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authorYuri Victorovich <yuri@FreeBSD.org>2022-11-19 02:00:28 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2022-11-19 02:05:11 +0000
commit84e966ab78ac862a4e95d620d7acc0550df0841c (patch)
tree1889eaa73d4138d71e4970ef1a677bd6f46afdd7
parent0145a312fd984c998e15656fef6db06065e5cdd9 (diff)
downloadports-84e966ab78ac862a4e95d620d7acc0550df0841c.tar.gz
ports-84e966ab78ac862a4e95d620d7acc0550df0841c.zip
science/InsightToolkit: Update 5.2.1 -> 5.3rc04
Also include most remote modules.
-rw-r--r--science/InsightToolkit/Makefile43
-rw-r--r--science/InsightToolkit/Makefile.remote_modules116
-rw-r--r--science/InsightToolkit/Makefile.version2
-rw-r--r--science/InsightToolkit/distinfo122
-rwxr-xr-xscience/InsightToolkit/files/fake-git59
-rw-r--r--science/InsightToolkit/files/ftime.c56
-rwxr-xr-xscience/InsightToolkit/files/import-remote-modules.sh21
-rw-r--r--science/InsightToolkit/files/patch-CMakeLists.txt16
-rw-r--r--science/InsightToolkit/files/patch-CMake_ITKModuleExternal.cmake12
-rw-r--r--science/InsightToolkit/files/patch-CMake_ITKModuleTest.cmake6
-rw-r--r--science/InsightToolkit/files/patch-Modules_ThirdParty_MINC_src_libminc_CMakeLists.txt34
-rw-r--r--science/InsightToolkit/pkg-plist1032
12 files changed, 1443 insertions, 76 deletions
diff --git a/science/InsightToolkit/Makefile b/science/InsightToolkit/Makefile
index 7db2b6c1d2c2..954873f2ad72 100644
--- a/science/InsightToolkit/Makefile
+++ b/science/InsightToolkit/Makefile
@@ -1,6 +1,6 @@
PORTNAME= InsightToolkit
DISTVERSIONPREFIX= v
-DISTVERSION= 5.2.1
+DISTVERSION= 5.3rc04
CATEGORIES= science biology
MASTER_SITES= https://github.com/InsightSoftwareConsortium/ITK/releases/download/v${DISTVERSION}/:data
DISTFILES= InsightData-${DISTVERSION}.tar.gz:data
@@ -12,16 +12,23 @@ WWW= https://www.itk.org
LICENSE= APACHE20
LICENSE_FILE= ${WRKSRC}/LICENSE
-BUILD_DEPENDS= googletest>=0:devel/googletest
-LIB_DEPENDS= libgdcmCommon.so:devel/gdcm \
+BUILD_DEPENDS= googletest>=0:devel/googletest # gtest required for build, see https://github.com/InsightSoftwareConsortium/ITK/issues/3750
+LIB_DEPENDS= libfreetype.so:print/freetype2 \
+ libgdcmCommon.so:devel/gdcm \
libexpat.so:textproc/expat2 \
libfftw.so:math/fftw \
libhdf5.so:science/hdf5 \
libpng.so:graphics/png \
libsz.so:science/libaec \
libtiff.so:graphics/tiff
+# dependencies for optional modules
+LIB_DEPENDS+= libdcmjpls.so:graphics/dcmtk \
+ libvtkCommonCore-${VTK_VER}.so:math/vtk${VTK_VER:R}
+TEST_DEPENDS= googletest>0:devel/googletest
-USES= cmake:testing compiler:c++11-lang eigen:3 jpeg pkgconfig python:test
+USES= cmake:testing compiler:c++11-lang eigen:3 gl jpeg localbase:ldflags pkgconfig python:run,test xorg
+USE_GL= opengl
+USE_XORG= x11
USE_LDCONFIG= ${PREFIX}/lib/InsightToolkit
USE_GITHUB= yes
@@ -29,8 +36,8 @@ GH_ACCOUNT= InsightSoftwareConsortium
GH_PROJECT= ITK
CMAKE_ON= BUILD_SHARED_LIBS \
- ITK_FORBID_DOWNLOADS \
ITK_LEGACY_SILENT \
+ ITK_USE_SYSTEM_DCMTK \
ITK_USE_SYSTEM_EXPAT \
ITK_USE_SYSTEM_FFTW \
ITK_USE_SYSTEM_GDCM \
@@ -40,23 +47,26 @@ CMAKE_ON= BUILD_SHARED_LIBS \
ITK_USE_SYSTEM_PNG \
ITK_USE_SYSTEM_TIFF \
ITK_USE_SYSTEM_ZLIB \
- Module_ITKIOMIC \
Module_ITKIOTransformMINC \
+ Module_ITKIOPNG \
Module_ITKReview
CMAKE_ARGS= -DPython3_EXECUTABLE=${PYTHON_CMD}
CMAKE_OFF= ITK_USE_KWSTYLE BUILD_TESTING
-CMAKE_TESTING_ON= BUILD_TESTING # 3 tests are known to fail, see https://github.com/InsightSoftwareConsortium/ITK/issues/3739
+CMAKE_TESTING_ON= BUILD_TESTING # 4 tests are known to fail, see https://github.com/InsightSoftwareConsortium/ITK/issues/3739
+
+#LDFLAGS+= -lcompat # workaround for: ld: error: lib/liblpsolve55.so.5.5.2: undefined reference to ftime
+LDFLAGS+= -L${WRKSRC} -lftime # workaround for: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=257789, otherwise the above line should suffice
ITK_VER= ${PORTVERSION:R}
PLIST_SUB+= ITK_VER=${ITK_VER}
-OPTIONS_DEFINE= EXAMPLES TESTING
+OPTIONS_DEFINE= EXAMPLES
EXAMPLES_DESC= Build examples (very time consuming)
-TESTING_DESC= Build testing programs (very time consuming)
EXAMPLES_CMAKE_BOOL= BUILD_EXAMPLES
-TESTING_CMAKE_BOOL= BUILD_TESTING
+
+BINARY_ALIAS= git=${FILESDIR}/fake-git fetch=false
.include <bsd.port.pre.mk>
@@ -67,7 +77,16 @@ PLIST_SUB+= CHOSEN_COMPILER_TYPE="Clang"
.endif
post-extract:
- ${MV} ${WRKDIR}/${PORTNAME}-${PORTVERSION}/.ExternalData/* ${WRKSRC}/.ExternalData/
- ${RM} -r ${WRKDIR}/${PORTNAME}-${PORTVERSION}
+ @${MV} ${WRKDIR}/${PORTNAME}-${DISTVERSION}/.ExternalData/* ${WRKSRC}/.ExternalData/
+ @${RM} -r ${WRKDIR}/${PORTNAME}-${DISTVERSION}
+
+pre-configure: # workaround for https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=257789
+ @${SETENV} ${MAKE_ENV} ${CC} -c -fPIC ${FILESDIR}/ftime.c -o ${WRKSRC}/libftime.o
+ @${AR} -rcs ${WRKSRC}/libftime.a ${WRKSRC}/libftime.o
+
+post-install: # remove contentless docs
+ @${RM} -r ${STAGEDIR}${PREFIX}/share
+.include <Makefile.remote_modules>
+.include <../../math/vtk9/Makefile.version>
.include <bsd.port.post.mk>
diff --git a/science/InsightToolkit/Makefile.remote_modules b/science/InsightToolkit/Makefile.remote_modules
new file mode 100644
index 000000000000..ed3659eabd22
--- /dev/null
+++ b/science/InsightToolkit/Makefile.remote_modules
@@ -0,0 +1,116 @@
+GH_TUPLE+= \
+ ntustison:ITKAdaptiveDenoising:674218fae611184d4168bd0c7b027f1a0d1a8a18:ITKAdaptiveDenoising \
+ InsightSoftwareConsortium:itkAnalyzeObjectMap:6501909759a0de4ba99905d0f8e36005150f444a:itkAnalyzeObjectMap \
+ InsightSoftwareConsortium:ITKAnisotropicDiffusionLBR:66a74d2fc9584ff22a42b4beacb0dd9bc9e71d23:ITKAnisotropicDiffusionLBR \
+ InsightSoftwareConsortium:ITKBSplineGradient:ba1417c320c75ba0987e8a6cb12d9bb8a3f47365:ITKBSplineGradient \
+ InsightSoftwareConsortium:ITKBioCell:4cef62a2f426df1784cd4984e18f31c005b4c71c:ITKBioCell \
+ InsightSoftwareConsortium:ITKBoneEnhancement:68e550f7ba8dd6bc467d3d86aac463302b22dffd:ITKBoneEnhancement \
+ InsightSoftwareConsortium:ITKBoneMorphometry:391e5bcc5c57209447bf5b2f3a77ba59d3edfe57:ITKBoneMorphometry \
+ SCIInstitute:ITKCleaver:b1cec7c0d4a90927c051d61d20d623cf0f587ad5:ITKCleaver \
+ InsightSoftwareConsortium:ITKCuberille:6b0961120ec8aa03153ecab034d2f4dd192ef190:ITKCuberille \
+ SimonRit:ITKCudaCommon:2999fc30f6a8acfe8c94e9e79318a1a68439324e:ITKCudaCommon \
+ InsightSoftwareConsortium:ITKFixedPointInverseDisplacementField:b540bb41bc01313396093dfb078b1a74187d5cc9:ITKFixedPointInverseDisplacementField \
+ InsightSoftwareConsortium:ITKGenericLabelInterpolator:d804834d5af635241cb92ab0ef2197d6e4f4e50c:ITKGenericLabelInterpolator \
+ InsightSoftwareConsortium:ITKGrowCut:7e9959f46bf40fe23d9ae30364055ae29e6059d0:ITKGrowCut \
+ KitwareMedical:HASI:0f50ab50d6fb532f4276ca88b244dd3c000a0155:HASI \
+ InsightSoftwareConsortium:ITKHigherOrderAccurateGradient:b57ee45519e88b88bd46d5b8390b029f290311d9:ITKHigherOrderAccurateGradient \
+ InsightSoftwareConsortium:ITKIOFDF:0a170137bac5c5728f0b0e5134de269eb390ad62:ITKIOFDF \
+ InsightSoftwareConsortium:ITKIOMeshSTL:7841c1360990dac8cf6f4440b765b6b6aff73cc2:ITKIOMeshSTL \
+ InsightSoftwareConsortium:ITKIOMeshSWC:60a61652e6b87f66f7771c9c69dc76504c2471b8:ITKIOMeshSWC \
+ InsightSoftwareConsortium:ITKIOOpenSlide:fb654552e240e50bd4121d431d88536d2c84e937:ITKIOOpenSlide \
+ KitwareMedical:ITKIOScanco:f56c97b76ae26103e017eeaeebd6153af1223ff0:ITKIOScanco \
+ InsightSoftwareConsortium:ITKIOTransformDCMTK:649da7a2dc71a6d89ccdf7d3123906d0ae7c72dc:ITKIOTransformDCMTK \
+ InsightSoftwareConsortium:ITKIsotropicWavelets:0f901b815b67cc80480d66ad5841af4a8e669734:ITKIsotropicWavelets \
+ InsightSoftwareConsortium:ITKLabelErodeDilate:9cab6d555b5052f9e04714323755713ee05bf2db:ITKLabelErodeDilate \
+ InsightSoftwareConsortium:LesionSizingToolkit:c1a84175c73319e70083e44abedb655ca85d5c57:LesionSizingToolkit \
+ InsightSoftwareConsortium:itkMGHImageIO:b5b0d48e43335c8ae60f4441cc8ac2d9cafbfdb9:itkMGHImageIO \
+ InsightSoftwareConsortium:ITKMeshNoise:95cf5854e848e4c0f2d17eb2991e7606bdb5b955:ITKMeshNoise \
+ InsightSoftwareConsortium:ITKMeshToPolyData:a8f6f9c95523acbf6a2505c4fae1c35260e032eb:ITKMeshToPolyData \
+ InsightSoftwareConsortium:ITKMinimalPathExtraction:72ef4ad37a341f6c5f1b0fe1c10e454a27980309:ITKMinimalPathExtraction \
+ InsightSoftwareConsortium:ITKMontage:d4d7e4a35e7882896cd1b671c9922934ee7a5930:ITKMontage \
+ KitwareMedical:ITKMorphologicalContourInterpolation:e518b40cc863a7be4d986469decc52d3f60f14b8:ITKMorphologicalContourInterpolation \
+ KitwareMedical:MultipleImageIterator:15712259fed4a7f3b7d8171fd8f6c393df380a50:MultipleImageIterator \
+ InsightSoftwareConsortium:ITKParabolicMorphology:18d15dedd4de3886d0bf5529ffb48720d6de32ff:ITKParabolicMorphology \
+ InsightSoftwareConsortium:ITKPerformanceBenchmarking:f9a8dc22b67ec63eee023c0734fc7aa5f119356a:ITKPerformanceBenchmarking \
+ KitwareMedical:ITKPhaseSymmetry:0b6993c4f7d1d48db110d145f6f2b22c84e5f2dd:ITKPhaseSymmetry \
+ InsightSoftwareConsortium:ITKPolarTransform:930d44ac91d2994e4d604be67714f1ffb9cd065c:ITKPolarTransform \
+ InsightSoftwareConsortium:ITKPrincipalComponentsAnalysis:d4877819abc8a921a5cefee864a52324a2542721:ITKPrincipalComponentsAnalysis \
+ KitwareMedical:ITKRLEImage:e18b8daa31be436e1163888183cab36e5f4a5f05:ITKRLEImage \
+ SimonRit:RTK:d5112fc4bba7eb07c4556169ac652d088fc29fdf:RTK \
+ scifio:scifio-imageio:42b30ee7d50ef6c91e0d3153f400b62bc114b2f7:scifio_imageio \
+ SlicerSALT:ITKShape:918041aa5508996a7ca044d509e48583cb74f2ba:ITKShape \
+ InsightSoftwareConsortium:ITKSimpleITKFilters:f885603b630619a20155c03a5baca2f684b9a6a7:ITKSimpleITKFilters \
+ InsightSoftwareConsortium:ITKSkullStrip:9afa0491f5fa5fbeba8ca44edc0a0fb2712087b5:ITKSkullStrip \
+ InsightSoftwareConsortium:ITKSmoothingRecursiveYvvGaussianFilter:389754f659b47f05bf7b75f76de2500ce1f9428c:ITKSmoothingRecursiveYvvGaussianFilter \
+ InsightSoftwareConsortium:ITKSphinxExamples:3ac107a7a1e9b884a3d2e7636b923d5c4cfcbf3f:ITKSphinxExamples \
+ InsightSoftwareConsortium:ITKSplitComponents:3dfd5775ec5702428d6319091e58990e9fe1e42d:ITKSplitComponents \
+ KitwareMedical:ITKStrain:4fd046c85556c3514b436652002539573ce25125:ITKStrain \
+ InsightSoftwareConsortium:itkSubdivisionQuadEdgeMeshFilter:cb71f215dc8e35c5052e542082e14486d76d39fa:itkSubdivisionQuadEdgeMeshFilter \
+ InsightSoftwareConsortium:ITKTextureFeatures:8ff51060a2b2bda7b2e1068908afce266ea71b3f:ITKTextureFeatures \
+ InsightSoftwareConsortium:ITKThickness3D:6830cadf76194acf8394308efd8c043acd561369:ITKThickness3D \
+ InsightSoftwareConsortium:ITKTotalVariation:fe6a530857bdb573ce8a138651b3f369a4110a3d:ITKTotalVariation \
+ InsightSoftwareConsortium:ITKTubeTK:ac8ce8baee1dcabca5d32c3d42922aed458f8f79:ITKTubeTK \
+ InsightSoftwareConsortium:ITKTwoProjectionRegistration:8e775982245ab59710b1ce9d49cd8f06c7e74377:ITKTwoProjectionRegistration \
+ KitwareMedical:ITKUltrasound:2443abe29ae44799a5e189fb66c7b8b7a044dcdf:ITKUltrasound \
+ InsightSoftwareConsortium:ITKVariationalRegistration:f9db4b9a0149e3b0164dd524af124f0827c04b78:ITKVariationalRegistration \
+ InsightSoftwareConsortium:ITKVkFFTBackend:bce0b1cec6d4af7de9ed3d462c0a255cf0029c06:ITKVkFFTBackend \
+ InsightSoftwareConsortium:itk-wasm:802f937a97b4cd702f6e171f54e76665ac8df50d:itk_wasm \
+
+CMAKE_ON+=Module_AdaptiveDenoising
+CMAKE_ON+=Module_itkAnalyzeObjectMap
+CMAKE_OFF+=Module_AnisotropicDiffusionLBR
+CMAKE_ON+=Module_BSplineGradient
+CMAKE_OFF+=Module_BioCell
+CMAKE_OFF+=Module_BoneEnhancement
+CMAKE_ON+=Module_BoneMorphometry
+CMAKE_OFF+=Module_Cleaver # cmake tries to download https://github.com/SCIInstitute/Cleaver2
+CMAKE_ON+=Module_Cuberille
+CMAKE_OFF+=Module_CudaCommon # missing CUDA::cudart
+CMAKE_ON+=Module_FixedPointInverseDisplacementField
+CMAKE_ON+=Module_GenericLabelInterpolator
+CMAKE_ON+=Module_GrowCut
+CMAKE_ON+=Module_HASI
+CMAKE_ON+=Module_HigherOrderAccurateGradient
+CMAKE_ON+=Module_IOFDF
+CMAKE_ON+=Module_IOMeshSTL
+CMAKE_ON+=Module_IOMeshSWC
+CMAKE_OFF+=Module_IOOpenSlide # cmake fails: Please specify OPENSLIDE_LIBRARY and OPENSLIDE_INCLUDE_DIR.
