugin.optionpane/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.docear.plugin.optionpane/lib/plugin.jar
+share/java/docear/plugins/org.docear.plugin.pdfutilities/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.docear.plugin.pdfutilities/lib/jpod/iscwt.jar
+share/java/docear/plugins/org.docear.plugin.pdfutilities/lib/jpod/isrt.jar
+share/java/docear/plugins/org.docear.plugin.pdfutilities/lib/jpod/jPod.jar
+share/java/docear/plugins/org.docear.plugin.pdfutilities/lib/jpod/jbig2.jar
+share/java/docear/plugins/org.docear.plugin.pdfutilities/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.accountmanager/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.accountmanager/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.bugreport/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.bugreport/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.formula/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.formula/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.latex/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.latex/lib/LICENSE
+share/java/docear/plugins/org.freeplane.plugin.latex/lib/README
+share/java/docear/plugins/org.freeplane.plugin.latex/lib/jlatexmath.jar
+share/java/docear/plugins/org.freeplane.plugin.latex/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.script/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.script/lib/groovy-all-1.8.2-LICENSE.txt
+share/java/docear/plugins/org.freeplane.plugin.script/lib/groovy-all-1.8.2.jar
+share/java/docear/plugins/org.freeplane.plugin.script/lib/jsyntaxpane/jsyntaxpane-jdk5.jar
+share/java/docear/plugins/org.freeplane.plugin.script/lib/jsyntaxpane/jsyntaxpane.jar
+share/java/docear/plugins/org.freeplane.plugin.script/lib/jsyntaxpane/nodehighlighter.jar
+share/java/docear/plugins/org.freeplane.plugin.script/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-anim.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-awt-util.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-bridge.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-codec.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-css.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-dom.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-ext.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-extension.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-gui-util.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-gvt.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-parser.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-script.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-svg-dom.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-svggen.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-swing.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-transcoder.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-util.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/batik-xml.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/js.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/pdf-transcoder.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/plugin.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/xerces_2_5_0.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/xml-apis-ext.jar
+share/java/docear/plugins/org.freeplane.plugin.svg/lib/xml-apis.jar
+share/java/docear/plugins/org.freeplane.plugin.workspace/META-INF/MANIFEST.MF
+share/java/docear/plugins/org.freeplane.plugin.workspace/lib/commons-io-2.0.1.jar
+share/java/docear/plugins/org.freeplane.plugin.workspace/lib/plugin.jar
+share/java/docear/props.xargs
+share/java/docear/resources/bzrinfo.properties
+share/java/docear/resources/ortho/dictionary_de.ortho
+share/java/docear/resources/ortho/dictionary_en.ortho
+share/java/docear/resources/ortho/dictionary_fr.ortho
+share/java/docear/resources/templates/conceptMap.mm
+share/java/docear/resources/templates/essay.mm
+share/java/docear/resources/templates/standard.mm
+share/java/docear/resources/xslt/mm2freeplane1_1-mm.xsl
+share/java/docear/resources/xslt/mm2html.xsl
+share/java/docear/resources/xslt/mm2latexartcl.xsl
+share/java/docear/resources/xslt/mm2latexbook.xsl
+share/java/docear/resources/xslt/mm2latexinput.xsl
+share/java/docear/resources/xslt/mm2msp_utf8.xsl
+share/java/docear/resources/xslt/mm2msp_utf8_TEMPLATE.mm
+share/java/docear/resources/xslt/mm2mwiki.xsl
+share/java/docear/resources/xslt/mm2oowriter.manifest.xsl
+share/java/docear/resources/xslt/mm2oowriter.xsl
+share/java/docear/resources/xslt/mm2opml.xsl
+share/java/docear/resources/xslt/mm2text.xsl
+share/java/docear/resources/xslt/mm2wordml_utf8.xsl
+share/java/docear/resources/xslt/mm2wordml_utf8_TEMPLATE.mm
+share/java/docear/resources/xslt/mm2xbel.xsl
+share/java/docear/resources/xslt/mm2xls_utf8.xsl
+share/java/docear/resources/xslt/tohtml.xsl
+share/java/docear/resources/xslt/xbel2mm.xsl
+share/java/docear/scripts/apiGenerator.groovy
+share/java/docear/scripts/freeplane.dsld
+share/java/docear/scripts/installScriptAddOn.groovy
+share/mime/packages/docear.xml
+share/mime/text/x-docear.xml
+@dirrm share/java/docear/scripts
+@dirrm share/java/docear/resources/xslt
+@dirrm share/java/docear/resources/templates
+@dirrm share/java/docear/resources/ortho
+@dirrmtry share/java/docear/resources/accelerators
+@dirrm share/java/docear/resources
+@dirrm share/java/docear/plugins/org.freeplane.plugin.workspace/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.workspace/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.workspace
+@dirrm share/java/docear/plugins/org.freeplane.plugin.svg/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.svg/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.svg
+@dirrm share/java/docear/plugins/org.freeplane.plugin.script/lib/jsyntaxpane
+@dirrm share/java/docear/plugins/org.freeplane.plugin.script/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.script/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.script
+@dirrm share/java/docear/plugins/org.freeplane.plugin.latex/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.latex/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.latex
+@dirrm share/java/docear/plugins/org.freeplane.plugin.formula/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.formula/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.formula
+@dirrm share/java/docear/plugins/org.freeplane.plugin.bugreport/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.bugreport/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.bugreport
+@dirrm share/java/docear/plugins/org.freeplane.plugin.accountmanager/lib
+@dirrm share/java/docear/plugins/org.freeplane.plugin.accountmanager/META-INF
+@dirrm share/java/docear/plugins/org.freeplane.plugin.accountmanager
+@dirrm share/java/docear/plugins/org.docear.plugin.pdfutilities/lib/jpod
+@dirrm share/java/docear/plugins/org.docear.plugin.pdfutilities/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.pdfutilities/META-INF
+@dirrm share/java/docear/plugins/org.docear.plugin.pdfutilities
+@dirrm share/java/docear/plugins/org.docear.plugin.optionpane/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.optionpane/META-INF
+@dirrm share/java/docear/plugins/org.docear.plugin.optionpane
+@dirrm share/java/docear/plugins/org.docear.plugin.core/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.core/META-INF
+@dirrm share/java/docear/plugins/org.docear.plugin.core
+@dirrm share/java/docear/plugins/org.docear.plugin.communications/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.communications/META-INF
+@dirrm share/java/docear/plugins/org.docear.plugin.communications
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq/templates
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.export.misq
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins/net.sf.jabref.core
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib/plugins
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/lib/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex/META-INF
+@dirrm share/java/docear/plugins/org.docear.plugin.bibtex
+@dirrm share/java/docear/plugins/org.docear.plugin.backup/lib
+@dirrm share/java/docear/plugins/org.docear.plugin.backup/META-INF
+@dirrm share/java/docear/plugins/org.docear.plugin.backup
+@dirrm share/java/docear/plugins
+@dirrm share/java/docear/doc
+@dirrm share/java/docear/core/org.freeplane.core/lib
+@dirrm share/java/docear/core/org.freeplane.core/META-INF
+@dirrm share/java/docear/core/org.freeplane.core
+@dirrm share/java/docear/core
+@dirrm share/java/docear
+@unexec %%LOCALBASE%%/bin/update-desktop-database > /dev/null || :
+@unexec %%LOCALBASE%%/bin/update-mime-database %D/share/mime