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* science/afni: update to 21.3.05Fernando Apesteguía2021-11-103-11/+11
| | | | Reported by: portscout
* */*: Remove redundant '-[0-9]*' from CONFLICTSStefan Eßer2021-10-291-3/+3
| | | | | | | | | | | | | The conflict checks compare the patterns first against the package names without version (as reported by "pkg query "%n"), then - if there was no match - agsinst the full package names including the version (as reported by "pkg query "%n-%v"). Many CONFLICTS definitions used patterns like "bash-[0-9]*" to filter for the bash package in any version. But that pattern is functionally identical with just "bash". Approved by: portmgr (blanket)
* science/afni: fix build on non-x86Piotr Kubaj2021-10-222-2/+20
| | | | fpsetprec() is only on amd64 and i386 and requires x87 FPU. It's possible to build without x87, just how it's done on Linux.
* science/afni: update to 21.3.00Fernando Apesteguía2021-10-112-4/+4
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* science/afni: update to 21.2.10Fernando Apesteguía2021-10-062-4/+4
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* science/afni: update to 21.2.09Fernando Apesteguía2021-10-012-4/+4
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* science/afni: update to 21.2.06Fernando Apesteguía2021-09-125-12/+26
| | | | | | | | | | * Remove openmp support. We don't seem to need it. * Adjust patch * Add -fcommon to make it build in 13 and 14-current * Add patch to include -DPIC -fPIC in i386. Otherwise we get: ld: error: can't create dynamic relocation R_386_32 against symbol: .L.str.13 in readonly segment
* science/afni: update to 21.2.01Fernando Apesteguía2021-07-202-4/+4
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* science/afni: Update to 21.2.00Neel Chauhan2021-07-142-4/+4
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* science/afni: update to 21.1.20Fernando Apesteguía2021-06-292-4/+4
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* science/afni: update to 21.1.19Fernando Apesteguía2021-06-292-4/+4
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* science/afni: update to 21.1.16Fernando Apesteguía2021-06-242-4/+4
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* science/afni: update to 21.1.13Fernando Apesteguía2021-06-233-6/+10
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* graphics/mesa-libs: Bump reverse deps for libglvndKevin Bowling2021-06-221-1/+1
| | | | | | | | | | Per discussion with bapt on helping pkg handle the changing of these deps and avoiding impossible upgrade senarios. PR: 246767 Reviewed by: manu, bapt Approved by: x11 Differential Revision: https://reviews.freebsd.org/D30824
* math/gsl: update to 2.7Tobias C. Berner2021-06-161-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | From [1] * What is new in gsl-2.7: * fixed doc bug for gsl_histogram_min_bin (lhcsky at 163.com) * fixed bug #60335 (spmatrix test failure, J. Lamb) * fixed bug #36577 * clarified documentation on interpolation accelerators (V. Krishnan) * fixed bug #45521 (erroneous GSL_ERROR_NULL in ode-initval2, thanks to M. Sitte) * fixed doc bug #59758 * fixed bug #58202 (rstat median for n=5) * added support for native C complex number types in gsl_complex when using a C11 compiler * upgraded to autoconf 2.71, automake 1.16.3, libtool 2.4.6 * updated exponential fitting example for nonlinear least squares * added banded LU decomposition and solver (gsl_linalg_LU_band) * New functions added to the library: - gsl_matrix_norm1 - gsl_spmatrix_norm1 - gsl_matrix_complex_conjtrans_memcpy - gsl_linalg_QL: decomp, unpack - gsl_linalg_complex_QR_* (thanks to Christian Krueger) - gsl_vector_sum - gsl_matrix_scale_rows - gsl_matrix_scale_columns - gsl_multilarge_linear_matrix_ptr - gsl_multilarge_linear_rhs_ptr - gsl_spmatrix_dense_add (renamed from gsl_spmatrix_add_to_dense) - gsl_spmatrix_dense_sub - gsl_linalg_cholesky_band: solvem, svxm, scale, scale_apply - gsl_linalg_QR_UD: decomp, lssolve - gsl_linalg_QR_UU: decomp, lssolve, QTvec - gsl_linalg_QR_UZ: decomp - gsl_multifit_linear_lcurvature - gsl_spline2d_eval_extrap * bug fix in checking vector lengths in gsl_vector_memcpy (dieggsy@pm.me) * made gsl_sf_legendre_array_index() inline and documented - gsl_sf_legendre_nlm() [1] http://git.savannah.gnu.org/cgit/gsl.git/tree/NEWS PR: 256423 Exp-run by: antoine
