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-rw-r--r--biology/nab/pkg-plist281
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@@ -0,0 +1,281 @@
+bin/nab
+bin/nab2c
+bin/teLeap
+share/doc/nab/NAB.pdf
+share/nab/lib/libnab.a
+share/nab/include/nabcode.h
+share/nab/include/nab.h
+share/nab/include/defreal.h
+share/nab/include/nabtypes.h
+share/nab/examples/program_1.nab
+share/nab/examples/program_2.nab
+share/nab/examples/program_3.nab
+share/nab/examples/program_4.nab
+share/nab/examples/program_5.nab
+share/nab/examples/program_6.nab
+share/nab/examples/program_7.nab
+share/nab/examples/program_7.nab.orig
+share/nab/examples/README
+share/nab/examples/program_9.nab
+share/nab/examples/program_10.nab
+share/nab/examples/program_11.nab
+share/nab/examples/program_12.nab
+share/nab/examples/program_13.nab
+share/nab/examples/program_14.nab
+share/nab/examples/program_8.nab
+share/nab/examples/test.pdb
+share/nab/examples/ADE.pdb
+share/nab/examples/Makefile
+share/nab/examples/gcg10.pdb
+share/nab/examples/rna_pseudoknot.pdb
+share/nab/examples/THY.pdb
+share/nab/examples/program_5.gcg.in
+share/nab/examples/getbase.nab
+share/nab/examples/program_4.ref
+share/nab/examples/acgtacgt.pdb
+share/nab/examples/program_5.tat.in
+share/nab/examples/program_2.ref
+share/nab/examples/program_5.cgc.in
+share/nab/examples/program_5.ata.in
+share/nab/examples/test.sup.pdb
+share/nab/examples/gcg10.pdb.save
+share/nab/dgdb/bdna.basepair.db
+share/nab/dgdb/bdna.nucleotide.db
+share/nab/dgdb/bdna.stack.db
+share/nab/dgdb/trna.stack.db
+share/nab/dgdb/arna.basepair.db
+share/nab/dgdb/trna.basepair.db
+share/nab/dgdb/zdna.nucleotide.db
+share/nab/dgdb/adna.nucleotide.db
+share/nab/dgdb/adna.basepair.db
+share/nab/dgdb/adna.stack.db
+share/nab/dgdb/zdna.basepair.db
+share/nab/dgdb/zdna.stack.db
+share/nab/dgdb/trna.nucleotide.db
+share/nab/dgdb/dna.basepair.db
+share/nab/dgdb/arna.nucleotide.db
+share/nab/dgdb/rna.basepair.db
+share/nab/dgdb/arna.stack.db
+share/nab/reslib/bdna.std/bdna.std.bnd
+share/nab/reslib/bdna.std/bdna.std.chi
+share/nab/reslib/bdna.std/bdna.std.pdb
+share/nab/reslib/bdna.std/dna.qr
+share/nab/reslib/bounds.db
+share/nab/reslib/protein.opls/protein.opls.bnd
+share/nab/reslib/protein.opls/protein.opls.chi
+share/nab/reslib/protein.opls/protein.opls.pdb
+share/nab/reslib/protein.opls/protein.opls.qr
+share/nab/reslib/arna.std/arna.std.bnd
+share/nab/reslib/arna.std/arna.std.pdb
+share/nab/reslib/adna.std.rlb
+share/nab/reslib/axes/Axes.bnd
+share/nab/reslib/axes/XYZ.axes
+share/nab/reslib/rna.amber94/rna.amber94.3.bnd
+share/nab/reslib/rna.amber94/rna.amber94.3.pdb
