- Update to 2.10.1

Submitted by:	"b. f." <bf1783@googlemail.com>
Thanks to:	wen@

3 files changed, 161 insertions, 8495 deletions

diff --git a/math/R/Makefile b/math/R/Makefile
index fb838735c89b..75a98a2ebc78 100644
--- a/math/R/Makefile
+++ b/math/R/Makefile
@@ -7,8 +7,7 @@
 #
 
 PORTNAME=	R
-PORTVERSION=	2.9.2
-PORTREVISION=	1
+PORTVERSION=	2.10.1
 CATEGORIES=	math lang
 MASTER_SITES=	http://cran.r-project.org/src/base/R-2/ \
 		ftp://cran.r-project.org/pub/R/src/base/R-2/ \
@@ -58,7 +57,7 @@ GNU_CONFIGURE=	yes
 USE_ICONV=	yes
 USE_PERL5=	yes
 CONFIGURE_ENV=	INSTALL_DATA="${INSTALL} ${COPY} ${_SHROWNGRP} -m 644" \
-		FCFLAGS="${FFLAGS}"
+		FCFLAGS="${FFLAGS}" TAR="${TAR}"
 CONFIGURE_ARGS=	--enable-R-shlib --with-system-bzlib --with-system-zlib \
 		rdocdir=${DOCSDIR}
 
@@ -72,7 +71,7 @@ CONFIGURE_ARGS+=--with-blas="-lf77blas -latlas"
 CONFIGURE_ARGS+=--with-lapack="-lalapack -lcblas"
 .endif
 .else
-LIB_DEPENDS+=	blas.2:${PORTSDIR}/math/blas	\
+LIB_DEPENDS+=	blas.2:${PORTSDIR}/math/blas \
 		lapack.4:${PORTSDIR}/math/lapack
 CONFIGURE_ARGS+=--with-blas="-lblas" --with-lapack="-llapack -lblas"
 .endif
@@ -183,8 +182,6 @@ post-patch:
 		${WRKSRC}/configure \
 		${WRKSRC}/config.site \
 		${WRKSRC}/src/extra/tzone/tzfile.h \
-		${WRKSRC}/src/library/base/man/Startup.Rd \
-		${WRKSRC}/src/library/profile/Rprofile.unix \
 		${WRKSRC}/src/scripts/javareconf
 .if defined(WITHOUT_NLS)
 	@(cd ${WRKSRC}/src/library/Recommended; \
diff --git a/math/R/distinfo b/math/R/distinfo
index 72f5f4b7b8b5..f6056a2a6398 100644
--- a/math/R/distinfo
+++ b/math/R/distinfo
@@ -1,3 +1,3 @@
-MD5 (R-2.9.2.tar.gz) = 112e2a1306cf71320e45d14e87e5b913
-SHA256 (R-2.9.2.tar.gz) = 2b2bfa9edab38d2c0c9a6262767336f2f19780cb30483aedcb7c69524ec1dbb8
-SIZE (R-2.9.2.tar.gz) = 18591679
+MD5 (R-2.10.1.tar.gz) = 75f8b7e875b846ea96a4c6cc0abc00a4
+SHA256 (R-2.10.1.tar.gz) = 5ca1780d9f47f2f4a9b52ba44fed9ee6e7d3547f18ed2c05192b0dbc56038e9d
+SIZE (R-2.10.1.tar.gz) = 19705604
diff --git a/math/R/pkg-plist b/math/R/pkg-plist
index c076c6ba11d6..3cfc9320042b 100644
--- a/math/R/pkg-plist
+++ b/math/R/pkg-plist
@@ -12,32 +12,20 @@
 bin/R
 bin/Rscript
 %%DOCSDIR%%/html/R.css
+%%DOCSDIR%%/html/SearchOn.html
+%%DOCSDIR%%/html/Search.html
 %%DOCSDIR%%/html/about.html
+%%DOCSDIR%%/html/favicon.ico
 %%DOCSDIR%%/html/index.html
 %%DOCSDIR%%/html/left.jpg
 %%DOCSDIR%%/html/logo.jpg
 %%DOCSDIR%%/html/logosm.jpg
-%%DOCSDIR%%/html/packages-head.html
 %%DOCSDIR%%/html/packages-head-utf8.html
 %%DOCSDIR%%/html/packages.html
 %%DOCSDIR%%/html/resources.html
 %%DOCSDIR%%/html/right.jpg
-%%DOCSDIR%%/html/search/IndexEntry.class
-%%DOCSDIR%%/html/search/IndexStream.class
-%%DOCSDIR%%/html/search/IndexTable.class
-%%DOCSDIR%%/html/search/SearchEngine.class
-%%DOCSDIR%%/html/search/SearchEngine-foot.html
-%%DOCSDIR%%/html/search/SearchEngine-head.html
-%%DOCSDIR%%/html/search/SearchEngine.html
-%%DOCSDIR%%/html/search/SearchObject.html
-%%DOCSDIR%%/html/search/Tracer.class
-%%DOCSDIR%%/html/search/Value.class
-%%DOCSDIR%%/html/search/index.txt
-%%DOCSDIR%%/html/thanks.html
 %%DOCSDIR%%/html/up.jpg
 lib/R/COPYING
-lib/R/%%DATADIR%%/nspackloader.R
-lib/R/%%DATADIR%%/packloader.R
 lib/R/NEWS
 lib/R/SVN-REVISION
 lib/R/bin/BATCH
@@ -48,7 +36,6 @@ lib/R/bin/R
 lib/R/bin/REMOVE
 lib/R/bin/Rcmd
 lib/R/bin/Rd2dvi
-lib/R/bin/Rd2txt
 lib/R/bin/Rdconv
 lib/R/bin/Rdiff
 lib/R/bin/Rprof
@@ -113,60 +100,35 @@ lib/R/include/Rmath.h
 lib/R/include/Rversion.h
 lib/R/include/S.h
 lib/R/lib/libR.so
-lib/R/library/KernSmooth/CONTENTS
 lib/R/library/KernSmooth/DESCRIPTION
 lib/R/library/KernSmooth/INDEX
 lib/R/library/KernSmooth/LICENCE
 lib/R/library/KernSmooth/Meta/Rd.rds
 lib/R/library/KernSmooth/Meta/hsearch.rds
+lib/R/library/KernSmooth/Meta/links.rds
 lib/R/library/KernSmooth/Meta/nsInfo.rds
 lib/R/library/KernSmooth/Meta/package.rds
 lib/R/library/KernSmooth/NAMESPACE
 lib/R/library/KernSmooth/R/KernSmooth
 lib/R/library/KernSmooth/R/KernSmooth.rdb
 lib/R/library/KernSmooth/R/KernSmooth.rdx
-lib/R/library/KernSmooth/R-ex/bkde2D.R
-lib/R/library/KernSmooth/R-ex/bkde.R
-lib/R/library/KernSmooth/R-ex/bkfe.R
-lib/R/library/KernSmooth/R-ex/dpih.R
-lib/R/library/KernSmooth/R-ex/dpik.R
-lib/R/library/KernSmooth/R-ex/dpill.R
-lib/R/library/KernSmooth/R-ex/locpoly.R
