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* math/R-cran-gss: updated to version 2.1-9David Naylor2018-06-023-6/+5
| | | | | | | | | | | | | | | - removed PORTREVISION due to version bump - update website URL to align with CRAN package - changelog: - R: Reworked ssllrm suite to add qd.wt. - man: Minor edit to reflect changes in R. - src: i) Changes and bug fixes in llrmnewton. ii) Minor edit in cdennewton. Generated by: portcran (0.1.8) Notes: svn path=/head/; revision=471358
* Bump PORTREVISIONs of all users of math/mpc that we just updated toGerald Pfeifer2018-03-101-0/+1
| | | | | | | version 1.1.0 (via revision 464079). Notes: svn path=/head/; revision=464084
* math/R-cran-gss: updated to version 2.1-7David Naylor2017-04-042-6/+5
| | | | | | | | | | | | | | | - updated license to align with CRAN package - changelog: - R: i) Added mkran1 and modified mkran to allow for multiple terms of random effects. ii) Added predict1.ssanova to allow for the evaluation of f(x1)-f(x2) along with standard errors. iii) Bug fixes in project.ssanova and summary.ssanova involving random effects. - man: Updated to reflect changes in R. Generated by: portcran (0.1.5) Notes: svn path=/head/; revision=437684
* math/R-cran-gss: updated to version 2.1-6David Naylor2016-08-302-4/+5
| | | | | | | | | - mark port as needing to compile Generated by: portcran (0.1.1) Notes: svn path=/head/; revision=421103
* math/R-cran-gss: update to 2.1-5.David Naylor2015-07-282-3/+3
| | | | | | | | ChangeLog: * NAMESPACE: Added 'importFrom(sats, ...)'. Notes: svn path=/head/; revision=393098
* Update math/R-cran-gss to 2.1-4.David Naylor2014-12-162-4/+3
| | | | | | | | | | ChangeLog: * R: Along with a bug fix, edited utility functions for the nbinomial family in the gssanova suite, eliminating unnecessary subtractions to preserve numerical precision. Notes: svn path=/head/; revision=374794
* Update the default version of GCC in the Ports Collection from GCC 4.7.4Gerald Pfeifer2014-09-101-0/+1
| | | | | | | | | | | | | to GCC 4.8.3. Part II, Bump PORTREVISIONs. PR: 192025 Tested by: antoine (-exp runs) Approved by: portmgr (implicit) Notes: svn path=/head/; revision=367888
* Update math/R-cran-gss to 2.1-3.David Naylor2014-07-272-3/+3
| | | | | | | | | | ChangeLog: * R: Edited utility functions for the binomial family in the gssanova suite, eliminating unnecessary subtractions to preserve numerical precision. Notes: svn path=/head/; revision=363097
* Update math/R-cran-gss to 2.1-2.David Naylor2014-06-162-3/+3
| | | | | | | | | ChangeLog: * inst: created the directory and added CITATION. * man: Updated references Notes: svn path=/head/; revision=357960
* Update math/R-cran-gss to 2.1-0.David Naylor2014-05-302-4/+3
| | | | | | | | | | | | ChangeLog: * R: i) Tuned Newton iteration algorithms in ngreg and ngreg.proj. ii) Bug fixes in routines involving univariate minimization via nlm0. iii) Minor changes in makedata.x's. Notes: svn path=/head/; revision=355878
* Update the default version of GCC used in the Ports Collection fromGerald Pfeifer2014-03-101-0/+1
| | | | | | | | | | | | | | GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as well as changing the default in Mk/bsd.default-versions.mk. Part II, Bump PORTREVISIONs. PR: 182136 Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports) Tested by: bdrewery (two -exp runs) Notes: svn path=/head/; revision=347809
* Convert Mk/bsd.cran.mk to the Uses framework.David Naylor2013-12-281-2/+1
| | | | | | | | | PR: ports/184699 Reviewed by: bapt Approved by: portmgr (bdrewery), wen (maintainer, timeout > 2 weeks) Notes: svn path=/head/; revision=337846
* Update math/R-cran-gss to 2.1-0.David Naylor2013-12-102-3/+3
