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* biology/vcf-split: Update to 0.1.4Jason W. Bacon2022-03-152-5/+4
| | | | Minor update for biolibc 0.2.2 API changes
* biology/vcf-split: Update to 0.1.3.3Jason W. Bacon2021-12-142-5/+6
| | | | | | | Transfer header from multi-sample input Updates for evolving libxtend and biolibc APIs Add --version flag Numerous minor fixes and enhancements
* biology/vcf-split: Update to 0.1.2.14Jason W. Bacon2021-08-282-4/+5
| | | | Updates for libxtend and biolibc API changes
* biology/vcf-split: Update to 0.1.2Jason W. Bacon2021-06-112-5/+5
| | | | | | Updates for new biolibc API Changes: https://github.com/auerlab/vcf-split/releases
* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
| | | | Reported by: lwhsu
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
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* biology/vcf-split: Split a multi-sample VCF into single-sample VCFsJason W. Bacon2021-03-213-0/+34
Vcf-split splits a multi-sample VCF into single-sample VCFs, writing thousands of output files simultaneously. Parsing the TOPMed human chromosome 1 BCF with bcftools takes two days, so extracting the 137,977 samples one at a time or using thousands of parallel readers of the same file is impractical. Vcf-split solves this by generating thousands of single-sample outputs during a single sweep through the multi-sample input. Notes: svn path=/head/; revision=568922
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