 lib/R/library/KernSmooth/help/AnIndex
-lib/R/library/KernSmooth/help/bkde
-lib/R/library/KernSmooth/help/bkde2D
-lib/R/library/KernSmooth/help/bkfe
-lib/R/library/KernSmooth/help/dpih
-lib/R/library/KernSmooth/help/dpik
-lib/R/library/KernSmooth/help/dpill
-lib/R/library/KernSmooth/help/locpoly
+lib/R/library/KernSmooth/help/KernSmooth.rdb
+lib/R/library/KernSmooth/help/KernSmooth.rdx
+lib/R/library/KernSmooth/help/aliases.rds
+lib/R/library/KernSmooth/help/paths.rds
 lib/R/library/KernSmooth/html/00Index.html
-lib/R/library/KernSmooth/html/bkde2D.html
-lib/R/library/KernSmooth/html/bkde.html
-lib/R/library/KernSmooth/html/bkfe.html
-lib/R/library/KernSmooth/html/dpih.html
-lib/R/library/KernSmooth/html/dpik.html
-lib/R/library/KernSmooth/html/dpill.html
-lib/R/library/KernSmooth/html/locpoly.html
-lib/R/library/KernSmooth/latex/bkde2D.tex
-lib/R/library/KernSmooth/latex/bkde.tex
-lib/R/library/KernSmooth/latex/bkfe.tex
-lib/R/library/KernSmooth/latex/dpih.tex
-lib/R/library/KernSmooth/latex/dpik.tex
-lib/R/library/KernSmooth/latex/dpill.tex
-lib/R/library/KernSmooth/latex/locpoly.tex
 lib/R/library/KernSmooth/libs/KernSmooth.so
-lib/R/library/KernSmooth/man/KernSmooth.Rd.gz
 %%NLS%%lib/R/library/KernSmooth/po/de/LC_MESSAGES/R-KernSmooth.mo
 %%NLS%%lib/R/library/KernSmooth/po/en@quot/LC_MESSAGES/R-KernSmooth.mo
 lib/R/library/MASS/CITATION
-lib/R/library/MASS/CONTENTS
 lib/R/library/MASS/DESCRIPTION
 lib/R/library/MASS/INDEX
 lib/R/library/MASS/LICENCE
 lib/R/library/MASS/Meta/Rd.rds
 lib/R/library/MASS/Meta/data.rds
 lib/R/library/MASS/Meta/hsearch.rds
+lib/R/library/MASS/Meta/links.rds
 lib/R/library/MASS/Meta/nsInfo.rds
 lib/R/library/MASS/Meta/package.rds
 lib/R/library/MASS/NAMESPACE
@@ -174,564 +136,16 @@ lib/R/library/MASS/NEWS
 lib/R/library/MASS/R/MASS
 lib/R/library/MASS/R/MASS.rdb
 lib/R/library/MASS/R/MASS.rdx
-lib/R/library/MASS/R-ex/Insurance.R
-lib/R/library/MASS/R-ex/Null.R
-lib/R/library/MASS/R-ex/OME.R
-lib/R/library/MASS/R-ex/Skye.R
-lib/R/library/MASS/R-ex/addterm.R
-lib/R/library/MASS/R-ex/anova.negbin.R
-lib/R/library/MASS/R-ex/area.R
-lib/R/library/MASS/R-ex/bacteria.R
-lib/R/library/MASS/R-ex/bandwidth.nrd.R
-lib/R/library/MASS/R-ex/bcv.R
-lib/R/library/MASS/R-ex/beav1.R
-lib/R/library/MASS/R-ex/beav2.R
-lib/R/library/MASS/R-ex/birthwt.R
-lib/R/library/MASS/R-ex/boxcox.R
-lib/R/library/MASS/R-ex/caith.R
-lib/R/library/MASS/R-ex/cement.R
-lib/R/library/MASS/R-ex/confint.R
-lib/R/library/MASS/R-ex/contr.sdif.R
-lib/R/library/MASS/R-ex/corresp.R
-lib/R/library/MASS/R-ex/cov.rob.R
-lib/R/library/MASS/R-ex/cov.trob.R
-lib/R/library/MASS/R-ex/denumerate.R
-lib/R/library/MASS/R-ex/dose.p.R
-lib/R/library/MASS/R-ex/dropterm.R
-lib/R/library/MASS/R-ex/eagles.R
-lib/R/library/MASS/R-ex/epil.R
-lib/R/library/MASS/R-ex/farms.R
-lib/R/library/MASS/R-ex/fitdistr.R
-lib/R/library/MASS/R-ex/fractions.R
-lib/R/library/MASS/R-ex/galaxies.R
-lib/R/library/MASS/R-ex/gamma.shape.glm.R
-lib/R/library/MASS/R-ex/gehan.R
-lib/R/library/MASS/R-ex/ginv.R
-lib/R/library/MASS/R-ex/glm.convert.R
-lib/R/library/MASS/R-ex/glmmPQL.R
-lib/R/library/MASS/R-ex/glm.nb.R
-lib/R/library/MASS/R-ex/housing.R
-lib/R/library/MASS/R-ex/huber.R
-lib/R/library/MASS/R-ex/hubers.R
-lib/R/library/MASS/R-ex/immer.R
-lib/R/library/MASS/R-ex/isoMDS.R
-lib/R/library/MASS/R-ex/kde2d.R
-lib/R/library/MASS/R-ex/lda.R
-lib/R/library/MASS/R-ex/leuk.R
-lib/R/library/MASS/R-ex/lm.ridge.R
-lib/R/library/MASS/R-ex/loglm.R
-lib/R/library/MASS/R-ex/logtrans.R
-lib/R/library/MASS/R-ex/lqs.R
-lib/R/library/MASS/R-ex/mca.R
-lib/R/library/MASS/R-ex/menarche.R
-lib/R/library/MASS/R-ex/motors.R
-lib/R/library/MASS/R-ex/muscle.R
-lib/R/library/MASS/R-ex/mvrnorm.R
-lib/R/library/MASS/R-ex/negative.binomial.R
-lib/R/library/MASS/R-ex/nlschools.R
-lib/R/library/MASS/R-ex/npk.R
-lib/R/library/MASS/R-ex/oats.R
-lib/R/library/MASS/R-ex/parcoord.R
-lib/R/library/MASS/R-ex/petrol.R
-lib/R/library/MASS/R-ex/plot.mca.R
-lib/R/library/MASS/R-ex/plot.profile.R
-lib/R/library/MASS/R-ex/polr.R
-lib/R/library/MASS/R-ex/predict.glmmPQL.R
-lib/R/library/MASS/R-ex/predict.lda.R
-lib/R/library/MASS/R-ex/predict.lqs.R
-lib/R/library/MASS/R-ex/predict.qda.R
-lib/R/library/MASS/R-ex/profile.glm.R
-lib/R/library/MASS/R-ex/qda.R
