aboutsummaryrefslogtreecommitdiff
path: root/biology/seaview
Commit message (Collapse)AuthorAgeFilesLines
* biology/seaview: Update version 5.0.4=>5.0.5Muhammad Moinur Rahman2021-12-063-77/+4
| | | | Relnotes: http://doua.prabi.fr/software/seaview_data/CHANGES
* biology/seaview: in preparation to FLTK update, unbreak the portAlexey Dokuchaev2021-08-142-3/+74
| | | | | | Ensure there is only one variable definition per each object, as the C (and C++) standards mandated for years and is now enforced by modern toolchains.
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
|
* Mark BROKEN in 13/14 (via latest llvm update).Mark Linimon2021-02-171-0/+3
| | | | Notes: svn path=/head/; revision=565807
* biology/seaview: Update version 5.0.3=>5.0.4Muhammad Moinur Rahman2020-06-222-4/+4
| | | | | | | Relnotes: http://doua.prabi.fr/software/seaview_data/CHANGES Notes: svn path=/head/; revision=539893
* biology/seaview: Update version 5.0.2=>5.0.3Muhammad Moinur Rahman2020-06-142-4/+4
| | | | | | | Relnotes: http://doua.prabi.fr/software/seaview_data/CHANGES Notes: svn path=/head/; revision=538720
* biology/seaview: Update version 5.0=>5.0.2Muhammad Moinur Rahman2020-03-222-4/+4
| | | | | | | Relnotes: http://doua.prabi.fr/software/seaview Notes: svn path=/head/; revision=528926
* biology/seaview: Update version 4.7=>5.0Muhammad Moinur Rahman2020-02-055-69/+4
| | | | | | | Relnotes:http://doua.prabi.fr/software/seaview Notes: svn path=/head/; revision=525314
* Add USES=xorg USES=gl, ports categories bNiclas Zeising2019-11-041-1/+1
| | | | | | | | Add USES=xorg, USES=gl and in a few cases USES=gnome to ports in categories starting with 'b'. Notes: svn path=/head/; revision=516742
* biology/seaview: Fix build with Clang 6Tobias Kortkamp2018-09-083-0/+65
| | | | | | | | | | | | | | | seaview.cxx:3352:24: error: invalid suffix on literal; C++11 requires a space between literal and identifier [-Wreserved-user-defined-literal] strcat(suggested, "."PDF_OR_PS_EXT); ^ http://beefy12.nyi.freebsd.org/data/head-amd64-default/p479076_s338486/logs/errors/seaview-4.7,1.log PR: 230881 Submitted by: tobik Approved by: bofh (maintainer timeout, 2 weeks) Notes: svn path=/head/; revision=479235
* biology/seaview: Updatye version 4.6.5=>4.7Muhammad Moinur Rahman2018-07-222-4/+4
| | | | | | | Relnotes: http://doua.prabi.fr/software/seaview_data/CHANGES Notes: svn path=/head/; revision=475082
* biology/seaview: Update version 4.6.3=>4.6.5Muhammad Moinur Rahman2018-04-242-6/+8
| | | | | | | - Pet portlint Notes: svn path=/head/; revision=468198
* biology/seaview: Update version 4.6.2=>4.6.3Muhammad Moinur Rahman2018-01-053-7/+8
| | | | | | | | | - Added pkg-plist to pet portlint Relnotes: http://doua.prabi.fr/software/seaview_data/CHANGES Notes: svn path=/head/; revision=458157
* biology/seaview: Update version 4.6.1=>4.6.2Muhammad Moinur Rahman2017-07-212-4/+4
| | | | Notes: svn path=/head/; revision=446346
* biology/seaview: Update version 4.6=>4.6.1Muhammad Moinur Rahman2017-04-112-4/+5
| | | | | | | - Add PORTSCOUT to ignore non-existent 4.6.1.3 version Notes: svn path=/head/; revision=438306
* biology/seaview: Update version 4.5.4.8=>4.6Muhammad Moinur Rahman2016-06-102-7/+4