+share/nab/reslib/rna.amber94/rna.amber94.5.qr
+share/nab/reslib/rna.amber94/rna.amber94.5.bnd
+share/nab/reslib/rna.amber94/rna.amber94.5.pdb
+share/nab/reslib/rna.amber94/rna.amber94.qr
+share/nab/reslib/rna.amber94/rna.amber94.bnd
+share/nab/reslib/rna.amber94/rna.amber94.chi
+share/nab/reslib/rna.amber94/rna.amber94.pdb
+share/nab/reslib/rna.amber94/rna.amber94.3.qr
+share/nab/reslib/rna.amber94/rna.amber94_nmr.3.qr
+share/nab/reslib/rna.amber94/rna.amber94_nmr.qr
+share/nab/reslib/rna.amber94/rna.amber94_nmr.5.qr
+share/nab/reslib/arna.std.rlb
+share/nab/reslib/protein.amber94/protein.amber94.C.bnd
+share/nab/reslib/protein.amber94/protein.amber94.C.pdb
+share/nab/reslib/protein.amber94/protein.amber94.C.qr
+share/nab/reslib/protein.amber94/protein.amber94.N.bnd
+share/nab/reslib/protein.amber94/protein.amber94.N.pdb
+share/nab/reslib/protein.amber94/protein.amber94.N.qr
+share/nab/reslib/protein.amber94/protein.amber94.NC.chi
+share/nab/reslib/protein.amber94/protein.amber94.bnd
+share/nab/reslib/protein.amber94/protein.amber94.chi
+share/nab/reslib/protein.amber94/protein.amber94.pdb
+share/nab/reslib/protein.amber94/protein.amber94.qr
+share/nab/reslib/protein.amber94/protein.amber94_nmr.qr
+share/nab/reslib/bdna.std.rlb
+share/nab/reslib/dna.amber94_nmr.5.rlb
+share/nab/reslib/dna.amber94/dna.amber94.3.bnd
+share/nab/reslib/dna.amber94/dna.amber94.3.pdb
+share/nab/reslib/dna.amber94/dna.amber94.3.qr
+share/nab/reslib/dna.amber94/dna.amber94.5.bnd
+share/nab/reslib/dna.amber94/dna.amber94.5.pdb
+share/nab/reslib/dna.amber94/dna.amber94.5.qr
+share/nab/reslib/dna.amber94/dna.amber94.bnd
+share/nab/reslib/dna.amber94/dna.amber94.chi
+share/nab/reslib/dna.amber94/dna.amber94.pdb
+share/nab/reslib/dna.amber94/dna.amber94.qr
+share/nab/reslib/dna.amber94/dna.amber94_nmr.3.qr
+share/nab/reslib/dna.amber94/dna.amber94_nmr.5.qr
+share/nab/reslib/dna.amber94/dna.amber94_nmr.qr
+share/nab/reslib/dna.amber94/ade.pdb
+share/nab/reslib/dna.amber94/dna.amber94.35.chi
+share/nab/reslib/adna.std/adna.std.bnd
+share/nab/reslib/adna.std/adna.std.pdb
+share/nab/reslib/dna.amber94.3.rlb
+share/nab/reslib/dna.amber94.5.rlb
+share/nab/reslib/dna.amber94_nmr.rlb
+share/nab/reslib/dna.amber94.rlb
+share/nab/reslib/dna.amber94_nmr.3.rlb
+share/nab/reslib/rna.amber94.rlb
+share/nab/reslib/leap/all_amino94.lib
+share/nab/reslib/leap/all_aminoct94.lib
+share/nab/reslib/leap/all_aminont94.lib
+share/nab/reslib/leap/all_nucleic94.lib
+share/nab/reslib/leap/ions94.lib
+share/nab/reslib/leap/leaprc.std
+share/nab/reslib/leap/parm91X.dat
+share/nab/reslib/leap/parm94.dat
+share/nab/reslib/leap/leaprc.nmr
+share/nab/reslib/leap/na.amberua.prepin