-lib/R/library/MASS/R-ex/rational.R
-lib/R/library/MASS/R-ex/renumerate.R
-lib/R/library/MASS/R-ex/rlm.R
-lib/R/library/MASS/R-ex/rms.curv.R
-lib/R/library/MASS/R-ex/rnegbin.R
-lib/R/library/MASS/R-ex/sammon.R
-lib/R/library/MASS/R-ex/stepAIC.R
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-lib/R/library/MASS/R-ex/summary.rlm.R
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-lib/R/library/MASS/R-ex/waders.R
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-lib/R/library/MASS/R-ex/wtloss.R
 lib/R/library/MASS/data/Rdata.rdb
 lib/R/library/MASS/data/Rdata.rds
 lib/R/library/MASS/data/Rdata.rdx
-lib/R/library/MASS/help/Aids2
 lib/R/library/MASS/help/AnIndex
-lib/R/library/MASS/help/Animals
-lib/R/library/MASS/help/Boston
-lib/R/library/MASS/help/Cars93
-lib/R/library/MASS/help/Cushings
-lib/R/library/MASS/help/DDT
-lib/R/library/MASS/help/GAGurine
-lib/R/library/MASS/help/Insurance
-lib/R/library/MASS/help/MASS-internal
-lib/R/library/MASS/help/Melanoma
-lib/R/library/MASS/help/Null
-lib/R/library/MASS/help/OME
-lib/R/library/MASS/help/Pima.tr
-lib/R/library/MASS/help/Rabbit
-lib/R/library/MASS/help/Rubber
-lib/R/library/MASS/help/SP500
-lib/R/library/MASS/help/Sitka
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-lib/R/library/MASS/help/Skye
-lib/R/library/MASS/help/Traffic
-lib/R/library/MASS/help/UScereal
-lib/R/library/MASS/help/UScrime
-lib/R/library/MASS/help/VA
-lib/R/library/MASS/help/abbey
-lib/R/library/MASS/help/accdeaths
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-lib/R/library/MASS/help/biopsy
-lib/R/library/MASS/help/birthwt
-lib/R/library/MASS/help/boxcox
-lib/R/library/MASS/help/cabbages
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-lib/R/library/MASS/help/cats
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-lib/R/library/MASS/help/chem
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-lib/R/library/MASS/help/mammals
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-lib/R/library/MASS/help/motors
-lib/R/library/MASS/help/muscle
-lib/R/library/MASS/help/mvrnorm
-lib/R/library/MASS/help/negative.binomial
-lib/R/library/MASS/help/newcomb
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-lib/R/library/MASS/help/width.SJ
-lib/R/library/MASS/help/write.matrix
-lib/R/library/MASS/help/wtloss
+lib/R/library/MASS/help/MASS.rdb
+lib/R/library/MASS/help/MASS.rdx
+lib/R/library/MASS/help/aliases.rds
+lib/R/library/MASS/help/paths.rds
 lib/R/library/MASS/html/00Index.html
-lib/R/library/MASS/html/Aids2.html
-lib/R/library/MASS/html/Animals.html
-lib/R/library/MASS/html/Boston.html
-lib/R/library/MASS/html/Cars93.html
-lib/R/library/MASS/html/Cushings.html
-lib/R/library/MASS/html/DDT.html
-lib/R/library/MASS/html/GAGurine.html
-lib/R/library/MASS/html/Insurance.html
-lib/R/library/MASS/html/MASS-internal.html
-lib/R/library/MASS/html/Melanoma.html
-lib/R/library/MASS/html/Null.html
-lib/R/library/MASS/html/OME.html
-lib/R/library/MASS/html/Pima.tr.html
-lib/R/library/MASS/html/Rabbit.html
-lib/R/library/MASS/html/Rubber.html
-lib/R/library/MASS/html/SP500.html
-lib/R/library/MASS/html/Sitka89.html
-lib/R/library/MASS/html/Sitka.html
-lib/R/library/MASS/html/Skye.html
-lib/R/library/MASS/html/Traffic.html
-lib/R/library/MASS/html/UScereal.html
-lib/R/library/MASS/html/UScrime.html
-lib/R/library/MASS/html/VA.html
-lib/R/library/MASS/html/abbey.html
-lib/R/library/MASS/html/accdeaths.html
-lib/R/library/MASS/html/addterm.html
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-lib/R/library/MASS/html/bcv.html
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-lib/R/library/grDevices/latex/x11Fonts.tex
-lib/R/library/grDevices/latex/x11.tex
-lib/R/library/grDevices/latex/xfig.tex
-lib/R/library/grDevices/latex/xyTable.tex
-lib/R/library/grDevices/latex/xy.coords.tex
-lib/R/library/grDevices/latex/xyz.coords.tex
 lib/R/library/grDevices/libs/grDevices.so
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 %%NLS%%lib/R/library/grDevices/po/de/LC_MESSAGES/R-grDevices.mo
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 %%NLS%%lib/R/library/grDevices/po/en_GB/LC_MESSAGES/R-grDevices.mo
@@ -4185,79 +547,15 @@ lib/R/library/grDevices/man/grDevices.Rd.gz
 %%NLS%%lib/R/library/grDevices/po/ru/LC_MESSAGES/grDevices.mo
