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* - Swap back from net/openmpi3 to net/openmpiDanilo Egea Gondolfo2020-04-211-3/+3
| | | | Notes: svn path=/head/; revision=532428
* - Move OpenMPI support to net/openmpi3. OpenMPI 1 and 2 were deprecated.Danilo Egea Gondolfo2020-04-151-2/+3
| | | | | | | Approved by: maintainer (e-mail) Notes: svn path=/head/; revision=531784
* biology/mrbayes: Update to version 3.2.7Joseph Mingrone2020-02-296-39/+60
| | | | | | | | PR: 243237 Submitted by: mzaki@e-mail.ne.jp (maintainer, with modifications) Notes: svn path=/head/; revision=527483
* Mark a few ports BROKEN, unfetchableAntoine Brodin2019-11-061-0/+2
| | | | Notes: svn path=/head/; revision=516880
* Update devel/readline to 8.0Sunpoet Po-Chuan Hsieh2019-04-091-1/+1
| | | | | | | | | | | - Bump PORTREVISION of dependent ports for shlib change Changes: https://tiswww.case.edu/php/chet/readline/CHANGES PR: 236156 Exp-run by: antoine Notes: svn path=/head/; revision=498476
* Update devel/readline to 7.0 patch 3Sunpoet Po-Chuan Hsieh2017-06-271-1/+1
| | | | | | | | | | | | | | - Bump PORTREVISION for shlib change Changes: https://cnswww.cns.cwru.edu/php/chet/readline/CHANGES https://lists.gnu.org/archive/html/bug-bash/2016-09/msg00107.html https://lists.gnu.org/archive/html/bug-readline/2017-01/msg00002.html Differential Revision: https://reviews.freebsd.org/D11172 PR: 219947 Exp-run by: antoine Notes: svn path=/head/; revision=444463
* Fix build on -current by un-clobbering LDFLAGS. Also, don'tAdam Weinberger2014-08-152-4/+13
| | | | | | | mute installation commands. Notes: svn path=/head/; revision=364996
* Support stageBaptiste Daroussin2013-12-101-8/+5
| | | | | | | | USE_GMAKE -> USES=gmake use USES=readline:port Notes: svn path=/head/; revision=336072
* Add NO_STAGE all over the place in preparation for the staging support (cat: ↵Baptiste Daroussin2013-09-201-5/+2
| | | | | | | biology) Notes: svn path=/head/; revision=327709
* - Get Rid MD5 supportMartin Wilke2011-03-191-1/+0
| | | | Notes: svn path=/head/; revision=271305
* Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently fromIon-Mihai Tetcu2009-05-121-1/+2
| | | | | | | | | | 5 to 6. Forgotten by: araujo@ Reported by: QAT Notes: svn path=/head/; revision=233764
* - Update maintainer's email addressPav Lucistnik2008-05-171-1/+1
| | | | | | | Submitted by: Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> (maintainer) Notes: svn path=/head/; revision=213206
* MrBayes is a program for the Bayesian estimation of phylogeny.Martin Wilke2007-12-154-0/+59
Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a tree conditioned on the observations. The conditioning is accomplished using Bayes's theorem. The posterior probability distribution of trees is impossible to calculate analytically; instead, MrBayes uses a simulation technique called Markov chain Monte Carlo (or MCMC) to approximate the posterior probabilities of trees. WWW: http://mrbayes.csit.fsu.edu/ PR: ports/118542 Submitted by: mzaki at biol.s.u-tokyo.ac.jp Notes: svn path=/head/; revision=203737
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