aboutsummaryrefslogblamecommitdiff
path: root/biology/vsearch/pkg-descr
blob: 86302327f8bf46a6d69307097dd263c1a3d8a6a8 (plain) (tree)
1
2
3
4
5
6
7
8
9
10









                                                                             
VSEARCH supports de novo and reference based chimera detection, clustering,
full-length and prefix dereplication, rereplication, reverse complementation,
masking, all-vs-all pairwise global alignment, exact and global alignment
searching, shuffling, subsampling and sorting. It also supports FASTQ file
analysis, filtering, conversion and merging of paired-end reads.

The aim of this project is to create an alternative to the USEARCH tool
developed by Robert C. Edgar (2010).

WWW: https://github.com/torognes/vsearch