Update to 2.2.1 and start respecting CFLAGS. Note that this update does not fix

the libtiff vulnerability.

6 files changed, 296 insertions, 332 deletions

diff --git a/science/paraview/Makefile b/science/paraview/Makefile
index 8161c087ba3f..27624f7c638b 100644
--- a/science/paraview/Makefile
+++ b/science/paraview/Makefile
@@ -6,9 +6,9 @@
 #
 
 PORTNAME=	paraview
-PORTVERSION=	2.0.2
+PORTVERSION=	2.2.1
 CATEGORIES=	science graphics
-MASTER_SITES=	http://www.paraview.org/files/v2.0/
+MASTER_SITES=	http://www.paraview.org/files/v2.2/
 
 MAINTAINER=	anholt@FreeBSD.org
 COMMENT=	ParaView is a powerful scientific data visualization application
@@ -27,6 +27,8 @@ do-configure:
 		-DCMAKE_INSTALL_PREFIX:PATH=${PREFIX} \
 		-DCMAKE_C_COMPILER=${CC} \
 		-DCMAKE_CXX_COMPILER=${CXX} \
+		-DCMAKE_C_FLAGS="${CFLAGS} -I${X11BASE}/include" \
+		-DCMAKE_CXX_FLAGS="${CXXFLAGS} -I${X11BASE}/include" \
 		-DPARAVIEW_USE_SYSTEM_HDF5=1
 
 .include <bsd.port.mk>
diff --git a/science/paraview/distinfo b/science/paraview/distinfo
index 782be1798861..b45391060e55 100644
--- a/science/paraview/distinfo
+++ b/science/paraview/distinfo
@@ -1,2 +1,2 @@
-MD5 (paraview-2.0.2.tar.gz) = 479e2a1a389529385cae00901fc168c4
-SIZE (paraview-2.0.2.tar.gz) = 28591275
+MD5 (paraview-2.2.1.tar.gz) = 861e99f11d429b9abaa2d5bf02292300
+SIZE (paraview-2.2.1.tar.gz) = 44277904
diff --git a/science/paraview/files/patch-XdmfDataDesc.cxx b/science/paraview/files/patch-XdmfDataDesc.cxx
index 72a3950da2f2..a1dd7c9affaf 100644
--- a/science/paraview/files/patch-XdmfDataDesc.cxx
+++ b/science/paraview/files/patch-XdmfDataDesc.cxx
@@ -1,15 +1,6 @@
---- Utilities/Xdmf/libsrc/XdmfDataDesc.cxx.orig	Tue Jun  7 16:06:38 2005
-+++ Utilities/Xdmf/libsrc/XdmfDataDesc.cxx	Tue Jun  7 16:06:40 2005
-@@ -313,7 +313,7 @@
- 
- XdmfInt32
- XdmfDataDesc::SelectCoordinates(  XdmfInt64 NumberOfElements, XdmfInt64 *Coordinates ){
--hssize_t  *HCoordinates;
-+hsize_t  *HCoordinates;
- XdmfInt32  status;
- XdmfInt64  i, rank = this->Rank;
- hssize_t  Length = NumberOfElements * rank;
-@@ -326,14 +326,14 @@
+--- Utilities/Xdmf/libsrc/XdmfDataDesc.cxx.orig	Sat Oct 15 13:58:21 2005
++++ Utilities/Xdmf/libsrc/XdmfDataDesc.cxx	Sat Oct 15 13:58:36 2005
+@@ -334,7 +334,7 @@
  