 %%NLS%%lib/R/library/grDevices/po/zh_CN/LC_MESSAGES/R-grDevices.mo
 %%NLS%%lib/R/library/grDevices/po/zh_CN/LC_MESSAGES/grDevices.mo
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 lib/R/library/graphics/DESCRIPTION
 lib/R/library/graphics/INDEX
 lib/R/library/graphics/Meta/Rd.rds
 lib/R/library/graphics/Meta/demo.rds
 lib/R/library/graphics/Meta/hsearch.rds
+lib/R/library/graphics/Meta/links.rds
 lib/R/library/graphics/Meta/nsInfo.rds
 lib/R/library/graphics/Meta/package.rds
 lib/R/library/graphics/NAMESPACE
-lib/R/library/graphics/R-ex/abline.R
-lib/R/library/graphics/R-ex/arrows.R
-lib/R/library/graphics/R-ex/assocplot.R
-lib/R/library/graphics/R-ex/axTicks.R
-lib/R/library/graphics/R-ex/axis.POSIXct.R
-lib/R/library/graphics/R-ex/axis.R
-lib/R/library/graphics/R-ex/barplot.R
-lib/R/library/graphics/R-ex/box.R
-lib/R/library/graphics/R-ex/boxplot.R
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-lib/R/library/graphics/R-ex/bxp.R
-lib/R/library/graphics/R-ex/cdplot.R
-lib/R/library/graphics/R-ex/clip.R
-lib/R/library/graphics/R-ex/contour.R
-lib/R/library/graphics/R-ex/convertXY.R
-lib/R/library/graphics/R-ex/coplot.R
-lib/R/library/graphics/R-ex/curve.R
-lib/R/library/graphics/R-ex/dotchart.R
-lib/R/library/graphics/R-ex/filled.contour.R
-lib/R/library/graphics/R-ex/fourfoldplot.R
-lib/R/library/graphics/R-ex/grid.R
-lib/R/library/graphics/R-ex/hist.POSIXt.R
-lib/R/library/graphics/R-ex/hist.R
-lib/R/library/graphics/R-ex/identify.R
-lib/R/library/graphics/R-ex/image.R
-lib/R/library/graphics/R-ex/layout.R
-lib/R/library/graphics/R-ex/legend.R
-lib/R/library/graphics/R-ex/lines.R
-lib/R/library/graphics/R-ex/matplot.R
-lib/R/library/graphics/R-ex/mosaicplot.R
-lib/R/library/graphics/R-ex/mtext.R
-lib/R/library/graphics/R-ex/pairs.R
-lib/R/library/graphics/R-ex/panel.smooth.R
-lib/R/library/graphics/R-ex/par.R
-lib/R/library/graphics/R-ex/persp.R
-lib/R/library/graphics/R-ex/pie.R
-lib/R/library/graphics/R-ex/plot.R
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-lib/R/library/graphics/R-ex/plotdefault.R
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-lib/R/library/graphics/R-ex/plotformula.R
-lib/R/library/graphics/R-ex/plothistogram.R
-lib/R/library/graphics/R-ex/plot.table.R
-lib/R/library/graphics/R-ex/plot.window.R
-lib/R/library/graphics/R-ex/plot.xy.R
-lib/R/library/graphics/R-ex/points.R
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-lib/R/library/graphics/R-ex/spineplot.R
-lib/R/library/graphics/R-ex/stars.R
-lib/R/library/graphics/R-ex/stem.R
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-lib/R/library/graphics/R-ex/title.R
-lib/R/library/graphics/R-ex/units.R
-lib/R/library/graphics/R-ex/xspline.R
 lib/R/library/graphics/R/graphics
 lib/R/library/graphics/R/graphics.rdb
 lib/R/library/graphics/R/graphics.rdx
@@ -4268,215 +566,11 @@ lib/R/library/graphics/demo/image.R
 lib/R/library/graphics/demo/persp.R
 lib/R/library/graphics/demo/plotmath.R
 lib/R/library/graphics/help/AnIndex
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-lib/R/library/graphics/help/arrows
-lib/R/library/graphics/help/assocplot
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-lib/R/library/graphics/help/axis
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-lib/R/library/graphics/help/barplot
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-lib/R/library/graphics/help/boxplot
-lib/R/library/graphics/help/boxplot.matrix
-lib/R/library/graphics/help/bxp
-lib/R/library/graphics/help/cdplot
-lib/R/library/graphics/help/clip
-lib/R/library/graphics/help/contour
-lib/R/library/graphics/help/convertXY
-lib/R/library/graphics/help/coplot
-lib/R/library/graphics/help/curve
-lib/R/library/graphics/help/dotchart
-lib/R/library/graphics/help/filled.contour
-lib/R/library/graphics/help/fourfoldplot
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-lib/R/library/graphics/help/graphics-defunct
-lib/R/library/graphics/help/graphics-package
-lib/R/library/graphics/help/grid
-lib/R/library/graphics/help/hist
-lib/R/library/graphics/help/hist.POSIXt
-lib/R/library/graphics/help/identify
-lib/R/library/graphics/help/image
-lib/R/library/graphics/help/layout
-lib/R/library/graphics/help/legend
-lib/R/library/graphics/help/lines
-lib/R/library/graphics/help/locator