+share/nab/reslib/leap/ions91.lib
+share/nab/reslib/leap/water.lib
+share/nab/reslib/leap/protein.opls.lib
+share/nab/reslib/leap/opls_parm.dat
+share/nab/reslib/leap/leaprc.dna.amberua
+share/nab/reslib/leap/rna.amberua.lib
+share/nab/reslib/leap/dna.amberua.lib
+share/nab/reslib/leap/parm91X.ua.dat
+share/nab/reslib/leap/pro-dna91.nmr.db4
+share/nab/reslib/leap/Notes
+share/nab/reslib/leap/0README
+share/nab/reslib/leap/parm91.lib
+share/nab/reslib/leap/pro-dna91.nmr.lib
+share/nab/reslib/leap/protein.amberua.C.prepin
+share/nab/reslib/leap/protein.amberua.N.prepin
+share/nab/reslib/leap/protein.amberua.prepin
+share/nab/reslib/leap/pro-dna91.nmr.prepin
+share/nab/reslib/leap/leaprc.rna.amberua
+share/nab/reslib/leap/dna.amberua.redch.lib
+share/nab/reslib/leap/leaprc.dna.amberua.redch
+share/nab/reslib/leap/leaprc.rna
+share/nab/reslib/leap/protein.amberua.lib
+share/nab/reslib/leap/leaprc.protein.amberua
+share/nab/reslib/leap/leap.log
+share/nab/reslib/leap/all_amino91.lib
+share/nab/reslib/leap/all_aminoct91.lib
+share/nab/reslib/leap/all_aminont91.lib
+share/nab/reslib/leap/all_nucleic91.lib
+share/nab/reslib/protein.amber94.C.rlb
+share/nab/reslib/protein.amber94.N.rlb
+share/nab/reslib/protein.amber94.rlb
+share/nab/reslib/protein.opls.rlb
+share/nab/reslib/axes.rlb
+share/nab/reslib/hetatm.amber94/hetatm.amber94.qr
+share/nab/reslib/hetatm.amber94/hetatm.amber94.pdb
+share/nab/reslib/hetatm.amber94/hetatm.amber94.chi
+share/nab/reslib/hetatm.amber94/hetatm.amber94.bnd
+share/nab/reslib/dna.amberua/dna.amberua.bnd
+share/nab/reslib/dna.amberua/dna.amberua.pdb
+share/nab/reslib/dna.amberua/dna.amberua.qr
+share/nab/reslib/dna.amberua/dna.amberua.5.bnd
+share/nab/reslib/dna.amberua/dna.amberua.5.pdb
+share/nab/reslib/dna.amberua/dna.amberua.3.qr
+share/nab/reslib/dna.amberua/dna.amberua.3.bnd
+share/nab/reslib/dna.amberua/dna.amberua.3.pdb
+share/nab/reslib/dna.amberua/dna.amberua.chi
+share/nab/reslib/dna.amberua/dna.amberua.5.qr
+share/nab/reslib/hetatm.amber94.rlb
+share/nab/reslib/dna.amberua.rlb
+share/nab/reslib/rna.amberua/rna.amberua.3.bnd
+share/nab/reslib/rna.amberua/rna.amberua.3.pdb
+share/nab/reslib/rna.amberua/rna.amberua.5.qr
+share/nab/reslib/rna.amberua/rna.amberua.5.bnd
+share/nab/reslib/rna.amberua/rna.amberua.5.pdb
+share/nab/reslib/rna.amberua/rna.amberua.qr
+share/nab/reslib/rna.amberua/rna.amberua.bnd
+share/nab/reslib/rna.amberua/rna.amberua.pdb
+share/nab/reslib/rna.amberua/rna.amberua.chi
+share/nab/reslib/rna.amberua/rna.amberua.3.qr
+share/nab/reslib/pro-dna.nmr/pro-dna.nmr.input
+share/nab/reslib/pro-dna.nmr/pro-dna.nmr.off
+share/nab/reslib/pro-dna.nmr/pro-dna.nmr.star