+CMAKE_ON+=Module_IOScanco
+CMAKE_ON+=Module_IOTransformDCMTK
+CMAKE_OFF+=Module_IsotropicWavelets # cmake fails: No such module: "ITKImageIO"
+CMAKE_ON+=Module_LabelErodeDilate
+CMAKE_ON+=Module_LesionSizingToolkit
+CMAKE_ON+=Module_itkMGHImageIO
+CMAKE_ON+=Module_MeshNoise
+CMAKE_ON+=Module_MeshToPolyData
+CMAKE_ON+=Module_MinimalPathExtraction
+CMAKE_ON+=Module_Montage
+CMAKE_ON+=Module_MorphologicalContourInterpolation
+CMAKE_ON+=Module_MultipleImageIterator
+CMAKE_ON+=Module_ParabolicMorphology
+CMAKE_OFF+=Module_PerformanceBenchmarking # cmake fails: No such module: "PerformanceBenchmarking"
+CMAKE_ON+=Module_PhaseSymmetry
+CMAKE_ON+=Module_PolarTransform
+CMAKE_ON+=Module_PrincipalComponentsAnalysis
+CMAKE_ON+=Module_RLEImage
+CMAKE_ON+=Module_RTK
+CMAKE_ON+=Module_scifio-imageio
+CMAKE_ON+=Module_Shape
+CMAKE_ON+=Module_SimpleITKFilters
+CMAKE_ON+=Module_SkullStrip
+CMAKE_ON+=Module_SmoothingRecursiveYvvGaussianFilter
+CMAKE_OFF+=Module_SphinxExamples # fetches a lot of test files during build
+CMAKE_ON+=Module_SplitComponents
+CMAKE_ON+=Module_Strain
+CMAKE_ON+=Module_itkSubdivisionQuadEdgeMeshFilter
+CMAKE_ON+=Module_TextureFeatures
+CMAKE_ON+=Module_Thickness3D
+CMAKE_OFF+=Module_TotalVariation # fetches proxTV
+CMAKE_OFF+=Module_TubeTK # cmake error: get_target_property() called with non-existent target "VTK::hdf5_hl"
+CMAKE_ON+=Module_TwoProjectionRegistration
+CMAKE_OFF+=Module_Ultrasound # cmake fails: get_target_property() called with non-existent target "VTK::hdf5_hl"
+CMAKE_ON+=Module_VariationalRegistration
+CMAKE_OFF+=Module_VkFFTBackend # cmake fails: Could NOT find OpenCL (missing: OpenCL_LIBRARY OpenCL_INCLUDE_DIR)
+
+CMAKE_ON+=Module_itk-wasm
+
diff --git a/science/InsightToolkit/Makefile.version b/science/InsightToolkit/Makefile.version
index a6b042ca43a6..f746b9f182ac 100644
--- a/science/InsightToolkit/Makefile.version
+++ b/science/InsightToolkit/Makefile.version
@@ -1,3 +1,3 @@
# this file is provided for ITK users
-ITK_VER=5.2
+ITK_VER=5.3
diff --git a/science/InsightToolkit/distinfo b/science/InsightToolkit/distinfo
index 08a01bbf5ca9..b4116ac1ebab 100644
--- a/science/InsightToolkit/distinfo
+++ b/science/InsightToolkit/distinfo
@@ -1,5 +1,117 @@
-TIMESTAMP = 1668411091
-SHA256 (InsightData-5.2.1.tar.gz) = b5fcd209f456af289473ccc78f935b910168b852f3d4707d0c1e9dfd508b1757
-SIZE (InsightData-5.2.1.tar.gz) = 293448802
-SHA256 (InsightSoftwareConsortium-ITK-v5.2.1_GH0.tar.gz) = 6022b2b64624b8bcec3333fe48d5f74ff6ebceb3bdf98258ba7d7fbbc76b99ab
-SIZE (InsightSoftwareConsortium-ITK-v5.2.1_GH0.tar.gz) = 20955613
+TIMESTAMP = 1668730575
+SHA256 (InsightData-5.3rc04.tar.gz) = 05d50103048d54e316df599ffb56a9a4d1cb7086618a052136500100a6ddaf10
+SIZE (InsightData-5.3rc04.tar.gz) = 297871255
+SHA256 (InsightSoftwareConsortium-ITK-v5.3rc04_GH0.tar.gz) = 0859ec9aaa02bf23366287c5a5b15ebea16b84e4f428c8b649067c93cf462030
+SIZE (InsightSoftwareConsortium-ITK-v5.3rc04_GH0.tar.gz) = 21608648
+SHA256 (ntustison-ITKAdaptiveDenoising-674218fae611184d4168bd0c7b027f1a0d1a8a18_GH0.tar.gz) = 603675ffdc9735ede763ca9453525efa59ecc27417ec698ffaa87d28a750807c
+SIZE (ntustison-ITKAdaptiveDenoising-674218fae611184d4168bd0c7b027f1a0d1a8a18_GH0.tar.gz) = 757851
+SHA256 (InsightSoftwareConsortium-itkAnalyzeObjectMap-6501909759a0de4ba99905d0f8e36005150f444a_GH0.tar.gz) = e55627b40927a38df35a5514848987c786069507bb432d0a129360c3dc589275
+SIZE (InsightSoftwareConsortium-itkAnalyzeObjectMap-6501909759a0de4ba99905d0f8e36005150f444a_GH0.tar.gz) = 75758
+SHA256 (InsightSoftwareConsortium-ITKAnisotropicDiffusionLBR-66a74d2fc9584ff22a42b4beacb0dd9bc9e71d23_GH0.tar.gz) = 1783145a53535e4b0b441fb793ec29a3471e66bf18a11839a29797c9dd9fb639
+SIZE (InsightSoftwareConsortium-ITKAnisotropicDiffusionLBR-66a74d2fc9584ff22a42b4beacb0dd9bc9e71d23_GH0.tar.gz) = 43627
+SHA256 (InsightSoftwareConsortium-ITKBSplineGradient-ba1417c320c75ba0987e8a6cb12d9bb8a3f47365_GH0.tar.gz) = db2e3f1b4dc0d6cca025acca64600c92e758808ca56257019b9cdbdc22cfce18
+SIZE (InsightSoftwareConsortium-ITKBSplineGradient-ba1417c320c75ba0987e8a6cb12d9bb8a3f47365_GH0.tar.gz) = 20233
+SHA256 (InsightSoftwareConsortium-ITKBioCell-4cef62a2f426df1784cd4984e18f31c005b4c71c_GH0.tar.gz) = d400d88c2ed779c58e032665756a9cc66f071083049792754de4ac782e48db1b
+SIZE (InsightSoftwareConsortium-ITKBioCell-4cef62a2f426df1784cd4984e18f31c005b4c71c_GH0.tar.gz) = 7026750
+SHA256 (InsightSoftwareConsortium-ITKBoneEnhancement-68e550f7ba8dd6bc467d3d86aac463302b22dffd_GH0.tar.gz) = 42424bf9d2e2377268aab07b4cff70948a93b47c33360019a2aa25f650b31b67
+SIZE (InsightSoftwareConsortium-ITKBoneEnhancement-68e550f7ba8dd6bc467d3d86aac463302b22dffd_GH0.tar.gz) = 43705
+SHA256 (InsightSoftwareConsortium-ITKBoneMorphometry-391e5bcc5c57209447bf5b2f3a77ba59d3edfe57_GH0.tar.gz) = 615222bf1e65f737a2a6f469596e76311122e06807a9aca36253eb0bfb002f60
+SIZE (InsightSoftwareConsortium-ITKBoneMorphometry-391e5bcc5c57209447bf5b2f3a77ba59d3edfe57_GH0.tar.gz) = 1877081
+SHA256 (SCIInstitute-ITKCleaver-b1cec7c0d4a90927c051d61d20d623cf0f587ad5_GH0.tar.gz) = f8e4b15a916a4aab91aa7a15b74a0de5bc85d400405bf4a6d664cf8155e3e68a
+SIZE (SCIInstitute-ITKCleaver-b1cec7c0d4a90927c051d61d20d623cf0f587ad5_GH0.tar.gz) = 77405
+SHA256 (InsightSoftwareConsortium-ITKCuberille-6b0961120ec8aa03153ecab034d2f4dd192ef190_GH0.tar.gz) = 145bb28ac501ab6baf1a35f052561a1e23a20ce7311735b94b10a5bf4f1e4913
+SIZE (InsightSoftwareConsortium-ITKCuberille-6b0961120ec8aa03153ecab034d2f4dd192ef190_GH0.tar.gz) = 280824
+SHA256 (SimonRit-ITKCudaCommon-2999fc30f6a8acfe8c94e9e79318a1a68439324e_GH0.tar.gz) = c1a89317963a8e978d38c7aa404de70b5c421d742925fb6de37a5969afd3fa69
+SIZE (SimonRit-ITKCudaCommon-2999fc30f6a8acfe8c94e9e79318a1a68439324e_GH0.tar.gz) = 26276
+SHA256 (InsightSoftwareConsortium-ITKFixedPointInverseDisplacementField-b540bb41bc01313396093dfb078b1a74187d5cc9_GH0.tar.gz) = f4808923be41d986a63ac83318518c576c6a1bd4412657abba1c6b3b918e6bee
+SIZE (InsightSoftwareConsortium-ITKFixedPointInverseDisplacementField-b540bb41bc01313396093dfb078b1a74187d5cc9_GH0.tar.gz) = 5446460
+SHA256 (InsightSoftwareConsortium-ITKGenericLabelInterpolator-d804834d5af635241cb92ab0ef2197d6e4f4e50c_GH0.tar.gz) = b9238ba0be68b43913ae27178659c04507b3b37fdc174c05e599b8a8c1d4ecff
+SIZE (InsightSoftwareConsortium-ITKGenericLabelInterpolator-d804834d5af635241cb92ab0ef2197d6e4f4e50c_GH0.tar.gz) = 140442
+SHA256 (InsightSoftwareConsortium-ITKGrowCut-7e9959f46bf40fe23d9ae30364055ae29e6059d0_GH0.tar.gz) = d1ab17544b496d5c04102694e5bfd923c4669177954c94269418ec997537789d
+SIZE (InsightSoftwareConsortium-ITKGrowCut-7e9959f46bf40fe23d9ae30364055ae29e6059d0_GH0.tar.gz) = 27558
+SHA256 (KitwareMedical-HASI-0f50ab50d6fb532f4276ca88b244dd3c000a0155_GH0.tar.gz) = 8628cb7ef6eacf08ba16ea872b0a6909f4b81c6c5302387156a175e4ccf3e5e5
+SIZE (KitwareMedical-HASI-0f50ab50d6fb532f4276ca88b244dd3c000a0155_GH0.tar.gz) = 6302625
+SHA256 (InsightSoftwareConsortium-ITKHigherOrderAccurateGradient-b57ee45519e88b88bd46d5b8390b029f290311d9_GH0.tar.gz) = 60f63e121a7eed5c607920522cad7be0af11eac7871559151f896417694625f3
+SIZE (InsightSoftwareConsortium-ITKHigherOrderAccurateGradient-b57ee45519e88b88bd46d5b8390b029f290311d9_GH0.tar.gz) = 4477561
+SHA256 (InsightSoftwareConsortium-ITKIOFDF-0a170137bac5c5728f0b0e5134de269eb390ad62_GH0.tar.gz) = 99c1170235f56372bd85dc7faa5e85c5fa5fcc179ce6ffe3b9f6bcd36ddb4607
+SIZE (InsightSoftwareConsortium-ITKIOFDF-0a170137bac5c5728f0b0e5134de269eb390ad62_GH0.tar.gz) = 255691
+SHA256 (InsightSoftwareConsortium-ITKIOMeshSTL-7841c1360990dac8cf6f4440b765b6b6aff73cc2_GH0.tar.gz) = fce5a5fb434bd77876496267a72c3efe7ff9c6262896647147ed57befb253cd6
+SIZE (InsightSoftwareConsortium-ITKIOMeshSTL-7841c1360990dac8cf6f4440b765b6b6aff73cc2_GH0.tar.gz) = 21411
+SHA256 (InsightSoftwareConsortium-ITKIOMeshSWC-60a61652e6b87f66f7771c9c69dc76504c2471b8_GH0.tar.gz) = b553c136a1aed842ae5809e6f3bb91102e106581f1922626d0da4e49a7654d93
+SIZE (InsightSoftwareConsortium-ITKIOMeshSWC-60a61652e6b87f66f7771c9c69dc76504c2471b8_GH0.tar.gz) = 18341
+SHA256 (InsightSoftwareConsortium-ITKIOOpenSlide-fb654552e240e50bd4121d431d88536d2c84e937_GH0.tar.gz) = c73a8a206a876ed01b594b31b2213e5e5474d637060f2dd66a15d25b22047f3d
+SIZE (InsightSoftwareConsortium-ITKIOOpenSlide-fb654552e240e50bd4121d431d88536d2c84e937_GH0.tar.gz) = 26265
+SHA256 (KitwareMedical-ITKIOScanco-f56c97b76ae26103e017eeaeebd6153af1223ff0_GH0.tar.gz) = b545c124d6807b05fd82d7029be6cf808e7bf03aa6726eb79ebed23530da7881
+SIZE (KitwareMedical-ITKIOScanco-f56c97b76ae26103e017eeaeebd6153af1223ff0_GH0.tar.gz) = 36322
+SHA256 (InsightSoftwareConsortium-ITKIOTransformDCMTK-649da7a2dc71a6d89ccdf7d3123906d0ae7c72dc_GH0.tar.gz) = e4199ee803a1fd5355f206ce709cdc6759ed02fd667a86ea1104514ad22746ac
+SIZE (InsightSoftwareConsortium-ITKIOTransformDCMTK-649da7a2dc71a6d89ccdf7d3123906d0ae7c72dc_GH0.tar.gz) = 25038
+SHA256 (InsightSoftwareConsortium-ITKIsotropicWavelets-0f901b815b67cc80480d66ad5841af4a8e669734_GH0.tar.gz) = 71ca1eeeb8221c4eee4ab6015f93e34e72860f03b4ec903d443915cc0f3ce68e
+SIZE (InsightSoftwareConsortium-ITKIsotropicWavelets-0f901b815b67cc80480d66ad5841af4a8e669734_GH0.tar.gz) = 881653
+SHA256 (InsightSoftwareConsortium-ITKLabelErodeDilate-9cab6d555b5052f9e04714323755713ee05bf2db_GH0.tar.gz) = 8ee7abdb1ed4d2b9bba311553342875bdcf0682c0f4ae43028b482b5da89d1d8
+SIZE (InsightSoftwareConsortium-ITKLabelErodeDilate-9cab6d555b5052f9e04714323755713ee05bf2db_GH0.tar.gz) = 985379
+SHA256 (InsightSoftwareConsortium-LesionSizingToolkit-c1a84175c73319e70083e44abedb655ca85d5c57_GH0.tar.gz) = 75febe494ad6ed2ad42a9d0e69f3a5903f4856541bdc9bb8ae8a8dac14f8f78c
+SIZE (InsightSoftwareConsortium-LesionSizingToolkit-c1a84175c73319e70083e44abedb655ca85d5c57_GH0.tar.gz) = 1719111
+SHA256 (InsightSoftwareConsortium-itkMGHImageIO-b5b0d48e43335c8ae60f4441cc8ac2d9cafbfdb9_GH0.tar.gz) = cce9b44e6f09b6aba0f3ce7cbb51a42290cd04bcdf75a125723bbfc7aa72cea8
+SIZE (InsightSoftwareConsortium-itkMGHImageIO-b5b0d48e43335c8ae60f4441cc8ac2d9cafbfdb9_GH0.tar.gz) = 19265
+SHA256 (InsightSoftwareConsortium-ITKMeshNoise-95cf5854e848e4c0f2d17eb2991e7606bdb5b955_GH0.tar.gz) = b8fc09eab9a07e7a83894e0b1fa0c5374a49d4447047bcfa0592f272a664c9a7