| | | | | | | | | | ChangeLog: * R: i) Changed time domain specification in sshzd/sshzd1. ii) Removed from sshzd1 the option of external rho. * man: Minor edit in sshzd.Rd. Notes: svn path=/head/; revision=336052
* Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).David Naylor2013-11-271-1/+0
| | | | | | | | | | | | Since this patch converts all affected ports, bsd.cran.mk no longer supports NO_STAGE and errors out if NO_STAGE is set. Exp-run: ports/184216 Reviewed by: bdrewery Approved by: portsmgr, wen Notes: svn path=/head/; revision=335044
* Update math/R-cran-gss to 2.0.16.David Naylor2013-11-182-4/+3
| | | | | | | | | | ChangeLog: * R: i) Bug fix in survexp.sshzd. ii) Modified default values of qdsz.depth in ssden. * man: i) Updated references. ii) Added note in ssden.Rd. Notes: svn path=/head/; revision=334230
* Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;Brendan Fabeny2013-11-131-0/+1
| | | | | | | | | adjust dependent ports Reviewed by: pfg, thierry, tota Notes: svn path=/head/; revision=333659
* Update math/R-cran-gss to 2.0-15.David Naylor2013-10-272-4/+3
| | | | | | | | | | ChangeLog: * R: Bug fixes in summary.gssanova, summary.ssanova, and summary.ssanova9. Notes: svn path=/head/; revision=331799
* Update to libmpc version 1.0.1 which brings the following fixes:Gerald Pfeifer2013-10-261-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Switched to automake 1.11.6, see CVE-2012-3386. - #14669: Fixed extraction of CC from gmp.h. - Fixed case of intermediate zero real or imaginary part in mpc_fma, found by hydra with GMP_CHECK_RANDOMIZE=1346362345. This is on top of the following changes from version 1.0 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no invariant sections) for the documentation. - 100% of all lines are covered by tests - Renamed functions . mpc_mul_2exp to mpc_mul_2ui . mpc_div_2exp to mpc_div_2ui - 0^0, which returned (NaN,NaN) previously, now returns (1,+0). - Removed compatibility with K&R compilers, which was untestable due to lack of such compilers. - New functions . mpc_log10 . mpc_mul_2si, mpc_div_2si - Speed-ups . mpc_fma - Bug fixes . mpc_div and mpc_norm now return a value indicating the effective rounding direction, as the other functions. . mpc_mul, mpc_sqr and mpc_norm now return correct results even if there are over- or underflows during the computation. . mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has infinite part and equals output variable is corrected. . mpc_fr_sub: Wrong return value for imaginary part is corrected. Convert to the new LIB_DEPENDS standard and remove hard-coded .so versions from a couple of dependent ports. Bump PORTREVISIONS of all dependent ports. PR: 183141 Approved by: portmgr (bdrewery) Notes: svn path=/head/; revision=331644
* Add NO_STAGE all over the place in preparation for the staging support (cat: ↵Baptiste Daroussin2013-09-201-0/+1
| | | | | | | math) Notes: svn path=/head/; revision=327746
* Update math/R to 3.0.1-patched, and adjust dependent ports;Brendan Fabeny2013-05-281-0/+1
| | | | | | | | | | synchronize math/rpy with upstream repository Reviewed by: wen Approved by: wen, tota Notes: svn path=/head/; revision=319316
* Update math/R-cran-gss to 2.0-14.David Naylor2013-05-182-3/+3
| | | | | | | | | | ChangeLog: * R: Bug fixes in ssden1, sscden, sscden1 suites. Approved by: eadler.bdrewery (mentors, implicit) Notes: svn path=/head/; revision=318432
* Add new port math/R-cran-gss (2.0-13).David Naylor2013-05-053-0/+24
There is an existing port (finance/gss) with possible distfile conflict however upstream is not actively maintained and CRAN packages have a slightly different naming scheme making a future distfiles conflict unlikely. Approved by: eadler,bdrewery (mentors, implicit) Notes: svn path=/head/; revision=317429
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