+share/nab/reslib/dna.amberua.5.rlb
+share/nab/reslib/dna.amberua.3.rlb
+share/nab/reslib/rna.amberua.rlb
+share/nab/reslib/rna.amberua.3.rlb
+share/nab/reslib/rna.amberua.5.rlb
+share/nab/reslib/rna.amber94.5.rlb
+share/nab/reslib/rna.amber94.3.rlb
+share/nab/reslib/rna.amber94_nmr.3.rlb
+share/nab/reslib/ala.off
+share/nab/reslib/rna.amber94_nmr.5.rlb
+share/nab/reslib/rna.amber94_nmr.rlb
+share/nab/reslib/protein.amber94_nmr.rlb
+share/nab/reslib/leap.log
+share/nab/reslib/off2star
+share/nab/reslib/pep1.off
+share/nab/reslib/cdd.mol2
+share/nab/reslib/syblCDD.lib
+share/nab/reslib/parm94.star
+share/nab/reslib/charlie.star.note
+share/nab/reslib/conf.lib
+share/nab/reslib/dna3/dna3.qr
+share/nab/reslib/dna3/dna3.bnd
+share/nab/reslib/dna3/dna3.chi
+share/nab/reslib/dna3/dna3.pdb
+share/nab/reslib/dna3.rlb
+share/nab/test/duplex.in
+share/nab/test/5pti.obs
+share/nab/test/5pti.pdb
+share/nab/test/prmtop
+share/nab/test/2.pdb
+share/nab/test/d01.lin.check
+share/nab/test/ltest.nab
+share/nab/test/d01.pdb.check
+share/nab/test/dna.circle.nab
+share/nab/test/duplex.nab
+share/nab/test/hash.in
+share/nab/test/hash.nab
+share/nab/test/hash.out.check
+share/nab/test/ltest.out.check
+share/nab/test/get_pep_info.nab
+share/nab/test/get_ring_info.nab
+share/nab/test/get_sugar_info.nab
+share/nab/test/getresid_from_pdb.nab
+share/nab/test/ico.sym
+share/nab/test/read_obs_shifts.nab
+share/nab/test/sbcoil.nab
+share/nab/test/shifts.nab
+share/nab/test/swap_shifts.nab
+share/nab/test/write_sander_inp.nab
+share/nab/test/shifts.h
+share/nab/test/reflexive.nab
+share/nab/test/reflexive.out
+share/nab/test/dg_gyrate.nab
+share/nab/test/5pti.shifts.check
+share/nab/test/ico.sym.out.check
+share/nab/test/tbv.com.pdb
+share/nab/test/dg_gyrate.out.check
+share/nab/test/tbv.60.com.pdb.check
+share/nab/test/gbrna.prmtop
+share/nab/test/gbrna.out.check
+share/nab/test/gbrna.pdb
+share/nab/test/gbrna.nab
+share/nab/test/pointplane.nab
+share/nab/coords
+@dirrm share/nab/reslib/pro-dna.nmr
+@dirrm share/nab/reslib/bdna.std
+@dirrm share/nab/reslib/protein.opls
+@dirrm share/nab/reslib/arna.std
+@dirrm share/nab/reslib/axes
+@dirrm share/nab/reslib/rna.amber94
+@dirrm share/nab/reslib/protein.amber94
+@dirrm share/nab/reslib/dna.amber94
+@dirrm share/nab/reslib/adna.std
+@dirrm share/nab/reslib/hetatm.amber94
+@dirrm share/nab/reslib/dna.amberua
+@dirrm share/nab/reslib/rna.amberua
+@dirrm share/nab/reslib/dna3
+@dirrm share/nab/reslib/leap
+@dirrm share/nab/reslib
+@dirrm share/nab/test
+@dirrm share/nab/examples
+@dirrm share/nab/lib
+@dirrm share/nab/include
+@dirrm share/nab/dgdb
+@dirrm share/nab
+@dirrm share/doc/nab