+SIZE (InsightSoftwareConsortium-ITKMeshNoise-95cf5854e848e4c0f2d17eb2991e7606bdb5b955_GH0.tar.gz) = 14198
+SHA256 (InsightSoftwareConsortium-ITKMeshToPolyData-a8f6f9c95523acbf6a2505c4fae1c35260e032eb_GH0.tar.gz) = 4db18cfb0a32ba54945f53df8ddbbf1309cda7b55f591916e6613cfe0017421b
+SIZE (InsightSoftwareConsortium-ITKMeshToPolyData-a8f6f9c95523acbf6a2505c4fae1c35260e032eb_GH0.tar.gz) = 29755
+SHA256 (InsightSoftwareConsortium-ITKMinimalPathExtraction-72ef4ad37a341f6c5f1b0fe1c10e454a27980309_GH0.tar.gz) = b927ae52762c83d060f89506d3e2ab481443c853d5da3687fee48d1e65e4bda0
+SIZE (InsightSoftwareConsortium-ITKMinimalPathExtraction-72ef4ad37a341f6c5f1b0fe1c10e454a27980309_GH0.tar.gz) = 2874495
+SHA256 (InsightSoftwareConsortium-ITKMontage-d4d7e4a35e7882896cd1b671c9922934ee7a5930_GH0.tar.gz) = 484c6b6dac65a4d8e2eee69e06a8e737e0d7560ac2af073c56088f5ec89f398e
+SIZE (InsightSoftwareConsortium-ITKMontage-d4d7e4a35e7882896cd1b671c9922934ee7a5930_GH0.tar.gz) = 7987563
+SHA256 (KitwareMedical-ITKMorphologicalContourInterpolation-e518b40cc863a7be4d986469decc52d3f60f14b8_GH0.tar.gz) = ee125dc78a52c3f6f10eb0a4c25e057f74247eab955c13e4a1c82f549d432aa5
+SIZE (KitwareMedical-ITKMorphologicalContourInterpolation-e518b40cc863a7be4d986469decc52d3f60f14b8_GH0.tar.gz) = 2800080
+SHA256 (KitwareMedical-MultipleImageIterator-15712259fed4a7f3b7d8171fd8f6c393df380a50_GH0.tar.gz) = a509d9f446e647497bd30b7dd2b7e9848fdceb7d3ce29621f392ee3ae597dde0
+SIZE (KitwareMedical-MultipleImageIterator-15712259fed4a7f3b7d8171fd8f6c393df380a50_GH0.tar.gz) = 11475
+SHA256 (InsightSoftwareConsortium-ITKParabolicMorphology-18d15dedd4de3886d0bf5529ffb48720d6de32ff_GH0.tar.gz) = 3d137706ac8250220fa6c1ef36ef94e41ead0fce8639d2b1fdbba3ad5ebbc34a
+SIZE (InsightSoftwareConsortium-ITKParabolicMorphology-18d15dedd4de3886d0bf5529ffb48720d6de32ff_GH0.tar.gz) = 546060
+SHA256 (InsightSoftwareConsortium-ITKPerformanceBenchmarking-f9a8dc22b67ec63eee023c0734fc7aa5f119356a_GH0.tar.gz) = 74ba7193ee3ff82e27b6a2975d277c28d252b586a835c9cb0d8ae2fe4de01d20
+SIZE (InsightSoftwareConsortium-ITKPerformanceBenchmarking-f9a8dc22b67ec63eee023c0734fc7aa5f119356a_GH0.tar.gz) = 3090586
+SHA256 (KitwareMedical-ITKPhaseSymmetry-0b6993c4f7d1d48db110d145f6f2b22c84e5f2dd_GH0.tar.gz) = 0ab913c8a540d61f731d9396502edf24853a2262c98018374c49e3c65b11928a
+SIZE (KitwareMedical-ITKPhaseSymmetry-0b6993c4f7d1d48db110d145f6f2b22c84e5f2dd_GH0.tar.gz) = 27496
+SHA256 (InsightSoftwareConsortium-ITKPolarTransform-930d44ac91d2994e4d604be67714f1ffb9cd065c_GH0.tar.gz) = 1deb2041f28928c982ff0ec345436d4f50b4b23b48c31947168c45d11a934b33
+SIZE (InsightSoftwareConsortium-ITKPolarTransform-930d44ac91d2994e4d604be67714f1ffb9cd065c_GH0.tar.gz) = 121468
+SHA256 (InsightSoftwareConsortium-ITKPrincipalComponentsAnalysis-d4877819abc8a921a5cefee864a52324a2542721_GH0.tar.gz) = f1ad006636c35c1b72f6e0a0dda5e7780ce544959e46a5e92e42833d73968f46
+SIZE (InsightSoftwareConsortium-ITKPrincipalComponentsAnalysis-d4877819abc8a921a5cefee864a52324a2542721_GH0.tar.gz) = 112582
+SHA256 (KitwareMedical-ITKRLEImage-e18b8daa31be436e1163888183cab36e5f4a5f05_GH0.tar.gz) = d9a7781d57ef05ad8528e5c35c817a706798d7ef50cddfadc6d86abdae89d634
+SIZE (KitwareMedical-ITKRLEImage-e18b8daa31be436e1163888183cab36e5f4a5f05_GH0.tar.gz) = 762245
+SHA256 (SimonRit-RTK-d5112fc4bba7eb07c4556169ac652d088fc29fdf_GH0.tar.gz) = e66dcf1e3f1bba6ce6c7e96b5ce430241391ea95ded666bbc3988433d59de35b
+SIZE (SimonRit-RTK-d5112fc4bba7eb07c4556169ac652d088fc29fdf_GH0.tar.gz) = 1311494
+SHA256 (scifio-scifio-imageio-42b30ee7d50ef6c91e0d3153f400b62bc114b2f7_GH0.tar.gz) = eed6409eb26ab589299f1f6338398d039e6c952e8263ff83b3088df8aecc9749
+SIZE (scifio-scifio-imageio-42b30ee7d50ef6c91e0d3153f400b62bc114b2f7_GH0.tar.gz) = 26745
+SHA256 (SlicerSALT-ITKShape-918041aa5508996a7ca044d509e48583cb74f2ba_GH0.tar.gz) = be0690ef3cb23f890d2451b9acfe6fd260e3b858041fa8a0aef18663f4742c2c
+SIZE (SlicerSALT-ITKShape-918041aa5508996a7ca044d509e48583cb74f2ba_GH0.tar.gz) = 17309
+SHA256 (InsightSoftwareConsortium-ITKSimpleITKFilters-f885603b630619a20155c03a5baca2f684b9a6a7_GH0.tar.gz) = 5a325bd3f98389f3b6355de1c4e7b72412c833b90dbb75e661627fec869f00e9
+SIZE (InsightSoftwareConsortium-ITKSimpleITKFilters-f885603b630619a20155c03a5baca2f684b9a6a7_GH0.tar.gz) = 33568
+SHA256 (InsightSoftwareConsortium-ITKSkullStrip-9afa0491f5fa5fbeba8ca44edc0a0fb2712087b5_GH0.tar.gz) = 75c1e79e523af0f48fddbe3acf0a551c9dd089dc83ee9a0fab851ec2206efc50
+SIZE (InsightSoftwareConsortium-ITKSkullStrip-9afa0491f5fa5fbeba8ca44edc0a0fb2712087b5_GH0.tar.gz) = 741005
+SHA256 (InsightSoftwareConsortium-ITKSmoothingRecursiveYvvGaussianFilter-389754f659b47f05bf7b75f76de2500ce1f9428c_GH0.tar.gz) = 74ac2ed1f7f0d71340b7ce1453f7c2bc24edaa2e49bb17af1dae37b1fb1f22d9
+SIZE (InsightSoftwareConsortium-ITKSmoothingRecursiveYvvGaussianFilter-389754f659b47f05bf7b75f76de2500ce1f9428c_GH0.tar.gz) = 6162809
+SHA256 (InsightSoftwareConsortium-ITKSphinxExamples-3ac107a7a1e9b884a3d2e7636b923d5c4cfcbf3f_GH0.tar.gz) = 66d213d364f2a3570332641bf921221a92385a983260dea623905867d16e5a2e
+SIZE (InsightSoftwareConsortium-ITKSphinxExamples-3ac107a7a1e9b884a3d2e7636b923d5c4cfcbf3f_GH0.tar.gz) = 1521574
+SHA256 (InsightSoftwareConsortium-ITKSplitComponents-3dfd5775ec5702428d6319091e58990e9fe1e42d_GH0.tar.gz) = 8a31a3781a533b184544932fd7805b9dfbd8061ee9c63d44eb12e95ead997221
+SIZE (InsightSoftwareConsortium-ITKSplitComponents-3dfd5775ec5702428d6319091e58990e9fe1e42d_GH0.tar.gz) = 742578
+SHA256 (KitwareMedical-ITKStrain-4fd046c85556c3514b436652002539573ce25125_GH0.tar.gz) = 07b1ee2aac053c1f3cb390e97ecd522cb805d5d99fc14235f5abea18cfc3c98c
+SIZE (KitwareMedical-ITKStrain-4fd046c85556c3514b436652002539573ce25125_GH0.tar.gz) = 172308
+SHA256 (InsightSoftwareConsortium-itkSubdivisionQuadEdgeMeshFilter-cb71f215dc8e35c5052e542082e14486d76d39fa_GH0.tar.gz) = 95667270059ac3df41d7271722b0738707db836e2eb6af92a5e2d07860ae604b
+SIZE (InsightSoftwareConsortium-itkSubdivisionQuadEdgeMeshFilter-cb71f215dc8e35c5052e542082e14486d76d39fa_GH0.tar.gz) = 28953
+SHA256 (InsightSoftwareConsortium-ITKTextureFeatures-8ff51060a2b2bda7b2e1068908afce266ea71b3f_GH0.tar.gz) = 686f11feae7f6d408683be9dd0e5d49e94803129e68dd7a8030b1c6486e8fe90
+SIZE (InsightSoftwareConsortium-ITKTextureFeatures-8ff51060a2b2bda7b2e1068908afce266ea71b3f_GH0.tar.gz) = 702004
+SHA256 (InsightSoftwareConsortium-ITKThickness3D-6830cadf76194acf8394308efd8c043acd561369_GH0.tar.gz) = 7b054d2674a46158c65adcab373d92d0e769bca446b6f2abf9147f4956466636
+SIZE (InsightSoftwareConsortium-ITKThickness3D-6830cadf76194acf8394308efd8c043acd561369_GH0.tar.gz) = 26605
+SHA256 (InsightSoftwareConsortium-ITKTotalVariation-fe6a530857bdb573ce8a138651b3f369a4110a3d_GH0.tar.gz) = 84e4524a2d70c24dae97fe3c06dbd01e029f121bbb1484aba6e1fcffb98bfc2d
+SIZE (InsightSoftwareConsortium-ITKTotalVariation-fe6a530857bdb573ce8a138651b3f369a4110a3d_GH0.tar.gz) = 17117
+SHA256 (InsightSoftwareConsortium-ITKTubeTK-ac8ce8baee1dcabca5d32c3d42922aed458f8f79_GH0.tar.gz) = 7dfa4827aee17f86b06c3832dbdcda8305d3685e1f5c4a9fac0ce84673364706
+SIZE (InsightSoftwareConsortium-ITKTubeTK-ac8ce8baee1dcabca5d32c3d42922aed458f8f79_GH0.tar.gz) = 26078393
+SHA256 (InsightSoftwareConsortium-ITKTwoProjectionRegistration-8e775982245ab59710b1ce9d49cd8f06c7e74377_GH0.tar.gz) = 535fd8da799149b57ca197d0b65a34a3e3080f17d48e2dd128831330526ff7d3
+SIZE (InsightSoftwareConsortium-ITKTwoProjectionRegistration-8e775982245ab59710b1ce9d49cd8f06c7e74377_GH0.tar.gz) = 41759
+SHA256 (KitwareMedical-ITKUltrasound-2443abe29ae44799a5e189fb66c7b8b7a044dcdf_GH0.tar.gz) = 35cb196efdae548e13463bd86fcecde640505452e65e1ca4d826b8b01a4a2531
+SIZE (KitwareMedical-ITKUltrasound-2443abe29ae44799a5e189fb66c7b8b7a044dcdf_GH0.tar.gz) = 12560215
+SHA256 (InsightSoftwareConsortium-ITKVariationalRegistration-f9db4b9a0149e3b0164dd524af124f0827c04b78_GH0.tar.gz) = 6da23c407dde4c8552d62e865c87023a4ddbfc37595ccf240e139d4133bf6e7b
+SIZE (InsightSoftwareConsortium-ITKVariationalRegistration-f9db4b9a0149e3b0164dd524af124f0827c04b78_GH0.tar.gz) = 868593
+SHA256 (InsightSoftwareConsortium-ITKVkFFTBackend-bce0b1cec6d4af7de9ed3d462c0a255cf0029c06_GH0.tar.gz) = cac74e07733d979807ac2580bd360b834c09209ce920104a2cbdad6086ca08ca
+SIZE (InsightSoftwareConsortium-ITKVkFFTBackend-bce0b1cec6d4af7de9ed3d462c0a255cf0029c06_GH0.tar.gz) = 996939
+SHA256 (InsightSoftwareConsortium-itk-wasm-802f937a97b4cd702f6e171f54e76665ac8df50d_GH0.tar.gz) = 7d8eaa5f533dc0df4e2664d7cdd229c2d33b509794eb3739524d47fee5c14b86
+SIZE (InsightSoftwareConsortium-itk-wasm-802f937a97b4cd702f6e171f54e76665ac8df50d_GH0.tar.gz) = 3671659
diff --git a/science/InsightToolkit/files/fake-git b/science/InsightToolkit/files/fake-git
new file mode 100755
index 000000000000..47b0b2105789
--- /dev/null
+++ b/science/InsightToolkit/files/fake-git
@@ -0,0 +1,59 @@
+#!/bin/sh
+
+##
+## fake git to assist in downloads of remote modules
+##
+
+#echo "fake-git called with args: $@" >> /tmp/fake-git.log
+
+case "$1" in
+--version)
+ echo "git version 2.40.0"
+ exit 0
+ ;;
+clone)
+ # we don't run git clone
+ #/usr/local/bin/git clone $2 $3 >> /tmp/fake-git.log 2>&1
+
+ # args
+ url=$2
+ dir=$3
+
+ # extract module name
+ module=$(echo $url | sed -e "s|.*/||; s|\.git\$||")
+
+ # copy the tree
+ cp -r ../$module-* $dir
+
+ exit 0
+ ;;
+checkout)
+ # assume git checkout {hash}
+
+ # memorize the hash
+ echo $2 > .hash
+
+ exit 0
+ ;;
+config)
+ # ignore
+ exit 0
+ ;;
+remote)
+ # ignore
+ exit 0
+ ;;
+rev-parse)
+ # assume: git rev-parse --verify {HASH}
+ echo "@rev-parse pwd=$(pwd)" >> /tmp/fake-git.log
+ cat .hash
+
+ exit 0
+ ;;
+submodule)
+ # ignore: hope that there are no submodules
+ exit 0
+ ;;
+esac
+
+exit 1
diff --git a/science/InsightToolkit/files/ftime.c b/science/InsightToolkit/files/ftime.c
new file mode 100644
index 000000000000..04c747196003
--- /dev/null
+++ b/science/InsightToolkit/files/ftime.c
@@ -0,0 +1,56 @@
+// copied in verbatim from src
+
+/*-
+ * SPDX-License-Identifier: BSD-4-Clause
+ *
+ * Copyright (c) 1994 Christopher G. Demetriou
+ * All rights reserved.
