| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | biology/ad2vcf: Remove comment used to silence portlint | Jason W. Bacon | 2021-06-11 | 1 | -2/+0 |
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| * | biology/ad2vcf: Update to 0.1.3 | Jason W. Bacon | 2021-06-11 | 3 | -9/+9 |
| | | | | | | | Updates for new biolibc API Changes: https://github.com/auerlab/ad2vcf/releases | ||||
| * | One more small cleanup, forgotten yesterday. | Mathieu Arnold | 2021-04-07 | 1 | -1/+0 |
| | | | | | Reported by: lwhsu | ||||
| * | Remove # $FreeBSD$ from Makefiles. | Mathieu Arnold | 2021-04-06 | 1 | -1/+0 |
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| * | biology/ad2vcf: Add allelic depth info from a SAM stream to a VCF file | Jason W. Bacon | 2021-03-23 | 3 | -0/+35 |
| ad2vdf extracts allelic depth info from a SAM stream and adds it to a corresponding single-sample VCF file. SAM input is read via stdin and the VCF input file is taken as a command-line argument. This allows expensive BAM/CRAM decoding to be performed in parallel by a separate samtools process. Notes: svn path=/head/; revision=569033 | |||||
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