-lib/R/library/graphics/help/matplot
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-lib/R/library/graphics/help/mtext
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-lib/R/library/graphics/help/panel.smooth
-lib/R/library/graphics/help/par
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-lib/R/library/graphics/help/pie
-lib/R/library/graphics/help/plot
-lib/R/library/graphics/help/plot.dataframe
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-lib/R/library/graphics/help/plotformula
-lib/R/library/graphics/help/plothistogram
-lib/R/library/graphics/help/plot.table
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-lib/R/library/graphics/help/title
-lib/R/library/graphics/help/units
-lib/R/library/graphics/help/xspline
-lib/R/library/graphics/help/zAxis
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+lib/R/library/graphics/help/graphics.rdb
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 lib/R/library/graphics/html/00Index.html
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 %%NLS%%lib/R/library/graphics/po/en@quot/LC_MESSAGES/R-graphics.mo
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@@ -4485,53 +579,15 @@ lib/R/library/graphics/man/graphics.Rd.gz
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 lib/R/library/grid/DESCRIPTION
 lib/R/library/grid/INDEX
 lib/R/library/grid/Meta/Rd.rds
 lib/R/library/grid/Meta/hsearch.rds
+lib/R/library/grid/Meta/links.rds
 lib/R/library/grid/Meta/nsInfo.rds
 lib/R/library/grid/Meta/package.rds
 lib/R/library/grid/Meta/vignette.rds
 lib/R/library/grid/NAMESPACE
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 lib/R/library/grid/R/grid
 lib/R/library/grid/R/grid.rdb
 lib/R/library/grid/R/grid.rdx
@@ -4578,238 +634,14 @@ lib/R/library/grid/doc/viewports.R
 lib/R/library/grid/doc/viewports.Snw
 lib/R/library/grid/doc/viewports.pdf
 lib/R/library/grid/help/AnIndex
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 lib/R/library/grid/html/00Index.html
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 lib/R/library/utils/misc/exDIF.csv
 lib/R/library/utils/misc/exDIF.dif
 %%NLS%%lib/R/library/utils/po/de/LC_MESSAGES/R-utils.mo
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 lib/R/share/R/tests-startup.R
 lib/R/share/encodings/Adobe-glyphlist
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 %%NLS%%lib/R/share/locale/zh_CN/LC_MESSAGES/R.mo
@@ -9433,17 +1189,9 @@ lib/R/share/make/winshlib.mk
 lib/R/share/perl/File/Copy/Recursive.pm
 lib/R/share/perl/R/Dcf.pm
 lib/R/share/perl/R/Logfile.pm
-lib/R/share/perl/R/Rdconv.pm
-lib/R/share/perl/R/Rdlists.pm
-lib/R/share/perl/R/Rd.pm
-lib/R/share/perl/R/Rdtools.pm
 lib/R/share/perl/R/Utils.pm
 lib/R/share/perl/R/Vars.pm
-lib/R/share/perl/Text/DelimMatch.pm
-lib/R/share/perl/build-help.pl
 lib/R/share/sh/echo.sh
-lib/R/share/sh/help-links.sh
-lib/R/share/sh/help-print.sh
 lib/R/share/texmf/Rd.sty
 lib/R/share/texmf/Sweave.sty
 lib/R/share/texmf/omsaer.fd
@@ -9486,7 +1234,6 @@ lib/libR.so.0
 %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/refman.pdf
 @dirrm lib/R/share/texmf
 @dirrm lib/R/share/sh
-@dirrm lib/R/share/perl/Text
 @dirrm lib/R/share/perl/R
 @dirrm lib/R/share/perl/File/Copy
 @dirrm lib/R/share/perl/File
@@ -9500,6 +1247,8 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/share/locale/ru
 %%NLS%%@dirrm lib/R/share/locale/pt_BR/LC_MESSAGES
 %%NLS%%@dirrm lib/R/share/locale/pt_BR
+%%NLS%%@dirrm lib/R/share/locale/nn/LC_MESSAGES
+%%NLS%%@dirrm lib/R/share/locale/nn
 %%NLS%%@dirrm lib/R/share/locale/ko/LC_MESSAGES
 %%NLS%%@dirrm lib/R/share/locale/ko
 %%NLS%%@dirrm lib/R/share/locale/ja/LC_MESSAGES
@@ -9522,7 +1271,7 @@ lib/libR.so.0
 @dirrm lib/R/share/licenses
 @dirrm lib/R/share/java
 @dirrm lib/R/share/encodings
-@dirrm lib/R/%%DATADIR%%
+@dirrm lib/R/share/R
 @dirrm lib/R/share
 @dirrm lib/R/modules
 %%NLS%%@dirrm lib/R/library/utils/po/zh_CN/LC_MESSAGES
@@ -9541,12 +1290,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/utils/po/de
 %%NLS%%@dirrm lib/R/library/utils/po
 @dirrm lib/R/library/utils/misc
-@dirrm lib/R/library/utils/man
-@dirrm lib/R/library/utils/latex
 @dirrm lib/R/library/utils/html
 @dirrm lib/R/library/utils/help
 @dirrm lib/R/library/utils/Sweave
-@dirrm lib/R/library/utils/R-ex