+ *
+ * Redistribution and use in source and binary forms, with or without
+ * modification, are permitted provided that the following conditions
+ * are met:
+ * 1. Redistributions of source code must retain the above copyright
+ * notice, this list of conditions and the following disclaimer.
+ * 2. Redistributions in binary form must reproduce the above copyright
+ * notice, this list of conditions and the following disclaimer in the
+ * documentation and/or other materials provided with the distribution.
+ * 3. All advertising materials mentioning features or use of this software
+ * must display the following acknowledgement:
+ * This product includes software developed by Christopher G. Demetriou.
+ * 4. The name of the author may not be used to endorse or promote products
+ * derived from this software without specific prior written permission
+ *
+ * THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR
+ * IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
+ * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
+ * IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT,
+ * INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
+ * NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+ * DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
+ * THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+ * (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
+ * THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ */
+
+#include <sys/cdefs.h>
+__FBSDID("$FreeBSD$");
+
+#include <sys/types.h>
+#include <sys/time.h>
+#include <sys/timeb.h>
+
+int
+ftime(struct timeb *tbp)
+{
+ struct timezone tz;
+ struct timeval t;
+
+ if (gettimeofday(&t, &tz) < 0)
+ return (-1);
+ tbp->millitm = t.tv_usec / 1000;
+ tbp->time = t.tv_sec;
+ tbp->timezone = tz.tz_minuteswest;
+ tbp->dstflag = tz.tz_dsttime;
+
+ return (0);
+}
diff --git a/science/InsightToolkit/files/import-remote-modules.sh b/science/InsightToolkit/files/import-remote-modules.sh
new file mode 100755
index 000000000000..ca9deb811936
--- /dev/null
+++ b/science/InsightToolkit/files/import-remote-modules.sh
@@ -0,0 +1,21 @@
+#!/bin/sh
+
+##
+## script that converts remote module GitHub addresses to GH_TUPLE/CMAKE_ON values in Makefile.remote_modules
+##
+
+set -x
+
+(
+ # GH_TUPLE
+ echo "GH_TUPLE+= \\"
+ grep -h -E "^ (GIT_REPOSITORY |GIT_TAG )" $(make -V WRKSRC)/Modules/Remote/*.remote.cmake | \
+ sed -e 's| \${git_protocol}://github.com/| |; s|/| |; s|\.git$||' | \
+ awk '/^ GIT_REPOSITORY/ { printf("\t%s:%s:", $2, $3); name=$3 } /^ GIT_TAG/ { gsub("-","_",name); printf("%s:%s \\\n", $2, name) }'
+ echo ""
+
+ # CMAKE_ON
+ grep -h -E "^ GIT_REPOSITORY " $(make -V WRKSRC)/Modules/Remote/*.remote.cmake | \
+ sed -e 's|^ GIT_REPOSITORY \${git_protocol}://github.com/.*/|CMAKE_ON+=Module_|; s|ITK||; s|\.git$||'; \
+ echo ""
+) > Makefile.remote_modules
diff --git a/science/InsightToolkit/files/patch-CMakeLists.txt b/science/InsightToolkit/files/patch-CMakeLists.txt
new file mode 100644
index 000000000000..7c0d72f31563
--- /dev/null
+++ b/science/InsightToolkit/files/patch-CMakeLists.txt
@@ -0,0 +1,16 @@
+--- CMakeLists.txt.orig 2022-07-06 21:24:18 UTC
++++ CMakeLists.txt
+@@ -652,8 +652,11 @@ add_subdirectory(Utilities/Doxygen)
+
+ # Create target to download data from the ITKData group. This must come after
+ # all tests have been added that reference the group, so we put it last.
+-include(ExternalData)
+-ExternalData_Add_Target(ITKData)
++
++if (BUILD_TESTING)
++ include(ExternalData)
++ ExternalData_Add_Target(ITKData)
++endif()
+
+ mark_as_advanced(FORCE
+ Module_AdaptiveDenoising
diff --git a/science/InsightToolkit/files/patch-CMake_ITKModuleExternal.cmake b/science/InsightToolkit/files/patch-CMake_ITKModuleExternal.cmake
new file mode 100644
index 000000000000..bdf403187456
--- /dev/null
+++ b/science/InsightToolkit/files/patch-CMake_ITKModuleExternal.cmake
@@ -0,0 +1,12 @@
+--- CMake/ITKModuleExternal.cmake.orig 2022-11-18 08:12:04 UTC
++++ CMake/ITKModuleExternal.cmake
+@@ -221,6 +221,8 @@ endif()
+ # Create target to download data from the ITKData group. This must come after
+ # all tests have been added that reference the group, so we put it last.
+ if(NOT TARGET ITKData)
+- include(ExternalData)
++ if (BUILD_TESTING)
++ include(ExternalData)
++ endif()
+ ExternalData_Add_Target(ITKData)
+ endif()
diff --git a/science/InsightToolkit/files/patch-CMake_ITKModuleTest.cmake b/science/InsightToolkit/files/patch-CMake_ITKModuleTest.cmake
index 014ed3718758..1dc9cb92366a 100644
--- a/science/InsightToolkit/files/patch-CMake_ITKModuleTest.cmake
+++ b/science/InsightToolkit/files/patch-CMake_ITKModuleTest.cmake
@@ -1,10 +1,10 @@
---- CMake/ITKModuleTest.cmake.orig 2019-08-03 09:25:42 UTC
+--- CMake/ITKModuleTest.cmake.orig 2022-11-17 05:24:11 UTC
+++ CMake/ITKModuleTest.cmake
-@@ -244,6 +244,7 @@ endfunction()
+@@ -193,6 +193,7 @@ endfunction()
function(CreateGoogleTestDriver KIT KIT_LIBS KitTests)
set(exe "${KIT}GTestDriver")
+ find_package(GTest)
- add_executable(${exe} ${KitTests} )
+ add_executable(${exe} ${KitTests})
target_link_libraries(${exe} ${KIT_LIBS} GTest::GTest GTest::Main)
itk_module_target_label(${exe})
diff --git a/science/InsightToolkit/files/patch-Modules_ThirdParty_MINC_src_libminc_CMakeLists.txt b/science/InsightToolkit/files/patch-Modules_ThirdParty_MINC_src_libminc_CMakeLists.txt
deleted file mode 100644
index 5dc81a69c8fc..000000000000
--- a/science/InsightToolkit/files/patch-Modules_ThirdParty_MINC_src_libminc_CMakeLists.txt
+++ /dev/null
@@ -1,34 +0,0 @@
---- Modules/ThirdParty/MINC/src/libminc/CMakeLists.txt.orig 2019-07-28 10:06:31 UTC
-+++ Modules/ThirdParty/MINC/src/libminc/CMakeLists.txt
-@@ -403,11 +403,11 @@ SET(LIBMINC_STATIC_LIBRARIES ${LIBMINC_LIBRARY_STATIC}
- SET(LIBMINC_STATIC_LIBRARIES_CONFIG ${LIBMINC_LIBRARY_STATIC} ${HDF5_LIBRARY_NAME} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY_NAME})
-
- IF(UNIX)
-- SET(LIBMINC_LIBRARIES ${LIBMINC_LIBRARIES} m dl ${RT_LIBRARY})
-- SET(LIBMINC_STATIC_LIBRARIES ${LIBMINC_STATIC_LIBRARIES} m dl ${RT_LIBRARY})
-+ SET(LIBMINC_LIBRARIES ${LIBMINC_LIBRARIES} m ${CMAKE_DL_LIBS} ${RT_LIBRARY})
-+ SET(LIBMINC_STATIC_LIBRARIES ${LIBMINC_STATIC_LIBRARIES} m ${CMAKE_DL_LIBS} ${RT_LIBRARY})
-
-- SET(LIBMINC_LIBRARIES_CONFIG ${LIBMINC_LIBRARIES_CONFIG} m dl ${RT_LIBRARY_NAME})
-- SET(LIBMINC_STATIC_LIBRARIES_CONFIG ${LIBMINC_STATIC_LIBRARIES_CONFIG} m dl ${RT_LIBRARY_NAME})
-+ SET(LIBMINC_LIBRARIES_CONFIG ${LIBMINC_LIBRARIES_CONFIG} m ${CMAKE_DL_LIBS} ${RT_LIBRARY_NAME})
-+ SET(LIBMINC_STATIC_LIBRARIES_CONFIG ${LIBMINC_STATIC_LIBRARIES_CONFIG} m ${CMAKE_DL_LIBS} ${RT_LIBRARY_NAME})
- ENDIF(UNIX)
-
- SET(minc_LIB_SRCS ${minc2_LIB_SRCS} ${minc_common_SRCS})
-@@ -447,13 +447,13 @@ ENDIF(NOT LIBMINC_USE_SYSTEM_NIFTI AND NOT LIBMINC_EX
- #EXPORT(TARGETS ${LIBMINC_LIBRARY} FILE "${LIBMINC_EXPORTED_TARGETS}.cmake")
-
- IF(UNIX)
-- TARGET_LINK_LIBRARIES(${LIBMINC_LIBRARY} m dl )
-+ TARGET_LINK_LIBRARIES(${LIBMINC_LIBRARY} m ${CMAKE_DL_LIBS} )
-
- #ITK: Skip static library build
- IF(0)
- IF(LIBMINC_BUILD_SHARED_LIBS)
- ADD_LIBRARY(${LIBMINC_LIBRARY_STATIC} STATIC ${minc_LIB_SRCS} ${minc_HEADERS} ${volume_io_LIB_SRCS} ${volume_io_HEADERS} )
-- TARGET_LINK_LIBRARIES(${LIBMINC_LIBRARY_STATIC} ${HDF5_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY} ${RT_LIBRARY} m dl )
-+ TARGET_LINK_LIBRARIES(${LIBMINC_LIBRARY_STATIC} ${HDF5_LIBRARY} ${NIFTI_LIBRARIES} ${ZLIB_LIBRARY} ${RT_LIBRARY} m ${CMAKE_DL_LIBS} )
- IF(LIBMINC_MINC1_SUPPORT)
- TARGET_LINK_LIBRARIES(${LIBMINC_LIBRARY} ${NETCDF_LIBRARY})
- ENDIF(LIBMINC_MINC1_SUPPORT)
diff --git a/science/InsightToolkit/pkg-plist b/science/InsightToolkit/pkg-plist
index b5bb1687de8a..8ee3aea9bdcf 100644
--- a/science/InsightToolkit/pkg-plist
+++ b/science/InsightToolkit/pkg-plist
@@ -1,4 +1,69 @@
bin/itkTestDriver
+bin/rtkadmmtotalvariation
+bin/rtkadmmwavelets
+bin/rtkamsterdamshroud
+bin/rtkbackprojections
+bin/rtkbioscangeometry
+bin/rtkcheckimagequality
+bin/rtkconjugategradient
+bin/rtkdigisensgeometry
+bin/rtkdrawgeometricphantom
+bin/rtkdrawshepploganphantom
+bin/rtkdualenergysimplexdecomposition
+bin/rtkelektasynergygeometry
+bin/rtkextractphasesignal
+bin/rtkextractshroudsignal
+bin/rtkfdk
+bin/rtkfdktwodweights
+bin/rtkfieldofview
+bin/rtkforwardprojections
+bin/rtkfourdconjugategradient
+bin/rtkfourdfdk
+bin/rtkfourdrooster
+bin/rtkfourdsart
+bin/rtkgaincorrection
+bin/rtki0estimation
+bin/rtkimagxgeometry
+bin/rtkiterativefdk
+bin/rtklagcorrection
+bin/rtklastdimensionl0gradientdenoising
+bin/rtklut
+bin/rtkmaskcollimation
+bin/rtkmcrooster
+bin/rtkmotioncompensatedfourdconjugategradient
+bin/rtkorageometry
+bin/rtkosem
+bin/rtkoverlayphaseandshroud
+bin/rtkparkershortscanweighting
+bin/rtkprojectgeometricphantom
+bin/rtkprojectionmatrix
+bin/rtkprojections
+bin/rtkprojectshepploganphantom
+bin/rtkramp
+bin/rtkrayboxintersection
+bin/rtkrayquadricintersection
+bin/rtkregularizedconjugategradient
+bin/rtksart
+bin/rtkscatterglarecorrection
+bin/rtksimulatedgeometry
+bin/rtkspectraldenoiseprojections
+bin/rtkspectralforwardmodel
+bin/rtkspectralonestep
+bin/rtkspectralrooster
+bin/rtkspectralsimplexdecomposition
+bin/rtksubselect
+bin/rtktotalnuclearvariationdenoising
+bin/rtktotalvariationdenoising
+bin/rtktutorialapplication
+bin/rtkvarianobigeometry
+bin/rtkvarianprobeamgeometry
+bin/rtkvectorconjugategradient
+bin/rtkwangdisplaceddetectorweighting
+bin/rtkwarpedbackprojectsequence
+bin/rtkwarpedforwardprojectsequence
+bin/rtkwaveletsdenoising
+bin/rtkxradgeometry
+include/ITK-%%ITK_VER%%/AdaptiveDenoisingExport.h
include/ITK-%%ITK_VER%%/DICOMAppHelper.h
include/ITK-%%ITK_VER%%/DICOMBuffer.h
include/ITK-%%ITK_VER%%/DICOMCMakeConfig.h
@@ -9,6 +74,13 @@ include/ITK-%%ITK_VER%%/DICOMParser.h
include/ITK-%%ITK_VER%%/DICOMParserMap.h
include/ITK-%%ITK_VER%%/DICOMSource.h
include/ITK-%%ITK_VER%%/DICOMTypes.h
+include/ITK-%%ITK_VER%%/FibHeap.h
+include/ITK-%%ITK_VER%%/GrowCutExport.h
+include/ITK-%%ITK_VER%%/IOFDFExport.h
+include/ITK-%%ITK_VER%%/IOMeshSTLExport.h
+include/ITK-%%ITK_VER%%/IOMeshSWCExport.h
+include/ITK-%%ITK_VER%%/IOScancoExport.h
+include/ITK-%%ITK_VER%%/IOTransformDCMTKExport.h
include/ITK-%%ITK_VER%%/ITKBiasCorrectionExport.h
include/ITK-%%ITK_VER%%/ITKColormapExport.h
include/ITK-%%ITK_VER%%/ITKCommonExport.h
@@ -76,8 +148,14 @@ include/ITK-%%ITK_VER%%/ITKTransformExport.h
include/ITK-%%ITK_VER%%/ITKVTKExport.h
include/ITK-%%ITK_VER%%/ITKVideoCoreExport.h
include/ITK-%%ITK_VER%%/ITKVideoIOExport.h
+include/ITK-%%ITK_VER%%/ITKVtkGlueExport.h
include/ITK-%%ITK_VER%%/ITKWatershedsExport.h
+include/ITK-%%ITK_VER%%/MinimalPathExtractionExport.h
+include/ITK-%%ITK_VER%%/MontageExport.h
include/ITK-%%ITK_VER%%/NrrdIO.h
+include/ITK-%%ITK_VER%%/QuickView.h
+include/ITK-%%ITK_VER%%/RTKExport.h
+include/ITK-%%ITK_VER%%/SimpleITKFiltersExport.h
include/ITK-%%ITK_VER%%/VNLIterativeSparseSolverTraits.h
include/ITK-%%ITK_VER%%/VNLSparseLUSolverTraits.h
include/ITK-%%ITK_VER%%/arpack/dgetv0.h
@@ -151,9 +229,8 @@ include/ITK-%%ITK_VER%%/blas/ztrmm.h
include/ITK-%%ITK_VER%%/blas/ztrmv.h
include/ITK-%%ITK_VER%%/blas/ztrsv.h
include/ITK-%%ITK_VER%%/cached-powers.h
-include/ITK-%%ITK_VER%%/compilers/ITK_COMPILER_INFO_%%CHOSEN_COMPILER_TYPE%%_CXX.h
-include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_AppleClang_CXX.h
-include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_Clang_CXX.h
+include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_Apple%%CHOSEN_COMPILER_TYPE%%_CXX.h
+include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_%%CHOSEN_COMPILER_TYPE%%_CXX.h
include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_GNU_CXX.h
include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_Intel_CXX.h
include/ITK-%%ITK_VER%%/compilers/VXL_COMPILER_INFO_MSVC_CXX.h
@@ -212,11 +289,17 @@ include/ITK-%%ITK_VER%%/itkAdaptImageFilter.h
include/ITK-%%ITK_VER%%/itkAdaptiveEqualizationHistogram.h
include/ITK-%%ITK_VER%%/itkAdaptiveHistogramEqualizationImageFilter.h
include/ITK-%%ITK_VER%%/itkAdaptiveHistogramEqualizationImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkAdaptiveNonLocalMeansDenoisingImageFilter.h
+include/ITK-%%ITK_VER%%/itkAdaptiveNonLocalMeansDenoisingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkAddImageAdaptor.h
include/ITK-%%ITK_VER%%/itkAddImageFilter.h
include/ITK-%%ITK_VER%%/itkAddPixelAccessor.h
include/ITK-%%ITK_VER%%/itkAdditiveGaussianNoiseImageFilter.h
include/ITK-%%ITK_VER%%/itkAdditiveGaussianNoiseImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkAdditiveGaussianNoiseMeshFilter.h
+include/ITK-%%ITK_VER%%/itkAdditiveGaussianNoiseMeshFilter.hxx
