diff options
Diffstat (limited to 'biology/ssaha/files/patch-SequenceReader.cpp')
| -rw-r--r-- | biology/ssaha/files/patch-SequenceReader.cpp | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/biology/ssaha/files/patch-SequenceReader.cpp b/biology/ssaha/files/patch-SequenceReader.cpp new file mode 100644 index 000000000000..356c6e8363d9 --- /dev/null +++ b/biology/ssaha/files/patch-SequenceReader.cpp @@ -0,0 +1,20 @@ +--- ./SequenceReader/SequenceReader.cpp.orig 2004-03-01 13:51:29.000000000 -0300 ++++ ./SequenceReader/SequenceReader.cpp 2008-06-12 15:39:31.000000000 -0300 +@@ -179,7 +179,7 @@ + + for ( ; i != reverseBuffer_.end() ; i++, j-- ) + { +- *i= reverseChar[ *j ]; ++ *i= reverseChar[ (int) *j ]; + // cout << "char: " << (int)*j << *j << " - " << (int)*i << *i << endl; + } + +@@ -356,7 +356,7 @@ + throw SSAHAException + ("Requested seq start exceeds requested seq end in SourceReaderIndex::extractSource"); + } // ~if +- else if (seqEnd>lastSourceSeq_.size() ) ++ else if (seqEnd>(int)lastSourceSeq_.size() ) + { + cout << seqEnd << " " << lastSourceSeq_.size() << endl; + throw SSAHAException |