 @dirrm lib/R/library/utils/R
 @dirrm lib/R/library/utils/Meta
 @dirrm lib/R/library/utils
@@ -9569,12 +1315,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/tools/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/tools/po/de
 %%NLS%%@dirrm lib/R/library/tools/po
-@dirrm lib/R/library/tools/man
 @dirrm lib/R/library/tools/libs
-@dirrm lib/R/library/tools/latex
 @dirrm lib/R/library/tools/html
 @dirrm lib/R/library/tools/help
-@dirrm lib/R/library/tools/R-ex
 @dirrm lib/R/library/tools/R
 @dirrm lib/R/library/tools/Meta
 @dirrm lib/R/library/tools
@@ -9597,24 +1340,18 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/tcltk/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/tcltk/po/de
 %%NLS%%@dirrm lib/R/library/tcltk/po
-@dirrm lib/R/library/tcltk/man
-@dirrm lib/R/library/tcltk/libs
-@dirrm lib/R/library/tcltk/latex
+%%TCLTK%%@dirrm lib/R/library/tcltk/libs
 @dirrm lib/R/library/tcltk/html
 @dirrm lib/R/library/tcltk/help
 @dirrm lib/R/library/tcltk/exec
 @dirrm lib/R/library/tcltk/demo
-@dirrm lib/R/library/tcltk/R-ex
 @dirrm lib/R/library/tcltk/R
 @dirrm lib/R/library/tcltk/Meta
 @dirrm lib/R/library/tcltk
-@dirrm lib/R/library/survival/man
 @dirrm lib/R/library/survival/libs
-@dirrm lib/R/library/survival/latex
 @dirrm lib/R/library/survival/html
 @dirrm lib/R/library/survival/help
 @dirrm lib/R/library/survival/data
-@dirrm lib/R/library/survival/R-ex
 @dirrm lib/R/library/survival/R
 @dirrm lib/R/library/survival/Meta
 @dirrm lib/R/library/survival
@@ -9637,13 +1374,10 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/stats/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/stats/po/de
 %%NLS%%@dirrm lib/R/library/stats/po
-@dirrm lib/R/library/stats/man
 @dirrm lib/R/library/stats/libs
-@dirrm lib/R/library/stats/latex
 @dirrm lib/R/library/stats/html
 @dirrm lib/R/library/stats/help
 @dirrm lib/R/library/stats/demo
-@dirrm lib/R/library/stats/R-ex
 @dirrm lib/R/library/stats/R
 @dirrm lib/R/library/stats/Meta
 %%NLS%%@dirrm lib/R/library/stats4/po/zh_CN/LC_MESSAGES
@@ -9665,11 +1399,8 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/stats4/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/stats4/po/de
 %%NLS%%@dirrm lib/R/library/stats4/po
-@dirrm lib/R/library/stats4/man
-@dirrm lib/R/library/stats4/latex
 @dirrm lib/R/library/stats4/html
 @dirrm lib/R/library/stats4/help
-@dirrm lib/R/library/stats4/R-ex
 @dirrm lib/R/library/stats4/R
 @dirrm lib/R/library/stats4/Meta
 @dirrm lib/R/library/stats4
@@ -9691,12 +1422,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/splines/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/splines/po/de
 %%NLS%%@dirrm lib/R/library/splines/po
-@dirrm lib/R/library/splines/man
 @dirrm lib/R/library/splines/libs
-@dirrm lib/R/library/splines/latex
 @dirrm lib/R/library/splines/html
 @dirrm lib/R/library/splines/help
-@dirrm lib/R/library/splines/R-ex
 @dirrm lib/R/library/splines/R
 @dirrm lib/R/library/splines/Meta
 @dirrm lib/R/library/splines
@@ -9708,12 +1436,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/spatial/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/spatial/po/de
 %%NLS%%@dirrm lib/R/library/spatial/po
-@dirrm lib/R/library/spatial/man
 @dirrm lib/R/library/spatial/libs
-@dirrm lib/R/library/spatial/latex
 @dirrm lib/R/library/spatial/html
 @dirrm lib/R/library/spatial/help
-@dirrm lib/R/library/spatial/R-ex
 @dirrm lib/R/library/spatial/R
 @dirrm lib/R/library/spatial/Meta
 @dirrm lib/R/library/spatial
@@ -9726,13 +1451,10 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/rpart/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/rpart/po/de
 %%NLS%%@dirrm lib/R/library/rpart/po
-@dirrm lib/R/library/rpart/man
 @dirrm lib/R/library/rpart/libs
-@dirrm lib/R/library/rpart/latex
 @dirrm lib/R/library/rpart/html
 @dirrm lib/R/library/rpart/help
 @dirrm lib/R/library/rpart/data
-@dirrm lib/R/library/rpart/R-ex
 @dirrm lib/R/library/rpart/R
 @dirrm lib/R/library/rpart/Meta
 @dirrm lib/R/library/rpart
@@ -9743,12 +1465,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/nnet/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/nnet/po/de
 %%NLS%%@dirrm lib/R/library/nnet/po
-@dirrm lib/R/library/nnet/man
 @dirrm lib/R/library/nnet/libs
-@dirrm lib/R/library/nnet/latex