+include/ITK-%%ITK_VER%%/itkAdditiveGaussianNoiseQuadEdgeMeshFilter.h
+include/ITK-%%ITK_VER%%/itkAdditiveGaussianNoiseQuadEdgeMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkAffineTransform.h
include/ITK-%%ITK_VER%%/itkAffineTransform.hxx
include/ITK-%%ITK_VER%%/itkAggregateLabelMapFilter.h
@@ -257,6 +340,8 @@ include/ITK-%%ITK_VER%%/itkArray.h
include/ITK-%%ITK_VER%%/itkArray.hxx
include/ITK-%%ITK_VER%%/itkArray2D.h
include/ITK-%%ITK_VER%%/itkArray2D.hxx
+include/ITK-%%ITK_VER%%/itkArrivalFunctionToPathFilter.h
+include/ITK-%%ITK_VER%%/itkArrivalFunctionToPathFilter.hxx
include/ITK-%%ITK_VER%%/itkArrowSpatialObject.h
include/ITK-%%ITK_VER%%/itkArrowSpatialObject.hxx
include/ITK-%%ITK_VER%%/itkAsinImageAdaptor.h
@@ -294,6 +379,8 @@ include/ITK-%%ITK_VER%%/itkAzimuthElevationToCartesianTransform.h
include/ITK-%%ITK_VER%%/itkAzimuthElevationToCartesianTransform.hxx
include/ITK-%%ITK_VER%%/itkBMPImageIO.h
include/ITK-%%ITK_VER%%/itkBMPImageIOFactory.h
+include/ITK-%%ITK_VER%%/itkBSplineApproximationGradientImageFilter.h
+include/ITK-%%ITK_VER%%/itkBSplineApproximationGradientImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBSplineBaseTransform.h
include/ITK-%%ITK_VER%%/itkBSplineBaseTransform.hxx
include/ITK-%%ITK_VER%%/itkBSplineCenteredL2ResampleImageFilterBase.h
@@ -315,6 +402,8 @@ include/ITK-%%ITK_VER%%/itkBSplineExponentialDiffeomorphicTransform.h
include/ITK-%%ITK_VER%%/itkBSplineExponentialDiffeomorphicTransform.hxx
include/ITK-%%ITK_VER%%/itkBSplineExponentialDiffeomorphicTransformParametersAdaptor.h
include/ITK-%%ITK_VER%%/itkBSplineExponentialDiffeomorphicTransformParametersAdaptor.hxx
+include/ITK-%%ITK_VER%%/itkBSplineGradientImageFilter.h
+include/ITK-%%ITK_VER%%/itkBSplineGradientImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBSplineInterpolateImageFunction.h
include/ITK-%%ITK_VER%%/itkBSplineInterpolateImageFunction.hxx
include/ITK-%%ITK_VER%%/itkBSplineInterpolationWeightFunction.h
@@ -325,6 +414,8 @@ include/ITK-%%ITK_VER%%/itkBSplineL2ResampleImageFilterBase.hxx
include/ITK-%%ITK_VER%%/itkBSplineResampleImageFilterBase.h
include/ITK-%%ITK_VER%%/itkBSplineResampleImageFilterBase.hxx
include/ITK-%%ITK_VER%%/itkBSplineResampleImageFunction.h
+include/ITK-%%ITK_VER%%/itkBSplineScatteredDataPointSetToGradientImageFilter.h
+include/ITK-%%ITK_VER%%/itkBSplineScatteredDataPointSetToGradientImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBSplineScatteredDataPointSetToImageFilter.h
include/ITK-%%ITK_VER%%/itkBSplineScatteredDataPointSetToImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.h
@@ -359,6 +450,8 @@ include/ITK-%%ITK_VER%%/itkBinShrinkImageFilter.h
include/ITK-%%ITK_VER%%/itkBinShrinkImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryBallStructuringElement.h
include/ITK-%%ITK_VER%%/itkBinaryBallStructuringElement.hxx
+include/ITK-%%ITK_VER%%/itkBinaryCloseParaImageFilter.h
+include/ITK-%%ITK_VER%%/itkBinaryCloseParaImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryClosingByReconstructionImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryClosingByReconstructionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryContourImageFilter.h
@@ -367,8 +460,12 @@ include/ITK-%%ITK_VER%%/itkBinaryCrossStructuringElement.h
include/ITK-%%ITK_VER%%/itkBinaryCrossStructuringElement.hxx
include/ITK-%%ITK_VER%%/itkBinaryDilateImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryDilateImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkBinaryDilateParaImageFilter.h
+include/ITK-%%ITK_VER%%/itkBinaryDilateParaImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryErodeImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryErodeImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkBinaryErodeParaImageFilter.h
+include/ITK-%%ITK_VER%%/itkBinaryErodeParaImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryFillholeImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryFillholeImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryFunctorImageFilter.h
@@ -404,6 +501,8 @@ include/ITK-%%ITK_VER%%/itkBinaryMorphologicalOpeningImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryMorphologyImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryMorphologyImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryNotImageFilter.h
+include/ITK-%%ITK_VER%%/itkBinaryOpenParaImageFilter.h
+include/ITK-%%ITK_VER%%/itkBinaryOpenParaImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryOpeningByReconstructionImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryOpeningByReconstructionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryOperationConcept.h
@@ -426,6 +525,10 @@ include/ITK-%%ITK_VER%%/itkBinaryStatisticsOpeningImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryStatisticsOpeningImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryThinningImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryThinningImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkBinaryThinningImageFilter3D.h
+include/ITK-%%ITK_VER%%/itkBinaryThinningImageFilter3D.hxx
+include/ITK-%%ITK_VER%%/itkBinaryThresholdFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkBinaryThresholdFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkBinaryThresholdImageFilter.h
include/ITK-%%ITK_VER%%/itkBinaryThresholdImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBinaryThresholdImageFunction.h
@@ -437,6 +540,7 @@ include/ITK-%%ITK_VER%%/itkBinomialBlurImageFilter.h
include/ITK-%%ITK_VER%%/itkBinomialBlurImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBioRadImageIO.h
include/ITK-%%ITK_VER%%/itkBioRadImageIOFactory.h
+include/ITK-%%ITK_VER%%/itkBitCast.h
include/ITK-%%ITK_VER%%/itkBitwiseOpsFunctors.h
include/ITK-%%ITK_VER%%/itkBlackTopHatImageFilter.h
include/ITK-%%ITK_VER%%/itkBlackTopHatImageFilter.hxx
@@ -447,6 +551,12 @@ include/ITK-%%ITK_VER%%/itkBlockMatchingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkBlueColormapFunction.h
include/ITK-%%ITK_VER%%/itkBlueColormapFunction.hxx
include/ITK-%%ITK_VER%%/itkBluePixelAccessor.h
+include/ITK-%%ITK_VER%%/itkBoneMorphometryFeaturesFilter.h
+include/ITK-%%ITK_VER%%/itkBoneMorphometryFeaturesFilter.hxx
+include/ITK-%%ITK_VER%%/itkBoneMorphometryFeaturesImageFilter.h
+include/ITK-%%ITK_VER%%/itkBoneMorphometryFeaturesImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkBoolean.h
+include/ITK-%%ITK_VER%%/itkBooleanStdVector.h
include/ITK-%%ITK_VER%%/itkBorderQuadEdgeMeshFilter.h
include/ITK-%%ITK_VER%%/itkBorderQuadEdgeMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkBoundedReciprocalImageFilter.h
@@ -467,6 +577,8 @@ include/ITK-%%ITK_VER%%/itkBruker2dseqImageIO.h
include/ITK-%%ITK_VER%%/itkBruker2dseqImageIOFactory.h
include/ITK-%%ITK_VER%%/itkBufferedImageNeighborhoodPixelAccessPolicy.h
include/ITK-%%ITK_VER%%/itkBuildInformation.h
+include/ITK-%%ITK_VER%%/itkButterworthFilterFreqImageSource.h
+include/ITK-%%ITK_VER%%/itkButterworthFilterFreqImageSource.hxx
include/ITK-%%ITK_VER%%/itkByteSwapper.h
include/ITK-%%ITK_VER%%/itkByteSwapper.hxx
include/ITK-%%ITK_VER%%/itkCSVArray2DDataObject.h
@@ -479,10 +591,20 @@ include/ITK-%%ITK_VER%%/itkCSVNumericObjectFileWriter.hxx
include/ITK-%%ITK_VER%%/itkCacheableScalarFunction.h
include/ITK-%%ITK_VER%%/itkCannyEdgeDetectionImageFilter.h
include/ITK-%%ITK_VER%%/itkCannyEdgeDetectionImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkCannyEdgeDetectionRecursiveGaussianImageFilter.h
+include/ITK-%%ITK_VER%%/itkCannyEdgeDetectionRecursiveGaussianImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkCannyEdgesDistanceAdvectionFieldFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkCannyEdgesDistanceAdvectionFieldFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkCannyEdgesDistanceFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkCannyEdgesDistanceFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkCannyEdgesFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkCannyEdgesFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkCannySegmentationLevelSetFunction.h
include/ITK-%%ITK_VER%%/itkCannySegmentationLevelSetFunction.hxx
include/ITK-%%ITK_VER%%/itkCannySegmentationLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkCannySegmentationLevelSetImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkCartesianToPolarTransform.h
+include/ITK-%%ITK_VER%%/itkCartesianToPolarTransform.hxx
include/ITK-%%ITK_VER%%/itkCastImageFilter.h
include/ITK-%%ITK_VER%%/itkCastImageFilter.hxx
include/ITK-%%ITK_VER%%/itkCastSpatialObjectFilter.h
@@ -545,6 +667,8 @@ include/ITK-%%ITK_VER%%/itkCompensatedSummation.hxx
include/ITK-%%ITK_VER%%/itkComplexBSplineInterpolateImageFunction.h
include/ITK-%%ITK_VER%%/itkComplexBSplineInterpolateImageFunction.hxx
include/ITK-%%ITK_VER%%/itkComplexConjugateImageAdaptor.h
+include/ITK-%%ITK_VER%%/itkComplexToComplex1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkComplexToComplex1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkComplexToComplexFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkComplexToComplexFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkComplexToImaginaryImageAdaptor.h
@@ -569,6 +693,8 @@ include/ITK-%%ITK_VER%%/itkConceptChecking.h
include/ITK-%%ITK_VER%%/itkConditionalConstIterator.h
include/ITK-%%ITK_VER%%/itkConfidenceConnectedImageFilter.h
include/ITK-%%ITK_VER%%/itkConfidenceConnectedImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkConfidenceConnectedSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkConfidenceConnectedSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkConfigure.h
include/ITK-%%ITK_VER%%/itkConformalFlatteningMeshFilter.h
include/ITK-%%ITK_VER%%/itkConformalFlatteningMeshFilter.hxx
@@ -587,6 +713,8 @@ include/ITK-%%ITK_VER%%/itkConnectedRegionsMeshFilter.h
include/ITK-%%ITK_VER%%/itkConnectedRegionsMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkConnectedThresholdImageFilter.h
include/ITK-%%ITK_VER%%/itkConnectedThresholdImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkConnectedThresholdSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkConnectedThresholdSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkConstNeighborhoodIterator.h
include/ITK-%%ITK_VER%%/itkConstNeighborhoodIterator.hxx
include/ITK-%%ITK_VER%%/itkConstNeighborhoodIteratorWithOnlyIndex.h
@@ -606,6 +734,8 @@ include/ITK-%%ITK_VER%%/itkConstantVelocityFieldTransformParametersAdaptor.hxx
include/ITK-%%ITK_VER%%/itkConstrainedRegionBasedLevelSetFunctionSharedData.h
include/ITK-%%ITK_VER%%/itkConstrainedValueAdditionImageFilter.h
include/ITK-%%ITK_VER%%/itkConstrainedValueDifferenceImageFilter.h
+include/ITK-%%ITK_VER%%/itkContinuousBorderWarpImageFilter.h
+include/ITK-%%ITK_VER%%/itkContinuousBorderWarpImageFilter.hxx
include/ITK-%%ITK_VER%%/itkContinuousIndex.h
include/ITK-%%ITK_VER%%/itkContourDirectedMeanDistanceImageFilter.h
include/ITK-%%ITK_VER%%/itkContourDirectedMeanDistanceImageFilter.hxx
@@ -630,6 +760,8 @@ include/ITK-%%ITK_VER%%/itkConvolutionImageFilter.h
include/ITK-%%ITK_VER%%/itkConvolutionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkConvolutionImageFilterBase.h
include/ITK-%%ITK_VER%%/itkConvolutionImageFilterBase.hxx
+include/ITK-%%ITK_VER%%/itkCoocurrenceTextureFeaturesImageFilter.h
+include/ITK-%%ITK_VER%%/itkCoocurrenceTextureFeaturesImageFilter.hxx
include/ITK-%%ITK_VER%%/itkCoolColormapFunction.h
include/ITK-%%ITK_VER%%/itkCoolColormapFunction.hxx
include/ITK-%%ITK_VER%%/itkCopperColormapFunction.h
@@ -662,6 +794,8 @@ include/ITK-%%ITK_VER%%/itkCropImageFilter.hxx
include/ITK-%%ITK_VER%%/itkCropLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkCropLabelMapFilter.hxx
include/ITK-%%ITK_VER%%/itkCrossHelper.h
+include/ITK-%%ITK_VER%%/itkCuberilleImageToMeshFilter.h
+include/ITK-%%ITK_VER%%/itkCuberilleImageToMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkCumulativeGaussianCostFunction.h
include/ITK-%%ITK_VER%%/itkCumulativeGaussianOptimizer.h
include/ITK-%%ITK_VER%%/itkCurvatureAnisotropicDiffusionImageFilter.h
@@ -681,6 +815,12 @@ include/ITK-%%ITK_VER%%/itkCustomColormapFunction.h
include/ITK-%%ITK_VER%%/itkCustomColormapFunction.hxx
include/ITK-%%ITK_VER%%/itkCyclicShiftImageFilter.h
include/ITK-%%ITK_VER%%/itkCyclicShiftImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkDCMTKTransformIO.h
+include/ITK-%%ITK_VER%%/itkDCMTKTransformIO.hxx
+include/ITK-%%ITK_VER%%/itkDCMTKTransformIOFactory.h
+include/ITK-%%ITK_VER%%/itkDICOMOrientImageFilter.h
+include/ITK-%%ITK_VER%%/itkDICOMOrientImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkDICOMOrientation.h
include/ITK-%%ITK_VER%%/itkDOMNode.h
include/ITK-%%ITK_VER%%/itkDOMNodeXMLReader.h
include/ITK-%%ITK_VER%%/itkDOMNodeXMLWriter.h