| | | | | | | - UNBREAK Notes: svn path=/head/; revision=416671
* Deprecate ports broken for more than 6 monthsAntoine Brodin2016-06-031-0/+2
| | | | Notes: svn path=/head/; revision=416324
* Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.Mathieu Arnold2016-04-011-2/+2
| | | | | | | | With hat: portmgr Sponsored by: Absolight Notes: svn path=/head/; revision=412344
* biology/seaview: Broken, Does not fetch (checksum mismatch)John Marino2015-11-021-0/+2
| | | | Notes: svn path=/head/; revision=400638
* biology/seaview: Update version 4.5.4.7=>4.5.4.8Muhammad Moinur Rahman2015-10-202-3/+3
| | | | Notes: svn path=/head/; revision=399820
* biology/seaview: Update version 4.5.4.6=>4.5.4.7Muhammad Moinur Rahman2015-10-012-4/+3
| | | | Notes: svn path=/head/; revision=398266
* biology/seaview: Update version 4.5.4.4=>4.5.4.6Muhammad Moinur Rahman2015-09-152-5/+5
| | | | Notes: svn path=/head/; revision=396964
* biology/seaview: Update version 4.5.4=>4.5.4.4Muhammad Moinur Rahman2015-05-222-3/+4
| | | | Notes: svn path=/head/; revision=387019
* biology/seaview: Unbreak -- it fetches fineJohn Marino2015-04-111-4/+1
| | | | | | | | | | | The second MASTER_SITES entry worked fine, so this must have been a transient fetch problem. I removed the first entry which is still failing though. Approved by: blanket Notes: svn path=/head/; revision=383812
* Mark as broken unfetchable portsBaptiste Daroussin2015-04-051-0/+2
| | | | Notes: svn path=/head/; revision=383309
* biology/seaview: Update version 4.5.3.4=>4.5.4Muhammad Moinur Rahman2015-03-243-41/+5
| | | | | | | - Remove dependency for libpdf as removed by upstream Notes: svn path=/head/; revision=382078
* biology/seaview: UNBREAKMuhammad Moinur Rahman2015-03-163-15/+38
| | | | | | | | | | | | | - Update version 4.5.2=>4.5.3.4 - Add LICENSE (GPLv3) - Remove PDFLIBS as OPTIONS as it is no loner an optional requirement PR: 198602 Submitted by: pi Approved by: bapt marino (implicit) Notes: svn path=/head/; revision=381381
* Mark BROKEN: Fails to link, tries to use internal fltk symbolsAntoine Brodin2015-02-211-0/+2
| | | | | | | | | | | | | | c++ -o seaview seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o Fl_Native_File_Chooser_FLTK.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o \ -L/usr/local/lib -lfltk_images -lfltk \ -lXft -lXext -lfontconfig -ljpeg -lpng -lXinerama -L/usr/local/lib -lpdf \ -lX11 -lm -lz -pthread seaview.o: In function `clipboard_contains_alignment(char const*)': seaview.cxx:(.text+0x1c14): undefined reference to `fl_selection_buffer' Reported by: pkg-fallout Notes: svn path=/head/; revision=379482
* Change my non-FreeBSD MAINTAINER mail to bofh@Muhammad Moinur Rahman2014-12-241-1/+1
| | | | | | | Approved by: bapt Notes: svn path=/head/; revision=375378
* Cleanup plistBaptiste Daroussin2014-12-201-1/+0
| | | | Notes: svn path=/head/; revision=375014
* Update the default version of GCC in the Ports Collection from GCC 4.7.4Gerald Pfeifer2014-09-101-0/+1
| | | | | | | | | | | | | to GCC 4.8.3. Part II, Bump PORTREVISIONs. PR: 192025 Tested by: antoine (-exp runs) Approved by: portmgr (implicit) Notes: svn path=/head/; revision=367888