 @dirrm lib/R/library/nnet/html
 @dirrm lib/R/library/nnet/help
-@dirrm lib/R/library/nnet/R-ex
 @dirrm lib/R/library/nnet/R
 @dirrm lib/R/library/nnet/Meta
 @dirrm lib/R/library/nnet
@@ -9761,22 +1480,16 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/nlme/po/de
 %%NLS%%@dirrm lib/R/library/nlme/po
 @dirrm lib/R/library/nlme/mlbook
-@dirrm lib/R/library/nlme/man
 @dirrm lib/R/library/nlme/libs
-@dirrm lib/R/library/nlme/latex
 @dirrm lib/R/library/nlme/html
 @dirrm lib/R/library/nlme/help
 @dirrm lib/R/library/nlme/data
-@dirrm lib/R/library/nlme/R-ex
 @dirrm lib/R/library/nlme/R
 @dirrm lib/R/library/nlme/Meta
 @dirrm lib/R/library/nlme
-@dirrm lib/R/library/mgcv/man
 @dirrm lib/R/library/mgcv/libs
-@dirrm lib/R/library/mgcv/latex
 @dirrm lib/R/library/mgcv/html
 @dirrm lib/R/library/mgcv/help
-@dirrm lib/R/library/mgcv/R-ex
 @dirrm lib/R/library/mgcv/R
 @dirrm lib/R/library/mgcv/Meta
 @dirrm lib/R/library/mgcv
@@ -9797,12 +1510,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/methods/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/methods/po/de
 %%NLS%%@dirrm lib/R/library/methods/po
-@dirrm lib/R/library/methods/man
 @dirrm lib/R/library/methods/libs
-@dirrm lib/R/library/methods/latex
 @dirrm lib/R/library/methods/html
 @dirrm lib/R/library/methods/help
-@dirrm lib/R/library/methods/R-ex
 @dirrm lib/R/library/methods/R
 @dirrm lib/R/library/methods/Meta
 @dirrm lib/R/library/methods
@@ -9813,14 +1523,11 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/lattice/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/lattice/po/de
 %%NLS%%@dirrm lib/R/library/lattice/po
-@dirrm lib/R/library/lattice/man
 @dirrm lib/R/library/lattice/libs
-@dirrm lib/R/library/lattice/latex
 @dirrm lib/R/library/lattice/html
 @dirrm lib/R/library/lattice/help
 @dirrm lib/R/library/lattice/demo
 @dirrm lib/R/library/lattice/data
-@dirrm lib/R/library/lattice/R-ex
 @dirrm lib/R/library/lattice/R
 @dirrm lib/R/library/lattice/Meta
 @dirrm lib/R/library/lattice
@@ -9843,13 +1550,10 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/grid/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/grid/po/de
 %%NLS%%@dirrm lib/R/library/grid/po
-@dirrm lib/R/library/grid/man
 @dirrm lib/R/library/grid/libs
-@dirrm lib/R/library/grid/latex
 @dirrm lib/R/library/grid/html
 @dirrm lib/R/library/grid/help
 @dirrm lib/R/library/grid/doc
-@dirrm lib/R/library/grid/R-ex
 @dirrm lib/R/library/grid/R
 @dirrm lib/R/library/grid/Meta
 @dirrm lib/R/library/grid
@@ -9870,12 +1574,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/graphics/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/graphics/po/de
 %%NLS%%@dirrm lib/R/library/graphics/po
-@dirrm lib/R/library/graphics/man
-@dirrm lib/R/library/graphics/latex
 @dirrm lib/R/library/graphics/html
 @dirrm lib/R/library/graphics/help
 @dirrm lib/R/library/graphics/demo
-@dirrm lib/R/library/graphics/R-ex
 @dirrm lib/R/library/graphics/R
 @dirrm lib/R/library/graphics/Meta
 @dirrm lib/R/library/graphics
@@ -9898,14 +1599,11 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/grDevices/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/grDevices/po/de
 %%NLS%%@dirrm lib/R/library/grDevices/po
-@dirrm lib/R/library/grDevices/man
 @dirrm lib/R/library/grDevices/libs
-@dirrm lib/R/library/grDevices/latex
 @dirrm lib/R/library/grDevices/html
 @dirrm lib/R/library/grDevices/help
 @dirrm lib/R/library/grDevices/enc
 @dirrm lib/R/library/grDevices/afm
-@dirrm lib/R/library/grDevices/R-ex
 @dirrm lib/R/library/grDevices/R
 @dirrm lib/R/library/grDevices/Meta
 @dirrm lib/R/library/grDevices
@@ -9916,40 +1614,28 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/foreign/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/foreign/po/de
 %%NLS%%@dirrm lib/R/library/foreign/po
-@dirrm lib/R/library/foreign/man
 @dirrm lib/R/library/foreign/libs
-@dirrm lib/R/library/foreign/latex
 @dirrm lib/R/library/foreign/html
 @dirrm lib/R/library/foreign/help
 @dirrm lib/R/library/foreign/files
-@dirrm lib/R/library/foreign/R-ex
 @dirrm lib/R/library/foreign/R
 @dirrm lib/R/library/foreign/Meta
 @dirrm lib/R/library/foreign
-@dirrm lib/R/library/datasets/man
-@dirrm lib/R/library/datasets/latex
 @dirrm lib/R/library/datasets/html
 @dirrm lib/R/library/datasets/help