  this->SelectionType = XDMF_COORDINATES;
  XdmfDebug(" Selecting " << (int)NElements << " elements" );
@@ -18,11 +9,3 @@
  for( i = 0 ; i < Length ; i++ ){
    HCoordinates[i] = Coordinates[i];
    }
- status = H5Sselect_elements( this->DataSpace,
-         H5S_SELECT_SET,
-          NElements,
--         ( const hssize_t **)HCoordinates);
-+         ( const hsize_t **)HCoordinates);
- if( status < 0 ) {
-   return( XDMF_FAIL );
- }
diff --git a/science/paraview/files/patch-XdmfDataDesc.h b/science/paraview/files/patch-XdmfDataDesc.h
deleted file mode 100644
index fc5d48fca0a7..000000000000
--- a/science/paraview/files/patch-XdmfDataDesc.h
+++ /dev/null
@@ -1,11 +0,0 @@
---- Utilities/Xdmf/libsrc/XdmfDataDesc.h.orig	Tue Jun  7 16:08:31 2005
-+++ Utilities/Xdmf/libsrc/XdmfDataDesc.h	Tue Jun  7 16:08:31 2005
-@@ -208,7 +208,7 @@
-   XdmfInt32  Rank;
-   XdmfInt64  NextOffset;
-   XdmfInt64  Dimension[XDMF_MAX_DIMENSION];
--  hssize_t  Start[XDMF_MAX_DIMENSION];
-+  hsize_t  Start[XDMF_MAX_DIMENSION];
-   hsize_t    Stride[XDMF_MAX_DIMENSION];
-   hsize_t    Count[XDMF_MAX_DIMENSION];
- 
diff --git a/science/paraview/files/patch-vtkHDF5RawImageReader.cxx b/science/paraview/files/patch-vtkHDF5RawImageReader.cxx
deleted file mode 100644
index 033c4cfcbc55..000000000000
--- a/science/paraview/files/patch-vtkHDF5RawImageReader.cxx
+++ /dev/null
@@ -1,20 +0,0 @@
---- Servers/Filters/vtkHDF5RawImageReader.cxx.orig	Mon Sep 13 10:47:52 2004
-+++ Servers/Filters/vtkHDF5RawImageReader.cxx	Wed Jun  8 17:34:58 2005
-@@ -294,7 +294,7 @@
-   if(!(this->UpdateExtentIsWholeExtent() && (this->Stride[0] == 1) &&
-       (this->Stride[1] == 1) && (this->Stride[2] == 1)))
-     {
--    hssize_t h_start[3]  = {0,0,0};
-+    hsize_t  h_start[3]  = {0,0,0};
-     hsize_t  h_count[3]  = {0,0,0};
-     hsize_t  h_stride[3] = {0,0,0};
-     hsize_t  h_total[3]  = {0,0,0};
-@@ -323,7 +323,7 @@
-       result = 0;
-       }
-     hid_t memspace = H5Screate_simple(this->Rank, h_count, 0);
--    hssize_t moffset[3] = {0, 0, 0};
-+    hsize_t moffset[3] = {0, 0, 0};
-     if(H5Sselect_hyperslab(memspace, H5S_SELECT_SET,
-                               moffset, 0, h_count, 0) < 0)
-       {
diff --git a/science/paraview/pkg-plist b/science/paraview/pkg-plist
index 7db61f175069..afaff33d0139 100644
--- a/science/paraview/pkg-plist
+++ b/science/paraview/pkg-plist
@@ -4,280 +4,290 @@ bin/pvclient
 bin/pvdataserver
 bin/pvrenderserver
 bin/pvserver
-lib/paraview-2.0/TclTk/lib/tcl8.4/ascii.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/auto.tcl
-lib/paraview-2.0/TclTk/lib/tcl8.4/big5.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1250.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1251.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1252.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1253.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1254.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1255.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1256.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1257.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp1258.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp437.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp737.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp775.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp850.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp852.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp855.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp857.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp860.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp861.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp862.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp863.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp864.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp865.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp866.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp869.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp874.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp932.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp936.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp949.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/cp950.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/dingbats.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/ebcdic.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/euc-cn.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/euc-jp.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/euc-kr.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/gb12345.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/gb1988.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/gb2312-raw.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/gb2312.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/history.tcl
-lib/paraview-2.0/TclTk/lib/tcl8.4/init.tcl
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso2022-jp.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso2022-kr.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso2022.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-1.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-10.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-13.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-14.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-15.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-16.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-2.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-3.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-4.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-5.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-6.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-7.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-8.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/iso8859-9.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/jis0201.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/jis0208.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/jis0212.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/koi8-r.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/koi8-u.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/ksc5601.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/ldAout.tcl