@@ -735,6 +875,13 @@ include/ITK-%%ITK_VER%%/itkDerivativeImageFilter.h
include/ITK-%%ITK_VER%%/itkDerivativeImageFilter.hxx
include/ITK-%%ITK_VER%%/itkDerivativeOperator.h
include/ITK-%%ITK_VER%%/itkDerivativeOperator.hxx
+include/ITK-%%ITK_VER%%/itkDescoteauxEigenToMeasureImageFilter.h
+include/ITK-%%ITK_VER%%/itkDescoteauxEigenToMeasureImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkDescoteauxEigenToMeasureParameterEstimationFilter.h
+include/ITK-%%ITK_VER%%/itkDescoteauxEigenToMeasureParameterEstimationFilter.hxx
+include/ITK-%%ITK_VER%%/itkDescoteauxSheetnessFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkDescoteauxSheetnessFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkDescoteauxSheetnessImageFilter.h
include/ITK-%%ITK_VER%%/itkDiffeomorphicDemonsRegistrationFilter.h
include/ITK-%%ITK_VER%%/itkDiffeomorphicDemonsRegistrationFilter.hxx
include/ITK-%%ITK_VER%%/itkDifferenceOfGaussiansGradientImageFilter.h
@@ -743,6 +890,7 @@ include/ITK-%%ITK_VER%%/itkDiffusionTensor3D.h
include/ITK-%%ITK_VER%%/itkDiffusionTensor3D.hxx
include/ITK-%%ITK_VER%%/itkDiffusionTensor3DReconstructionImageFilter.h
include/ITK-%%ITK_VER%%/itkDiffusionTensor3DReconstructionImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkDigitizerFunctor.h
include/ITK-%%ITK_VER%%/itkDilateObjectMorphologyImageFilter.h
include/ITK-%%ITK_VER%%/itkDilateObjectMorphologyImageFilter.hxx
include/ITK-%%ITK_VER%%/itkDirectFourierReconstructionImageToImageFilter.h
@@ -795,6 +943,10 @@ include/ITK-%%ITK_VER%%/itkEdgeDecimationQuadEdgeMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkEdgePotentialImageFilter.h
include/ITK-%%ITK_VER%%/itkEigenAnalysis2DImageFilter.h
include/ITK-%%ITK_VER%%/itkEigenAnalysis2DImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkEigenToMeasureImageFilter.h
+include/ITK-%%ITK_VER%%/itkEigenToMeasureImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkEigenToMeasureParameterEstimationFilter.h
+include/ITK-%%ITK_VER%%/itkEigenToMeasureParameterEstimationFilter.hxx
include/ITK-%%ITK_VER%%/itkElasticBodyReciprocalSplineKernelTransform.h
include/ITK-%%ITK_VER%%/itkElasticBodyReciprocalSplineKernelTransform.hxx
include/ITK-%%ITK_VER%%/itkElasticBodySplineKernelTransform.h
@@ -844,8 +996,15 @@ include/ITK-%%ITK_VER%%/itkExtractImageFilterRegionCopier.h
include/ITK-%%ITK_VER%%/itkExtractOrthogonalSwath2DImageFilter.h
include/ITK-%%ITK_VER%%/itkExtractOrthogonalSwath2DImageFilter.hxx
include/ITK-%%ITK_VER%%/itkExtrapolateImageFunction.h
+include/ITK-%%ITK_VER%%/itkFDFCommonImageIO.h
+include/ITK-%%ITK_VER%%/itkFDFImageIO.h
+include/ITK-%%ITK_VER%%/itkFDFImageIOFactory.h
include/ITK-%%ITK_VER%%/itkFFTConvolutionImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTConvolutionImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkFFTDiscreteGaussianImageFilter.h
+include/ITK-%%ITK_VER%%/itkFFTDiscreteGaussianImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkFFTDiscreteGaussianImageFilterFactory.h
+include/ITK-%%ITK_VER%%/itkFFTImageFilterFactory.h
include/ITK-%%ITK_VER%%/itkFFTNormalizedCorrelationImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTNormalizedCorrelationImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTPadImageFilter.h
@@ -853,13 +1012,21 @@ include/ITK-%%ITK_VER%%/itkFFTPadImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTShiftImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTShiftImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTWCommon.h
+include/ITK-%%ITK_VER%%/itkFFTWCommonExtended.h
+include/ITK-%%ITK_VER%%/itkFFTWComplexToComplex1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkFFTWComplexToComplex1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTWComplexToComplexFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTWComplexToComplexFFTImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkFFTWFFTImageFilterInitFactory.h
+include/ITK-%%ITK_VER%%/itkFFTWForward1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkFFTWForward1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTWForwardFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTWForwardFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTWGlobalConfiguration.h
include/ITK-%%ITK_VER%%/itkFFTWHalfHermitianToRealInverseFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTWHalfHermitianToRealInverseFFTImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkFFTWInverse1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkFFTWInverse1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTWInverseFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkFFTWInverseFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFFTWRealToHalfHermitianForwardFFTImageFilter.h
@@ -871,7 +1038,13 @@ include/ITK-%%ITK_VER%%/itkFancyString.hxx
include/ITK-%%ITK_VER%%/itkFastApproximateRankImageFilter.h
include/ITK-%%ITK_VER%%/itkFastChamferDistanceImageFilter.h
include/ITK-%%ITK_VER%%/itkFastChamferDistanceImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkFastGrowCut.h
+include/ITK-%%ITK_VER%%/itkFastGrowCut.hxx
include/ITK-%%ITK_VER%%/itkFastIncrementalBinaryDilateImageFilter.h
+include/ITK-%%ITK_VER%%/itkFastMarchingAndGeodesicActiveContourLevelSetSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkFastMarchingAndGeodesicActiveContourLevelSetSegmentationModule.hxx
+include/ITK-%%ITK_VER%%/itkFastMarchingAndShapeDetectionLevelSetSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkFastMarchingAndShapeDetectionLevelSetSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkFastMarchingBase.h
include/ITK-%%ITK_VER%%/itkFastMarchingBase.hxx
include/ITK-%%ITK_VER%%/itkFastMarchingExtensionImageFilter.h
@@ -888,6 +1061,8 @@ include/ITK-%%ITK_VER%%/itkFastMarchingNumberOfElementsStoppingCriterion.h
include/ITK-%%ITK_VER%%/itkFastMarchingQuadEdgeMeshFilterBase.h
include/ITK-%%ITK_VER%%/itkFastMarchingQuadEdgeMeshFilterBase.hxx
include/ITK-%%ITK_VER%%/itkFastMarchingReachedTargetNodesStoppingCriterion.h
+include/ITK-%%ITK_VER%%/itkFastMarchingSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkFastMarchingSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkFastMarchingStoppingCriterionBase.h
include/ITK-%%ITK_VER%%/itkFastMarchingThresholdStoppingCriterion.h
include/ITK-%%ITK_VER%%/itkFastMarchingTraits.h
@@ -899,6 +1074,10 @@ include/ITK-%%ITK_VER%%/itkFastSymmetricForcesDemonsRegistrationFilter.h
include/ITK-%%ITK_VER%%/itkFastSymmetricForcesDemonsRegistrationFilter.hxx
include/ITK-%%ITK_VER%%/itkFastSymmetricForcesDemonsRegistrationFunction.h
include/ITK-%%ITK_VER%%/itkFastSymmetricForcesDemonsRegistrationFunction.hxx
+include/ITK-%%ITK_VER%%/itkFeatureAggregator.h
+include/ITK-%%ITK_VER%%/itkFeatureAggregator.hxx
+include/ITK-%%ITK_VER%%/itkFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkFileListVideoIO.h
include/ITK-%%ITK_VER%%/itkFileListVideoIOFactory.h
include/ITK-%%ITK_VER%%/itkFileOutputWindow.h
@@ -913,10 +1092,14 @@ include/ITK-%%ITK_VER%%/itkFiniteDifferenceSparseImageFilter.h
include/ITK-%%ITK_VER%%/itkFiniteDifferenceSparseImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFiniteDifferenceSparseImageFunction.h
include/ITK-%%ITK_VER%%/itkFiniteDifferenceSparseImageFunction.hxx
+include/ITK-%%ITK_VER%%/itkFirstOrderTextureFeaturesImageFilter.h
+include/ITK-%%ITK_VER%%/itkFirstOrderTextureHistogram.h
include/ITK-%%ITK_VER%%/itkFixedArray.h
include/ITK-%%ITK_VER%%/itkFixedArray.hxx
include/ITK-%%ITK_VER%%/itkFixedCenterOfRotationAffineTransform.h
include/ITK-%%ITK_VER%%/itkFixedCenterOfRotationAffineTransform.hxx
+include/ITK-%%ITK_VER%%/itkFixedPointInverseDisplacementFieldImageFilter.h
+include/ITK-%%ITK_VER%%/itkFixedPointInverseDisplacementFieldImageFilter.hxx
include/ITK-%%ITK_VER%%/itkFlatStructuringElement.h
include/ITK-%%ITK_VER%%/itkFlatStructuringElement.hxx
include/ITK-%%ITK_VER%%/itkFlipImageFilter.h
@@ -931,6 +1114,8 @@ include/ITK-%%ITK_VER%%/itkFloodFilledImageFunctionConditionalIterator.h
include/ITK-%%ITK_VER%%/itkFloodFilledSpatialFunctionConditionalConstIterator.h
include/ITK-%%ITK_VER%%/itkFloodFilledSpatialFunctionConditionalConstIterator.hxx
include/ITK-%%ITK_VER%%/itkFloodFilledSpatialFunctionConditionalIterator.h
+include/ITK-%%ITK_VER%%/itkForward1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkForward1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkForwardDifferenceOperator.h
include/ITK-%%ITK_VER%%/itkForwardDifferenceOperator.hxx
include/ITK-%%ITK_VER%%/itkForwardFFTImageFilter.h
@@ -941,6 +1126,9 @@ include/ITK-%%ITK_VER%%/itkFrameAverageVideoFilter.h
include/ITK-%%ITK_VER%%/itkFrameAverageVideoFilter.hxx
include/ITK-%%ITK_VER%%/itkFrameDifferenceVideoFilter.h
include/ITK-%%ITK_VER%%/itkFrameDifferenceVideoFilter.hxx
+include/ITK-%%ITK_VER%%/itkFrangiTubularnessFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkFrangiTubularnessFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkFrangiTubularnessImageFilter.h
include/ITK-%%ITK_VER%%/itkFreeSurferAsciiMeshIO.h
include/ITK-%%ITK_VER%%/itkFreeSurferAsciiMeshIOFactory.h
include/ITK-%%ITK_VER%%/itkFreeSurferBinaryMeshIO.h
@@ -1018,6 +1206,8 @@ include/ITK-%%ITK_VER%%/itkGPUReduction.h
include/ITK-%%ITK_VER%%/itkGPUReduction.hxx
include/ITK-%%ITK_VER%%/itkGPUScalarAnisotropicDiffusionFunction.h
include/ITK-%%ITK_VER%%/itkGPUScalarAnisotropicDiffusionFunction.hxx
+include/ITK-%%ITK_VER%%/itkGPUSmoothingRecursiveYvvGaussianImageFilter.h
+include/ITK-%%ITK_VER%%/itkGPUSmoothingRecursiveYvvGaussianImageFilter.hxx
include/ITK-%%ITK_VER%%/itkGPUUnaryFunctorImageFilter.h
include/ITK-%%ITK_VER%%/itkGPUUnaryFunctorImageFilter.hxx
include/ITK-%%ITK_VER%%/itkGTest.h
@@ -1068,6 +1258,8 @@ include/ITK-%%ITK_VER%%/itkGeodesicActiveContourLevelSetFunction.h
include/ITK-%%ITK_VER%%/itkGeodesicActiveContourLevelSetFunction.hxx
include/ITK-%%ITK_VER%%/itkGeodesicActiveContourLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkGeodesicActiveContourLevelSetImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkGeodesicActiveContourLevelSetSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkGeodesicActiveContourLevelSetSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkGeodesicActiveContourShapePriorLevelSetFunction.h
include/ITK-%%ITK_VER%%/itkGeodesicActiveContourShapePriorLevelSetFunction.hxx
include/ITK-%%ITK_VER%%/itkGeodesicActiveContourShapePriorLevelSetImageFilter.h
@@ -1101,6 +1293,8 @@ include/ITK-%%ITK_VER%%/itkGradientMagnitudeImageFilter.h
include/ITK-%%ITK_VER%%/itkGradientMagnitudeImageFilter.hxx
include/ITK-%%ITK_VER%%/itkGradientMagnitudeRecursiveGaussianImageFilter.h
include/ITK-%%ITK_VER%%/itkGradientMagnitudeRecursiveGaussianImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkGradientMagnitudeSigmoidFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkGradientMagnitudeSigmoidFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkGradientNDAnisotropicDiffusionFunction.h
include/ITK-%%ITK_VER%%/itkGradientNDAnisotropicDiffusionFunction.hxx
include/ITK-%%ITK_VER%%/itkGradientRecursiveGaussianImageFilter.h
@@ -1127,10 +1321,13 @@ include/ITK-%%ITK_VER%%/itkGrayscaleGeodesicErodeImageFilter.h
include/ITK-%%ITK_VER%%/itkGrayscaleGeodesicErodeImageFilter.hxx
include/ITK-%%ITK_VER%%/itkGrayscaleGrindPeakImageFilter.h
include/ITK-%%ITK_VER%%/itkGrayscaleGrindPeakImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkGrayscaleImageSegmentationVolumeEstimator.h
+include/ITK-%%ITK_VER%%/itkGrayscaleImageSegmentationVolumeEstimator.hxx
include/ITK-%%ITK_VER%%/itkGrayscaleMorphologicalClosingImageFilter.h
include/ITK-%%ITK_VER%%/itkGrayscaleMorphologicalClosingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkGrayscaleMorphologicalOpeningImageFilter.h
include/ITK-%%ITK_VER%%/itkGrayscaleMorphologicalOpeningImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkGreaterEqualValImageFilter.h
include/ITK-%%ITK_VER%%/itkGreenColormapFunction.h
include/ITK-%%ITK_VER%%/itkGreenColormapFunction.hxx
include/ITK-%%ITK_VER%%/itkGreenPixelAccessor.h
@@ -1169,6 +1366,10 @@ include/ITK-%%ITK_VER%%/itkHeavisideStepFunction.hxx
include/ITK-%%ITK_VER%%/itkHeavisideStepFunctionBase.h
include/ITK-%%ITK_VER%%/itkHessian3DToVesselnessMeasureImageFilter.h
include/ITK-%%ITK_VER%%/itkHessian3DToVesselnessMeasureImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkHessianGaussianImageFilter.h
+include/ITK-%%ITK_VER%%/itkHessianGaussianImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkHessianImageFilter.h
+include/ITK-%%ITK_VER%%/itkHessianImageFilter.hxx
include/ITK-%%ITK_VER%%/itkHessianRecursiveGaussianImageFilter.h
include/ITK-%%ITK_VER%%/itkHessianRecursiveGaussianImageFilter.hxx
include/ITK-%%ITK_VER%%/itkHessianToObjectnessMeasureImageFilter.h
@@ -1176,6 +1377,12 @@ include/ITK-%%ITK_VER%%/itkHessianToObjectnessMeasureImageFilter.hxx