 @dirrm lib/R/library/datasets/data
-@dirrm lib/R/library/datasets/R-ex
 @dirrm lib/R/library/datasets/R
 @dirrm lib/R/library/datasets/Meta
 @dirrm lib/R/library/datasets
-@dirrm lib/R/library/codetools/man
-@dirrm lib/R/library/codetools/latex
 @dirrm lib/R/library/codetools/html
 @dirrm lib/R/library/codetools/help
-@dirrm lib/R/library/codetools/R-ex
 @dirrm lib/R/library/codetools/R
 @dirrm lib/R/library/codetools/Meta
 @dirrm lib/R/library/codetools
-@dirrm lib/R/library/cluster/man
 @dirrm lib/R/library/cluster/libs
-@dirrm lib/R/library/cluster/latex
 @dirrm lib/R/library/cluster/html
 @dirrm lib/R/library/cluster/help
 @dirrm lib/R/library/cluster/data
-@dirrm lib/R/library/cluster/R-ex
 @dirrm lib/R/library/cluster/R
 @dirrm lib/R/library/cluster/Meta
 @dirrm lib/R/library/cluster
@@ -9960,12 +1646,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/class/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/class/po/de
 %%NLS%%@dirrm lib/R/library/class/po
-@dirrm lib/R/library/class/man
 @dirrm lib/R/library/class/libs
-@dirrm lib/R/library/class/latex
 @dirrm lib/R/library/class/html
 @dirrm lib/R/library/class/help
-@dirrm lib/R/library/class/R-ex
 @dirrm lib/R/library/class/R
 @dirrm lib/R/library/class/Meta
 @dirrm lib/R/library/class
@@ -9975,13 +1658,12 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/boot/po/fr
 %%NLS%%@dirrm lib/R/library/boot/po/en@quot/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/boot/po/en@quot
+%%NLS%%@dirrm lib/R/library/boot/po/de/LC_MESSAGES
+%%NLS%%@dirrm lib/R/library/boot/po/de
 %%NLS%%@dirrm lib/R/library/boot/po
-@dirrm lib/R/library/boot/man
-@dirrm lib/R/library/boot/latex
 @dirrm lib/R/library/boot/html
 @dirrm lib/R/library/boot/help
 @dirrm lib/R/library/boot/data
-@dirrm lib/R/library/boot/R-ex
 @dirrm lib/R/library/boot/R
 @dirrm lib/R/library/boot/Meta
 @dirrm lib/R/library/boot
@@ -10004,12 +1686,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/base/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/base/po/de
 %%NLS%%@dirrm lib/R/library/base/po
-@dirrm lib/R/library/base/man
-@dirrm lib/R/library/base/latex
 @dirrm lib/R/library/base/html
 @dirrm lib/R/library/base/help
 @dirrm lib/R/library/base/demo
-@dirrm lib/R/library/base/R-ex
 @dirrm lib/R/library/base/R
 @dirrm lib/R/library/base/Meta
 @dirrm lib/R/library/base
@@ -10018,9 +1697,7 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/Matrix/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/Matrix/po/de/
 %%NLS%%@dirrm lib/R/library/Matrix/po
-@dirrm lib/R/library/Matrix/man
 @dirrm lib/R/library/Matrix/libs
-@dirrm lib/R/library/Matrix/latex
 @dirrm lib/R/library/Matrix/include
 @dirrm lib/R/library/Matrix/html
 @dirrm lib/R/library/Matrix/help
@@ -10028,7 +1705,6 @@ lib/libR.so.0
 @dirrm lib/R/library/Matrix/doc/UFsparse
 @dirrm lib/R/library/Matrix/doc
 @dirrm lib/R/library/Matrix/data
-@dirrm lib/R/library/Matrix/R-ex
 @dirrm lib/R/library/Matrix/R
 @dirrm lib/R/library/Matrix/Meta
 @dirrm lib/R/library/Matrix
@@ -10040,13 +1716,10 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/MASS/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/MASS/po/de
 %%NLS%%@dirrm lib/R/library/MASS/po
-@dirrm lib/R/library/MASS/man
 @dirrm lib/R/library/MASS/libs
-@dirrm lib/R/library/MASS/latex
 @dirrm lib/R/library/MASS/html
 @dirrm lib/R/library/MASS/help
 @dirrm lib/R/library/MASS/data
-@dirrm lib/R/library/MASS/R-ex
 @dirrm lib/R/library/MASS/R
 @dirrm lib/R/library/MASS/Meta
 @dirrm lib/R/library/MASS
@@ -10055,12 +1728,9 @@ lib/libR.so.0
 %%NLS%%@dirrm lib/R/library/KernSmooth/po/de/LC_MESSAGES
 %%NLS%%@dirrm lib/R/library/KernSmooth/po/de
 %%NLS%%@dirrm lib/R/library/KernSmooth/po
-@dirrm lib/R/library/KernSmooth/man
 @dirrm lib/R/library/KernSmooth/libs
-@dirrm lib/R/library/KernSmooth/latex
 @dirrm lib/R/library/KernSmooth/html
 @dirrm lib/R/library/KernSmooth/help
-@dirrm lib/R/library/KernSmooth/R-ex
 @dirrm lib/R/library/KernSmooth/R
 @dirrm lib/R/library/KernSmooth/Meta
 @dirrm lib/R/library/KernSmooth
@@ -10074,6 +1744,5 @@ lib/libR.so.0
 @dirrm lib/R
 %%PORTDOCS%%%%DVI_MANUAL%%@dirrm %%DOCSDIR%%/manual/images
 @dirrm %%DOCSDIR%%/manual
-@dirrm %%DOCSDIR%%/html/search
 @dirrm %%DOCSDIR%%/html
 @dirrm %%DOCSDIR%%