* - Update to 4.5.2Martin Wilke2014-06-042-5/+5
| | | | | | | | | - Pass maintainership to submitter PR: 190564 Notes: svn path=/head/; revision=356437
* - Update to 4.5.1Martin Wilke2014-05-213-8/+13
| | | | | | | | PR: 187975 Submitted by: Ports Fury Notes: svn path=/head/; revision=354710
* - Stage supportMartin Wilke2014-02-272-21/+18
| | | | | | | | | | - Update to version 4.4.3 PR: 187041 Submitted by: ports fury Notes: svn path=/head/; revision=346262
* In preparation for making libtool generate libraries with a sane name, fix allBaptiste Daroussin2013-12-111-2/+2
| | | | | | | LIB_DEPENDS in biology Notes: svn path=/head/; revision=336171
* Add NO_STAGE all over the place in preparation for the staging support (cat: ↵Baptiste Daroussin2013-09-201-0/+1
| | | | | | | biology) Notes: svn path=/head/; revision=327709
* - Remove MAKE_JOBS_SAFE variableAlex Kozlov2013-08-141-1/+0
| | | | | | | Approved by: portmgr (bdrewery) Notes: svn path=/head/; revision=324744
* - Update to 4.4.2Martin Wilke2013-07-152-3/+3
| | | | | | | | PR: 180515 Submitted by: Ports Fury Notes: svn path=/head/; revision=323044
* - Update to 4.4.1Martin Wilke2013-03-262-25/+17
| | | | | | | | PR: 177257 Submitted by: Ports Fury Notes: svn path=/head/; revision=315253
* Bump PORTREVISION after DESKTOP_ENTRIES updateMax Brazhnikov2013-01-231-0/+1
| | | | Notes: svn path=/head/; revision=310871
* - Update DESKTOP_ENTRIES:Max Brazhnikov2013-01-071-2/+2
| | | | | | | | | | | | | * rephrase Comment field or use port ${COMMENT} if appropriate * adjust Icon field according to the Desktop Entry Specification * update Categories field: remove deprecated category Application; set main category, if missing - Remove indefinite article and/or rephrase COMMENT - Trim Makefile header - Other minor changes Notes: svn path=/head/; revision=310020
* - Update to version 4.4.0Pawel Pekala2012-10-305-76/+56
| | | | | | | | | | | | | | | | | - Mark MAKE_JOBS_SAFE - Make dependency on print/pdflib optional - Switch to PLIST_FILES While here: - Add missing deps - Add desktop entry PR: ports/172498 Submitted by: KATO Tsuguru <tkato432@yahoo.com> Feature safe: yes Notes: svn path=/head/; revision=306709
* - Reassign to the heap at maintainer's requestThomas Abthorpe2012-10-011-7/+2
| | | | Notes: svn path=/head/; revision=305130
* - update png to 1.5.10Dirk Meyer2012-06-011-1/+1
| | | | Notes: svn path=/head/; revision=297915
* Chase pdflib.so version and bump PORTREVISION accordingly.Alex Dupre2012-01-101-2/+2
| | | | Notes: svn path=/head/; revision=288888
* - unbreakPietro Cerutti2011-11-172-2/+29
| | | | | | | Feature safe: yes Notes: svn path=/head/; revision=285957
* - Mark BROKEN: does not compile with new fltkPav Lucistnik2011-11-041-0/+2
| | | | | | | Reported by: pointyhat Notes: svn path=/head/; revision=285056
* - Get Rid MD5 supportMartin Wilke2011-03-191-1/+0
| | | | Notes: svn path=/head/; revision=271305
* - update to 1.4.1Dirk Meyer2010-03-281-1/+1
| | | | | | | | Reviewed by: exp8 run on pointyhat Supported by: miwi Notes: svn path=/head/; revision=251605
* - Chase x11-toolkits/fltk updatePietro Cerutti2010-03-232-5/+5
| | | | Notes: svn path=/head/; revision=251412