* science/afni: update to 21.1.12Fernando Apesteguía2021-06-164-13/+19
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* science/afni: update to 21.1.09Fernando Apesteguía2021-05-312-4/+4
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* science/afni: update to 21.1.08Fernando Apesteguía2021-05-273-4/+5
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* science/afni: update to 21.1.07Fernando Apesteguía2021-05-132-4/+4
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* science/afni: update to 21.1.06Fernando Apesteguía2021-05-092-4/+4
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* science/afni: update to 21.1.04Fernando Apesteguía2021-05-072-4/+4
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* science/afni: update to 21.1.03Fernando Apesteguía2021-04-302-4/+4
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* science/afni: update to 21.1.02Fernando Apesteguía2021-04-183-6/+5
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* science/afni: update to 21.1.01Fernando Apesteguía2021-04-113-4/+5
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* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
| | | | Reported by: lwhsu
* science/afni: update to 21.1.00Fernando Apesteguía2021-04-072-4/+4
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* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
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* science/afni: update to 21.0.21Fernando Apesteguía2021-03-282-4/+4
| | | | Notes: svn path=/head/; revision=569378
* science/afni: update to 21.0.20Fernando Apesteguía2021-03-182-5/+5
| | | | | | | | | While here, adopt port. Reported by: portscout Notes: svn path=/head/; revision=568750
* science/afni: update to 21.0.19Fernando Apesteguía2021-03-172-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568676
* science/afni: Update to 21.0.18Neel Chauhan2021-03-162-4/+4
| | | | Notes: svn path=/head/; revision=568604
* science/afni: update to 21.0.17Fernando Apesteguía2021-03-152-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568439
* science/afni: update to 21.0.16Fernando Apesteguía2021-03-123-4/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568145
* science/afni: update to 21.0.15Fernando Apesteguía2021-03-112-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568069
* science/afni: update to 21.0.14Fernando Apesteguía2021-03-092-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=567907
* science/afni: Update to 21.0.13Neel Chauhan2021-03-052-4/+4
| | | | Notes: svn path=/head/; revision=567366
* science/afni: update to 21.0.12Fernando Apesteguía2021-03-013-4/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=566844
* science/afni: update to 21.0.10Fernando Apesteguía2021-02-243-4/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=566472
* science/afni: Update to 21.0.09Neel Chauhan2021-02-232-4/+4
| | | | Notes: svn path=/head/; revision=566432
* science/afni: update to 21.0.08Fernando Apesteguía2021-02-123-6/+6
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=565074
* science/afni: Update to 21.0.07Neel Chauhan2021-02-093-4/+6
| | | | Notes: svn path=/head/; revision=564824
* science/afni: update to 21.0.6Fernando Apesteguía2021-01-283-4/+6
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=563134
* science/afni: update to 21.0.04Fernando Apesteguía2021-01-202-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=562124
* science/afni: update to 21.0.03Fernando Apesteguía2021-01-172-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=561806
* science/afni: update to 21.0.02Fernando Apesteguía2021-01-132-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=561469
* science/afni: update to 21.0.00Fernando Apesteguía2021-01-103-10/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=561024
* science/afni: use math/qhull instead of expired math/qhull5Rene Ladan2021-01-041-1/+2
| | | | Notes: svn path=/head/; revision=560299
* science/afni: update to 20.3.04Fernando Apesteguía2020-12-273-4/+6
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=559359
* science/afni: update to 20.3.03Fernando Apesteguía2020-12-103-4/+8
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=557438
* science/afni: update to 20.3.02Fernando Apesteguía2020-11-153-12/+10
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=555239
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