diff options
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/Makefile | 1 | ||||
| -rw-r--r-- | biology/linux-foldingathome/Makefile | 43 | ||||
| -rw-r--r-- | biology/linux-foldingathome/distinfo | 3 | ||||
| -rw-r--r-- | biology/linux-foldingathome/pkg-descr | 9 | ||||
| -rw-r--r-- | biology/linux-foldingathome/scripts/FoldingAtHome | 5 |
5 files changed, 61 insertions, 0 deletions
diff --git a/biology/Makefile b/biology/Makefile index 9dfadc1fbf3d..69f946bebccb 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -38,6 +38,7 @@ SUBDIR += lagan SUBDIR += lamarc SUBDIR += libgenome + SUBDIR += linux-foldingathome SUBDIR += lsysexp SUBDIR += mafft SUBDIR += migrate diff --git a/biology/linux-foldingathome/Makefile b/biology/linux-foldingathome/Makefile new file mode 100644 index 000000000000..ed8878efba18 --- /dev/null +++ b/biology/linux-foldingathome/Makefile @@ -0,0 +1,43 @@ +# Ports collection makefile for: foldingathome +# Date created: 2/8/2006 +# Whom: Yonatan <onatan@gmail.com> +# +# $FreeBSD$ +# + +PORTNAME= foldingathome +PORTVERSION= 5.02 +CATEGORIES= biology +MASTER_SITES= http://www.stanford.edu/group/pandegroup/release/ +PKGNAMEPREFIX= linux- +DISTNAME= FAH${PORTVERSION:S/.//}-Linux +EXTRACT_SUFX= .exe + +MAINTAINER= onatan@gmail.com +COMMENT= Distributed client for Protein Folding + +USE_LINUX= yes +ONLY_FOR_ARCHS= i386 amd64 +REINPLACE_ARGS= +PLIST_FILES= share/${PORTNAME}/${DISTNAME}${EXTRACT_SUFX} \ + bin/FoldingAtHome +PLIST_DIRS= share/${PORTNAME} + +do-extract: + ${MKDIR} ${WRKSRC} + ${CP} ${DISTDIR}/${DISTNAME}${EXTRACT_SUFX} ${WRKSRC} + +do-build: + ${BRANDELF} -t Linux ${WRKSRC}/${DISTNAME}${EXTRACT_SUFX} + ${CHMOD} 755 ${WRKSRC}/${DISTNAME}${EXTRACT_SUFX} + +do-install: + ${MKDIR} ${PREFIX}/bin + ${REINPLACE_CMD} -e "s|DATADIR|${DATADIR}|" ${SCRIPTDIR}/FoldingAtHome \ + | ${REINPLACE_CMD} -e "s|BINNAME|${DISTNAME}${EXTRACT_SUFX}|" \ + > ${PREFIX}/bin/FoldingAtHome + ${CHMOD} 755 ${PREFIX}/bin/FoldingAtHome + ${MKDIR} ${DATADIR} + ${CP} ${WRKSRC}/${DISTNAME}${EXTRACT_SUFX} ${DATADIR}/ + +.include <bsd.port.mk> diff --git a/biology/linux-foldingathome/distinfo b/biology/linux-foldingathome/distinfo new file mode 100644 index 000000000000..2cfac333d0ef --- /dev/null +++ b/biology/linux-foldingathome/distinfo @@ -0,0 +1,3 @@ +MD5 (FAH502-Linux.exe) = 4855e808fb94e6d2c5fde345aea0cdc3 +SHA256 (FAH502-Linux.exe) = 02e2d3665a6e8f8fc89c7751b8faadff6885d34860643bdd4107d92825754d33 +SIZE (FAH502-Linux.exe) = 249236 diff --git a/biology/linux-foldingathome/pkg-descr b/biology/linux-foldingathome/pkg-descr new file mode 100644 index 000000000000..b9b85bf68f8c --- /dev/null +++ b/biology/linux-foldingathome/pkg-descr @@ -0,0 +1,9 @@ +Folding@Home is a distributed computing project -- people from through out the +world download and run software to band together to make one of the largest +supercomputers in the world. Every computer makes the project closer to our +goals. +Folding@Home uses novel computational methods coupled to distributed computing, +to simulate problems thousands to millions of times more challenging than +previously achieved. + +WWW: http://folding.standford.edu diff --git a/biology/linux-foldingathome/scripts/FoldingAtHome b/biology/linux-foldingathome/scripts/FoldingAtHome new file mode 100644 index 000000000000..3bd56fcb9f39 --- /dev/null +++ b/biology/linux-foldingathome/scripts/FoldingAtHome @@ -0,0 +1,5 @@ +#!/bin/sh +CURDIR=`pwd` +cd DATADIR +nice -n 20 ./BINNAME -freeBSD +cd $CURDIR |