-lib/paraview-2.0/TclTk/lib/tcl8.4/macCentEuro.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macCroatian.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macCyrillic.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macDingbats.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macGreek.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macIceland.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macJapan.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macRoman.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/macRomania.enc
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-lib/paraview-2.0/TclTk/lib/tcl8.4/macUkraine.enc
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-lib/paraview-2.0/TclTk/lib/tcl8.4/parray.tcl
-lib/paraview-2.0/TclTk/lib/tcl8.4/safe.tcl
-lib/paraview-2.0/TclTk/lib/tcl8.4/shiftjis.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/symbol.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/tclIndex
-lib/paraview-2.0/TclTk/lib/tcl8.4/tis-620.enc
-lib/paraview-2.0/TclTk/lib/tcl8.4/word.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/bgerror.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/button.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/choosedir.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/clrpick.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/comdlg.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/console.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/dialog.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/entry.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/focus.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/listbox.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/menu.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/mkpsenc.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/msgbox.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/obsolete.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/optMenu.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/palette.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/panedwindow.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/safetk.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/scale.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/scrlbar.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/spinbox.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/tclIndex
-lib/paraview-2.0/TclTk/lib/tk8.4/tearoff.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/text.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/tk.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/tkfbox.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/unsupported.tcl
-lib/paraview-2.0/TclTk/lib/tk8.4/xmfbox.tcl
-share/paraview-2.0/Data/CMakeLists.txt
-share/paraview-2.0/Data/Package.pvsm
-share/paraview-2.0/Data/Package.xml
-share/paraview-2.0/Data/RectGrid2.vtk
-share/paraview-2.0/Data/Test1.h5
-share/paraview-2.0/Data/Test1.xmf
-share/paraview-2.0/Data/blow data.vtk
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-share/paraview-2.0/Data/box.ex2
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-share/paraview-2.0/Data/chombo3d/chombo3d_3.vti
-share/paraview-2.0/Data/chombo3d/chombo3d_4.vti
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-share/paraview-2.0/Data/chombo3d/chombo3d_6.vti
-share/paraview-2.0/Data/chombo3d/chombo3d_7.vti
-share/paraview-2.0/Data/chombo3d/chombo3d_8.vti
-share/paraview-2.0/Data/chombo3d/chombo3d_9.vti
-share/paraview-2.0/Data/combq.bin
-share/paraview-2.0/Data/combxyz.bin
-share/paraview-2.0/Data/cth.vtr
-share/paraview-2.0/Data/elements.ECsca_i
-share/paraview-2.0/Data/elements.ECsca_r
-share/paraview-2.0/Data/elements.ECvec_i
-share/paraview-2.0/Data/elements.ECvec_r
-share/paraview-2.0/Data/elements.Esca
-share/paraview-2.0/Data/elements.Eten
-share/paraview-2.0/Data/elements.Evec
-share/paraview-2.0/Data/elements.NCsca_i
-share/paraview-2.0/Data/elements.NCsca_r
-share/paraview-2.0/Data/elements.NCvec_i
-share/paraview-2.0/Data/elements.NCvec_r
-share/paraview-2.0/Data/elements.Nsca
-share/paraview-2.0/Data/elements.Nten
-share/paraview-2.0/Data/elements.Nvec
-share/paraview-2.0/Data/elements.case
-share/paraview-2.0/Data/elements.geo
-share/paraview-2.0/Data/headsq/quarter.1
-share/paraview-2.0/Data/headsq/quarter.10
-share/paraview-2.0/Data/headsq/quarter.11
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+share/paraview-2.2/Data/vox8_ascii.vtk
+share/paraview-2.2/Data/vox8_bin.vtk
+share/paraview-2.2/Demos/Demo1.pvs
+share/paraview-2.2/Demos/blow.vtk
+share/paraview-2.2/Demos/combbin.q
+share/paraview-2.2/Demos/combbin.xyz
+share/paraview-2.2/Demos/postbin.q
+share/paraview-2.2/Demos/postbin.xyz
+share/paraview-2.2/Demos/quadric.vtk
+@dirrm share/paraview-2.2/Demos
+@dirrm share/paraview-2.2/Data/headsq
+@dirrm share/paraview-2.2/Data/chombo3d
+@dirrm share/paraview-2.2/Data
+@dirrm share/paraview-2.2
+@dirrm lib/paraview-2.2/TclTk/lib/tk8.4
+@dirrm lib/paraview-2.2/TclTk/lib/tcl8.4
+@dirrm lib/paraview-2.2/TclTk/lib
+@dirrm lib/paraview-2.2/TclTk
+@dirrm lib/paraview-2.2