include/ITK-%%ITK_VER%%/itkHexahedronCell.h
include/ITK-%%ITK_VER%%/itkHexahedronCell.hxx
include/ITK-%%ITK_VER%%/itkHexahedronCellTopology.h
+include/ITK-%%ITK_VER%%/itkHigherOrderAccurateDerivativeImageFilter.h
+include/ITK-%%ITK_VER%%/itkHigherOrderAccurateDerivativeImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkHigherOrderAccurateDerivativeOperator.h
+include/ITK-%%ITK_VER%%/itkHigherOrderAccurateDerivativeOperator.hxx
+include/ITK-%%ITK_VER%%/itkHigherOrderAccurateGradientImageFilter.h
+include/ITK-%%ITK_VER%%/itkHigherOrderAccurateGradientImageFilter.hxx
include/ITK-%%ITK_VER%%/itkHilbertPath.h
include/ITK-%%ITK_VER%%/itkHilbertPath.hxx
include/ITK-%%ITK_VER%%/itkHistogram.h
@@ -1353,6 +1560,8 @@ include/ITK-%%ITK_VER%%/itkImageToImageMetricv4GetValueAndDerivativeThreader.h
include/ITK-%%ITK_VER%%/itkImageToImageMetricv4GetValueAndDerivativeThreader.hxx
include/ITK-%%ITK_VER%%/itkImageToImageMetricv4GetValueAndDerivativeThreaderBase.h
include/ITK-%%ITK_VER%%/itkImageToImageMetricv4GetValueAndDerivativeThreaderBase.hxx
+include/ITK-%%ITK_VER%%/itkImageToImageOfVectorsFilter.h
+include/ITK-%%ITK_VER%%/itkImageToImageOfVectorsFilter.hxx
include/ITK-%%ITK_VER%%/itkImageToListSampleAdaptor.h
include/ITK-%%ITK_VER%%/itkImageToListSampleAdaptor.hxx
include/ITK-%%ITK_VER%%/itkImageToListSampleFilter.h
@@ -1365,10 +1574,16 @@ include/ITK-%%ITK_VER%%/itkImageToParametricSpaceFilter.h
include/ITK-%%ITK_VER%%/itkImageToParametricSpaceFilter.hxx
include/ITK-%%ITK_VER%%/itkImageToPathFilter.h
include/ITK-%%ITK_VER%%/itkImageToPathFilter.hxx
+include/ITK-%%ITK_VER%%/itkImageToPointSetFilter.h
+include/ITK-%%ITK_VER%%/itkImageToPointSetFilter.hxx
include/ITK-%%ITK_VER%%/itkImageToSpatialObjectMetric.h
include/ITK-%%ITK_VER%%/itkImageToSpatialObjectMetric.hxx
include/ITK-%%ITK_VER%%/itkImageToSpatialObjectRegistrationMethod.h
include/ITK-%%ITK_VER%%/itkImageToSpatialObjectRegistrationMethod.hxx
+include/ITK-%%ITK_VER%%/itkImageToVTKImageFilter.h
+include/ITK-%%ITK_VER%%/itkImageToVTKImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkImageToVideoFilter.h
+include/ITK-%%ITK_VER%%/itkImageToVideoFilter.hxx
include/ITK-%%ITK_VER%%/itkImageVectorOptimizerParametersHelper.h
include/ITK-%%ITK_VER%%/itkImageVectorOptimizerParametersHelper.hxx
include/ITK-%%ITK_VER%%/itkImplicitManifoldNormalVectorFilter.h
@@ -1404,6 +1619,8 @@ include/ITK-%%ITK_VER%%/itkInterpolateImageFilter.hxx
include/ITK-%%ITK_VER%%/itkInterpolateImageFunction.h
include/ITK-%%ITK_VER%%/itkInterpolateImagePointsFilter.h
include/ITK-%%ITK_VER%%/itkInterpolateImagePointsFilter.hxx
+include/ITK-%%ITK_VER%%/itkInverse1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkInverse1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkInverseDeconvolutionImageFilter.h
include/ITK-%%ITK_VER%%/itkInverseDeconvolutionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkInverseDisplacementFieldImageFilter.h
@@ -1429,6 +1646,11 @@ include/ITK-%%ITK_VER%%/itkIsolatedWatershedImageFilter.h
include/ITK-%%ITK_VER%%/itkIsolatedWatershedImageFilter.hxx
include/ITK-%%ITK_VER%%/itkIsotropicFourthOrderLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkIsotropicFourthOrderLevelSetImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkIsotropicResampler.h
+include/ITK-%%ITK_VER%%/itkIsotropicResampler.hxx
+include/ITK-%%ITK_VER%%/itkIsotropicResamplerImageFilter.h
+include/ITK-%%ITK_VER%%/itkIsotropicResamplerImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkIterateNeighborhoodOptimizer.h
include/ITK-%%ITK_VER%%/itkIterationReporter.h
include/ITK-%%ITK_VER%%/itkIterativeDeconvolutionImageFilter.h
include/ITK-%%ITK_VER%%/itkIterativeDeconvolutionImageFilter.hxx
@@ -1480,9 +1702,16 @@ include/ITK-%%ITK_VER%%/itkKernelTransform.hxx
include/ITK-%%ITK_VER%%/itkKittlerIllingworthThresholdCalculator.h
include/ITK-%%ITK_VER%%/itkKittlerIllingworthThresholdCalculator.hxx
include/ITK-%%ITK_VER%%/itkKittlerIllingworthThresholdImageFilter.h
+include/ITK-%%ITK_VER%%/itkKrcahEigenToMeasureImageFilter.h
+include/ITK-%%ITK_VER%%/itkKrcahEigenToMeasureImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkKrcahEigenToMeasureParameterEstimationFilter.h
+include/ITK-%%ITK_VER%%/itkKrcahEigenToMeasureParameterEstimationFilter.hxx
+include/ITK-%%ITK_VER%%/itkKrcahPreprocessingImageToImageFilter.h
+include/ITK-%%ITK_VER%%/itkKrcahPreprocessingImageToImageFilter.hxx
include/ITK-%%ITK_VER%%/itkKullbackLeiblerCompareHistogramImageToImageMetric.h
include/ITK-%%ITK_VER%%/itkKullbackLeiblerCompareHistogramImageToImageMetric.hxx
include/ITK-%%ITK_VER%%/itkLBFGS2Optimizerv4.h
+include/ITK-%%ITK_VER%%/itkLBFGS2Optimizerv4.hxx
include/ITK-%%ITK_VER%%/itkLBFGSBOptimizer.h
include/ITK-%%ITK_VER%%/itkLBFGSBOptimizerv4.h
include/ITK-%%ITK_VER%%/itkLBFGSOptimizer.h
@@ -1497,6 +1726,8 @@ include/ITK-%%ITK_VER%%/itkLabelGeometryImageFilter.h
include/ITK-%%ITK_VER%%/itkLabelGeometryImageFilter.hxx
include/ITK-%%ITK_VER%%/itkLabelImageGaussianInterpolateImageFunction.h
include/ITK-%%ITK_VER%%/itkLabelImageGaussianInterpolateImageFunction.hxx
+include/ITK-%%ITK_VER%%/itkLabelImageGenericInterpolateImageFunction.h
+include/ITK-%%ITK_VER%%/itkLabelImageGenericInterpolateImageFunction.hxx
include/ITK-%%ITK_VER%%/itkLabelImageToLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkLabelImageToLabelMapFilter.hxx
include/ITK-%%ITK_VER%%/itkLabelImageToShapeLabelMapFilter.h
@@ -1533,7 +1764,16 @@ include/ITK-%%ITK_VER%%/itkLabelOverlapMeasuresImageFilter.hxx
include/ITK-%%ITK_VER%%/itkLabelOverlayFunctor.h
include/ITK-%%ITK_VER%%/itkLabelOverlayImageFilter.h
include/ITK-%%ITK_VER%%/itkLabelOverlayImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkLabelSelectionImageAdaptor.h
include/ITK-%%ITK_VER%%/itkLabelSelectionLabelMapFilter.h
+include/ITK-%%ITK_VER%%/itkLabelSelectionPixelAccessor.h
+include/ITK-%%ITK_VER%%/itkLabelSetDilateImageFilter.h
+include/ITK-%%ITK_VER%%/itkLabelSetDilateImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkLabelSetErodeImageFilter.h
+include/ITK-%%ITK_VER%%/itkLabelSetErodeImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkLabelSetMorphBaseImageFilter.h
+include/ITK-%%ITK_VER%%/itkLabelSetMorphBaseImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkLabelSetUtils.h
include/ITK-%%ITK_VER%%/itkLabelShapeKeepNObjectsImageFilter.h
include/ITK-%%ITK_VER%%/itkLabelShapeKeepNObjectsImageFilter.hxx
include/ITK-%%ITK_VER%%/itkLabelShapeOpeningImageFilter.h
@@ -1552,12 +1792,16 @@ include/ITK-%%ITK_VER%%/itkLabelVotingImageFilter.h
include/ITK-%%ITK_VER%%/itkLabelVotingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkLabeledPointSetToPointSetMetricv4.h
include/ITK-%%ITK_VER%%/itkLabeledPointSetToPointSetMetricv4.hxx
+include/ITK-%%ITK_VER%%/itkLandmarkAtlasSegmentationFilter.h
+include/ITK-%%ITK_VER%%/itkLandmarkAtlasSegmentationFilter.hxx
include/ITK-%%ITK_VER%%/itkLandmarkBasedTransformInitializer.h
include/ITK-%%ITK_VER%%/itkLandmarkBasedTransformInitializer.hxx
include/ITK-%%ITK_VER%%/itkLandmarkDisplacementFieldSource.h
include/ITK-%%ITK_VER%%/itkLandmarkDisplacementFieldSource.hxx
include/ITK-%%ITK_VER%%/itkLandmarkSpatialObject.h
include/ITK-%%ITK_VER%%/itkLandmarkSpatialObject.hxx
+include/ITK-%%ITK_VER%%/itkLandmarksReader.h
+include/ITK-%%ITK_VER%%/itkLandmarksReader.hxx
include/ITK-%%ITK_VER%%/itkLandweberDeconvolutionImageFilter.h
include/ITK-%%ITK_VER%%/itkLandweberDeconvolutionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkLaplacianDeformationQuadEdgeMeshFilter.h
@@ -1578,6 +1822,10 @@ include/ITK-%%ITK_VER%%/itkLaplacianSegmentationLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkLaplacianSegmentationLevelSetImageFilter.hxx
include/ITK-%%ITK_VER%%/itkLaplacianSharpeningImageFilter.h
include/ITK-%%ITK_VER%%/itkLaplacianSharpeningImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkLesionSegmentationImageFilter8.h
+include/ITK-%%ITK_VER%%/itkLesionSegmentationImageFilter8.hxx
+include/ITK-%%ITK_VER%%/itkLesionSegmentationMethod.h
+include/ITK-%%ITK_VER%%/itkLesionSegmentationMethod.hxx
include/ITK-%%ITK_VER%%/itkLevelSet.h
include/ITK-%%ITK_VER%%/itkLevelSetBase.h
include/ITK-%%ITK_VER%%/itkLevelSetBase.hxx
@@ -1673,8 +1921,11 @@ include/ITK-%%ITK_VER%%/itkLinearInterpolateImageFunction.h
include/ITK-%%ITK_VER%%/itkLinearInterpolateImageFunction.hxx
include/ITK-%%ITK_VER%%/itkListSample.h
include/ITK-%%ITK_VER%%/itkListSample.hxx
+include/ITK-%%ITK_VER%%/itkLocalStructureImageFilter.h
include/ITK-%%ITK_VER%%/itkLog10ImageAdaptor.h
include/ITK-%%ITK_VER%%/itkLog10ImageFilter.h
+include/ITK-%%ITK_VER%%/itkLogGaborFreqImageSource.h
+include/ITK-%%ITK_VER%%/itkLogGaborFreqImageSource.hxx
include/ITK-%%ITK_VER%%/itkLogImageAdaptor.h
include/ITK-%%ITK_VER%%/itkLogImageFilter.h
include/ITK-%%ITK_VER%%/itkLogOutput.h
@@ -1685,6 +1936,8 @@ include/ITK-%%ITK_VER%%/itkLoggerOutput.h
include/ITK-%%ITK_VER%%/itkLoggerThreadWrapper.h
include/ITK-%%ITK_VER%%/itkLoggerThreadWrapper.hxx
include/ITK-%%ITK_VER%%/itkLogicOpsFunctors.h
+include/ITK-%%ITK_VER%%/itkLungWallFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkLungWallFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkMINCImageIO.h
include/ITK-%%ITK_VER%%/itkMINCImageIOFactory.h
include/ITK-%%ITK_VER%%/itkMINCTransformAdapter.h
@@ -1707,6 +1960,7 @@ include/ITK-%%ITK_VER%%/itkMahalanobisDistanceMetric.h
include/ITK-%%ITK_VER%%/itkMahalanobisDistanceMetric.hxx
include/ITK-%%ITK_VER%%/itkMahalanobisDistanceThresholdImageFunction.h
include/ITK-%%ITK_VER%%/itkMahalanobisDistanceThresholdImageFunction.hxx
+include/ITK-%%ITK_VER%%/itkMakeFilled.h
include/ITK-%%ITK_VER%%/itkMalcolmSparseLevelSetImage.h
include/ITK-%%ITK_VER%%/itkMalcolmSparseLevelSetImage.hxx
include/ITK-%%ITK_VER%%/itkManhattanDistanceMetric.h
@@ -1721,6 +1975,8 @@ include/ITK-%%ITK_VER%%/itkMaskImageFilter.h
include/ITK-%%ITK_VER%%/itkMaskNegatedImageFilter.h
include/ITK-%%ITK_VER%%/itkMaskNeighborhoodOperatorImageFilter.h
include/ITK-%%ITK_VER%%/itkMaskNeighborhoodOperatorImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkMaskedAssignImageFilter.h
+include/ITK-%%ITK_VER%%/itkMaskedAssignImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMaskedFFTNormalizedCorrelationImageFilter.h
include/ITK-%%ITK_VER%%/itkMaskedFFTNormalizedCorrelationImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMaskedImageToHistogramFilter.h
@@ -1748,10 +2004,13 @@ include/ITK-%%ITK_VER%%/itkMattesMutualInformationImageToImageMetricv4.h
include/ITK-%%ITK_VER%%/itkMattesMutualInformationImageToImageMetricv4.hxx
include/ITK-%%ITK_VER%%/itkMattesMutualInformationImageToImageMetricv4GetValueAndDerivativeThreader.h
include/ITK-%%ITK_VER%%/itkMattesMutualInformationImageToImageMetricv4GetValueAndDerivativeThreader.hxx
+include/ITK-%%ITK_VER%%/itkMaximumAbsoluteValueImageFilter.h
include/ITK-%%ITK_VER%%/itkMaximumDecisionRule.h
include/ITK-%%ITK_VER%%/itkMaximumEntropyThresholdCalculator.h
include/ITK-%%ITK_VER%%/itkMaximumEntropyThresholdCalculator.hxx
include/ITK-%%ITK_VER%%/itkMaximumEntropyThresholdImageFilter.h
+include/ITK-%%ITK_VER%%/itkMaximumFeatureAggregator.h
+include/ITK-%%ITK_VER%%/itkMaximumFeatureAggregator.hxx
include/ITK-%%ITK_VER%%/itkMaximumImageFilter.h
include/ITK-%%ITK_VER%%/itkMaximumProjectionImageFilter.h
include/ITK-%%ITK_VER%%/itkMaximumRatioDecisionRule.h
@@ -1779,6 +2038,8 @@ include/ITK-%%ITK_VER%%/itkMeanSquaresImageToImageMetricv4GetValueAndDerivativeT
include/ITK-%%ITK_VER%%/itkMeanSquaresPointSetToImageMetric.h
include/ITK-%%ITK_VER%%/itkMeanSquaresPointSetToImageMetric.hxx
include/ITK-%%ITK_VER%%/itkMeasurementVectorTraits.h
+include/ITK-%%ITK_VER%%/itkMedialThicknessImageFilter3D.h
+include/ITK-%%ITK_VER%%/itkMedialThicknessImageFilter3D.hxx
include/ITK-%%ITK_VER%%/itkMedianImageFilter.h
include/ITK-%%ITK_VER%%/itkMedianImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMedianImageFunction.h
@@ -1805,6 +2066,9 @@ include/ITK-%%ITK_VER%%/itkMeshFileWriter.hxx
include/ITK-%%ITK_VER%%/itkMeshFileWriterException.h
include/ITK-%%ITK_VER%%/itkMeshIOBase.h
include/ITK-%%ITK_VER%%/itkMeshIOFactory.h
+include/ITK-%%ITK_VER%%/itkMeshIOTestHelper.h
+include/ITK-%%ITK_VER%%/itkMeshProcrustesAlignFilter.h
+include/ITK-%%ITK_VER%%/itkMeshProcrustesAlignFilter.hxx
include/ITK-%%ITK_VER%%/itkMeshRegion.h
include/ITK-%%ITK_VER%%/itkMeshSource.h
include/ITK-%%ITK_VER%%/itkMeshSource.hxx
@@ -1812,6 +2076,8 @@ include/ITK-%%ITK_VER%%/itkMeshSpatialObject.h
include/ITK-%%ITK_VER%%/itkMeshSpatialObject.hxx
include/ITK-%%ITK_VER%%/itkMeshToMeshFilter.h
include/ITK-%%ITK_VER%%/itkMeshToMeshFilter.hxx
+include/ITK-%%ITK_VER%%/itkMeshToPolyDataFilter.h
+include/ITK-%%ITK_VER%%/itkMeshToPolyDataFilter.hxx
include/ITK-%%ITK_VER%%/itkMetaArrayReader.h
include/ITK-%%ITK_VER%%/itkMetaArrayWriter.h
include/ITK-%%ITK_VER%%/itkMetaArrowConverter.h
@@ -1862,6 +2128,8 @@ include/ITK-%%ITK_VER%%/itkMinMaxCurvatureFlowImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMiniPipelineSeparableImageFilter.h
include/ITK-%%ITK_VER%%/itkMiniPipelineSeparableImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMinimumDecisionRule.h
+include/ITK-%%ITK_VER%%/itkMinimumFeatureAggregator.h
+include/ITK-%%ITK_VER%%/itkMinimumFeatureAggregator.hxx
include/ITK-%%ITK_VER%%/itkMinimumImageFilter.h
include/ITK-%%ITK_VER%%/itkMinimumMaximumImageCalculator.h
include/ITK-%%ITK_VER%%/itkMinimumMaximumImageCalculator.hxx
@@ -1877,8 +2145,21 @@ include/ITK-%%ITK_VER%%/itkModulusImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMomentsThresholdCalculator.h
include/ITK-%%ITK_VER%%/itkMomentsThresholdCalculator.hxx
include/ITK-%%ITK_VER%%/itkMomentsThresholdImageFilter.h
+include/ITK-%%ITK_VER%%/itkMorphSDTHelperImageFilter.h
+include/ITK-%%ITK_VER%%/itkMorphologicalContourInterpolator.h
+include/ITK-%%ITK_VER%%/itkMorphologicalContourInterpolator.hxx
+include/ITK-%%ITK_VER%%/itkMorphologicalDistanceTransformImageFilter.h
+include/ITK-%%ITK_VER%%/itkMorphologicalDistanceTransformImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMorphologicalGradientImageFilter.h
include/ITK-%%ITK_VER%%/itkMorphologicalGradientImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkMorphologicalOpeningFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkMorphologicalOpeningFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkMorphologicalOpenningFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkMorphologicalOpenningFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkMorphologicalSharpeningImageFilter.h
+include/ITK-%%ITK_VER%%/itkMorphologicalSharpeningImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkMorphologicalSignedDistanceTransformImageFilter.h
+include/ITK-%%ITK_VER%%/itkMorphologicalSignedDistanceTransformImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMorphologicalWatershedFromMarkersImageFilter.h
include/ITK-%%ITK_VER%%/itkMorphologicalWatershedFromMarkersImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMorphologicalWatershedImageFilter.h
@@ -1907,6 +2188,8 @@ include/ITK-%%ITK_VER%%/itkMultiResolutionPyramidImageFilter.h
include/ITK-%%ITK_VER%%/itkMultiResolutionPyramidImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMultiScaleHessianBasedMeasureImageFilter.h
include/ITK-%%ITK_VER%%/itkMultiScaleHessianBasedMeasureImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkMultiScaleHessianEnhancementImageFilter.h
+include/ITK-%%ITK_VER%%/itkMultiScaleHessianEnhancementImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMultiStartOptimizerv4.h
include/ITK-%%ITK_VER%%/itkMultiStartOptimizerv4.hxx
include/ITK-%%ITK_VER%%/itkMultiThreaderBase.h
@@ -1918,6 +2201,7 @@ include/ITK-%%ITK_VER%%/itkMultiphaseFiniteDifferenceImageFilter.h
include/ITK-%%ITK_VER%%/itkMultiphaseFiniteDifferenceImageFilter.hxx
include/ITK-%%ITK_VER%%/itkMultiphaseSparseFiniteDifferenceImageFilter.h
include/ITK-%%ITK_VER%%/itkMultiphaseSparseFiniteDifferenceImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkMultipleImageIterator.h
include/ITK-%%ITK_VER%%/itkMultipleLogOutput.h
include/ITK-%%ITK_VER%%/itkMultipleValuedCostFunction.h
include/ITK-%%ITK_VER%%/itkMultipleValuedNonLinearOptimizer.h
@@ -1932,6 +2216,10 @@ include/ITK-%%ITK_VER%%/itkMutualInformationImageToImageMetric.hxx
include/ITK-%%ITK_VER%%/itkMvtSunf.h
include/ITK-%%ITK_VER%%/itkN4BiasFieldCorrectionImageFilter.h
include/ITK-%%ITK_VER%%/itkN4BiasFieldCorrectionImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkNMinimaMaximaImageCalculator.h
+include/ITK-%%ITK_VER%%/itkNMinimaMaximaImageCalculator.hxx
+include/ITK-%%ITK_VER%%/itkNPasteImageFilter.h
+include/ITK-%%ITK_VER%%/itkNPasteImageFilter.hxx
include/ITK-%%ITK_VER%%/itkNarrowBand.h
include/ITK-%%ITK_VER%%/itkNarrowBand.hxx
include/ITK-%%ITK_VER%%/itkNarrowBandCurvesLevelSetImageFilter.h
@@ -1979,6 +2267,8 @@ include/ITK-%%ITK_VER%%/itkNoiseBaseImageFilter.hxx
include/ITK-%%ITK_VER%%/itkNoiseImageFilter.h
include/ITK-%%ITK_VER%%/itkNoiseImageFilter.hxx
include/ITK-%%ITK_VER%%/itkNonLinearOptimizer.h
+include/ITK-%%ITK_VER%%/itkNonLocalPatchBasedImageFilter.h
+include/ITK-%%ITK_VER%%/itkNonLocalPatchBasedImageFilter.hxx
include/ITK-%%ITK_VER%%/itkNormalQuadEdgeMeshFilter.h
include/ITK-%%ITK_VER%%/itkNormalQuadEdgeMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkNormalVariateGenerator.h
@@ -1996,6 +2286,8 @@ include/ITK-%%ITK_VER%%/itkNormalizedCorrelationImageToImageMetric.h
include/ITK-%%ITK_VER%%/itkNormalizedCorrelationImageToImageMetric.hxx
include/ITK-%%ITK_VER%%/itkNormalizedCorrelationPointSetToImageMetric.h
include/ITK-%%ITK_VER%%/itkNormalizedCorrelationPointSetToImageMetric.hxx
+include/ITK-%%ITK_VER%%/itkNormalizedCorrelationTwoImageToOneImageMetric.h
+include/ITK-%%ITK_VER%%/itkNormalizedCorrelationTwoImageToOneImageMetric.hxx
include/ITK-%%ITK_VER%%/itkNormalizedMutualInformationHistogramImageToImageMetric.h
include/ITK-%%ITK_VER%%/itkNormalizedMutualInformationHistogramImageToImageMetric.hxx
include/ITK-%%ITK_VER%%/itkNotImageFilter.h
@@ -2039,6 +2331,8 @@ include/ITK-%%ITK_VER%%/itkObjectToObjectMetricBase.hxx
include/ITK-%%ITK_VER%%/itkObjectToObjectMultiMetricv4.h
include/ITK-%%ITK_VER%%/itkObjectToObjectMultiMetricv4.hxx
include/ITK-%%ITK_VER%%/itkObjectToObjectOptimizerBase.h
+include/ITK-%%ITK_VER%%/itkObjectnessMeasureImageFilter.h
+include/ITK-%%ITK_VER%%/itkObjectnessMeasureImageFilter.hxx
include/ITK-%%ITK_VER%%/itkOctree.h
include/ITK-%%ITK_VER%%/itkOctree.hxx
include/ITK-%%ITK_VER%%/itkOctreeNode.h
@@ -2086,6 +2380,17 @@ include/ITK-%%ITK_VER%%/itkPadImageFilterBase.h
include/ITK-%%ITK_VER%%/itkPadImageFilterBase.hxx
include/ITK-%%ITK_VER%%/itkPadLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkPadLabelMapFilter.hxx
+include/ITK-%%ITK_VER%%/itkParabolicCloseImageFilter.h
+include/ITK-%%ITK_VER%%/itkParabolicDilateImageFilter.h
+include/ITK-%%ITK_VER%%/itkParabolicErodeDilateImageFilter.h
+include/ITK-%%ITK_VER%%/itkParabolicErodeDilateImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkParabolicErodeImageFilter.h
+include/ITK-%%ITK_VER%%/itkParabolicMorphUtils.h
+include/ITK-%%ITK_VER%%/itkParabolicOpenCloseImageFilter.h
+include/ITK-%%ITK_VER%%/itkParabolicOpenCloseImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkParabolicOpenCloseSafeBorderImageFilter.h
+include/ITK-%%ITK_VER%%/itkParabolicOpenCloseSafeBorderImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkParabolicOpenImageFilter.h
include/ITK-%%ITK_VER%%/itkParallelSparseFieldLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkParallelSparseFieldLevelSetImageFilter.hxx
include/ITK-%%ITK_VER%%/itkParameterizationQuadEdgeMeshFilter.h
@@ -2127,8 +2432,18 @@ include/ITK-%%ITK_VER%%/itkPeriodicBoundaryCondition.h
include/ITK-%%ITK_VER%%/itkPeriodicBoundaryCondition.hxx
include/ITK-%%ITK_VER%%/itkPermuteAxesImageFilter.h
include/ITK-%%ITK_VER%%/itkPermuteAxesImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkPhaseCorrelationImageRegistrationMethod.h
+include/ITK-%%ITK_VER%%/itkPhaseCorrelationImageRegistrationMethod.hxx
+include/ITK-%%ITK_VER%%/itkPhaseCorrelationOperator.h
+include/ITK-%%ITK_VER%%/itkPhaseCorrelationOperator.hxx
+include/ITK-%%ITK_VER%%/itkPhaseCorrelationOptimizer.h
+include/ITK-%%ITK_VER%%/itkPhaseCorrelationOptimizer.hxx
+include/ITK-%%ITK_VER%%/itkPhaseSymmetryImageFilter.h
+include/ITK-%%ITK_VER%%/itkPhaseSymmetryImageFilter.hxx
include/ITK-%%ITK_VER%%/itkPhasedArray3DSpecialCoordinatesImage.h
include/ITK-%%ITK_VER%%/itkPhasedArray3DSpecialCoordinatesImage.hxx
+include/ITK-%%ITK_VER%%/itkPhysicalCentralDifferenceImageFunction.h
+include/ITK-%%ITK_VER%%/itkPhysicalCentralDifferenceImageFunction.hxx
include/ITK-%%ITK_VER%%/itkPhysicalPointImageSource.h
include/ITK-%%ITK_VER%%/itkPhysicalPointImageSource.hxx
include/ITK-%%ITK_VER%%/itkPipelineMonitorImageFilter.h
@@ -2164,6 +2479,14 @@ include/ITK-%%ITK_VER%%/itkPointSetToSpatialObjectDemonsRegistration.h
include/ITK-%%ITK_VER%%/itkPointSetToSpatialObjectDemonsRegistration.hxx
include/ITK-%%ITK_VER%%/itkPointsLocator.h
include/ITK-%%ITK_VER%%/itkPointsLocator.hxx
+include/ITK-%%ITK_VER%%/itkPolarToCartesianTransform.h
+include/ITK-%%ITK_VER%%/itkPolarToCartesianTransform.hxx
+include/ITK-%%ITK_VER%%/itkPolyData.h
+include/ITK-%%ITK_VER%%/itkPolyData.hxx
+include/ITK-%%ITK_VER%%/itkPolyDataToMeshFilter.h
+include/ITK-%%ITK_VER%%/itkPolyDataToMeshFilter.hxx
+include/ITK-%%ITK_VER%%/itkPolyLineCell.h
+include/ITK-%%ITK_VER%%/itkPolyLineCell.hxx
include/ITK-%%ITK_VER%%/itkPolyLineParametricPath.h
include/ITK-%%ITK_VER%%/itkPolyLineParametricPath.hxx
include/ITK-%%ITK_VER%%/itkPolygonCell.h
@@ -2268,6 +2591,16 @@ include/ITK-%%ITK_VER%%/itkRGBToLuminanceImageAdaptor.h
include/ITK-%%ITK_VER%%/itkRGBToLuminanceImageFilter.h
include/ITK-%%ITK_VER%%/itkRGBToVectorImageAdaptor.h
include/ITK-%%ITK_VER%%/itkRGBToVectorPixelAccessor.h
+include/ITK-%%ITK_VER%%/itkRLEImage.h
+include/ITK-%%ITK_VER%%/itkRLEImage.hxx
+include/ITK-%%ITK_VER%%/itkRLEImageConstIterator.h
+include/ITK-%%ITK_VER%%/itkRLEImageIterator.h
+include/ITK-%%ITK_VER%%/itkRLEImageRegionConstIterator.h
+include/ITK-%%ITK_VER%%/itkRLEImageRegionIterator.h
+include/ITK-%%ITK_VER%%/itkRLEImageScanlineConstIterator.h
+include/ITK-%%ITK_VER%%/itkRLEImageScanlineIterator.h
+include/ITK-%%ITK_VER%%/itkRLERegionOfInterestImageFilter.h
+include/ITK-%%ITK_VER%%/itkRLERegionOfInterestImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRandomImageSource.h
include/ITK-%%ITK_VER%%/itkRandomImageSource.hxx
include/ITK-%%ITK_VER%%/itkRandomVariateGeneratorBase.h
@@ -2290,6 +2623,8 @@ include/ITK-%%ITK_VER%%/itkReconstructionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRectangularImageNeighborhoodShape.h
include/ITK-%%ITK_VER%%/itkRecursiveGaussianImageFilter.h
include/ITK-%%ITK_VER%%/itkRecursiveGaussianImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkRecursiveLineYvvGaussianImageFilter.h
+include/ITK-%%ITK_VER%%/itkRecursiveLineYvvGaussianImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRecursiveMultiResolutionPyramidImageFilter.h
include/ITK-%%ITK_VER%%/itkRecursiveMultiResolutionPyramidImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRecursiveSeparableImageFilter.h
@@ -2307,12 +2642,16 @@ include/ITK-%%ITK_VER%%/itkRegionBasedLevelSetFunction.hxx
include/ITK-%%ITK_VER%%/itkRegionBasedLevelSetFunctionData.h
include/ITK-%%ITK_VER%%/itkRegionBasedLevelSetFunctionData.hxx
include/ITK-%%ITK_VER%%/itkRegionBasedLevelSetFunctionSharedData.h
+include/ITK-%%ITK_VER%%/itkRegionCompetitionImageFilter.h
+include/ITK-%%ITK_VER%%/itkRegionCompetitionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRegionConstrainedSubsampler.h
include/ITK-%%ITK_VER%%/itkRegionConstrainedSubsampler.hxx
include/ITK-%%ITK_VER%%/itkRegionFromReferenceLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkRegionFromReferenceLabelMapFilter.hxx
include/ITK-%%ITK_VER%%/itkRegionGrowImageFilter.h
include/ITK-%%ITK_VER%%/itkRegionGrowImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkRegionGrowingSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkRegionGrowingSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkRegionOfInterestImageFilter.h
include/ITK-%%ITK_VER%%/itkRegionOfInterestImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRegionalMaximaImageFilter.h
@@ -2346,6 +2685,8 @@ include/ITK-%%ITK_VER%%/itkRelabelLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkRenyiEntropyThresholdCalculator.h
include/ITK-%%ITK_VER%%/itkRenyiEntropyThresholdCalculator.hxx
include/ITK-%%ITK_VER%%/itkRenyiEntropyThresholdImageFilter.h
+include/ITK-%%ITK_VER%%/itkReplaceFeatureMapNanInfImageFilter.h
+include/ITK-%%ITK_VER%%/itkReplaceFeatureMapNanInfImageFilter.hxx
include/ITK-%%ITK_VER%%/itkResampleImageFilter.h
include/ITK-%%ITK_VER%%/itkResampleImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRescaleIntensityImageFilter.h
@@ -2369,6 +2710,8 @@ include/ITK-%%ITK_VER%%/itkRobustAutomaticThresholdCalculator.hxx
include/ITK-%%ITK_VER%%/itkRobustAutomaticThresholdImageFilter.h
include/ITK-%%ITK_VER%%/itkRobustAutomaticThresholdImageFilter.hxx
include/ITK-%%ITK_VER%%/itkRoundImageFilter.h
+include/ITK-%%ITK_VER%%/itkRunLengthTextureFeaturesImageFilter.h
+include/ITK-%%ITK_VER%%/itkRunLengthTextureFeaturesImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSLICImageFilter.h
include/ITK-%%ITK_VER%%/itkSLICImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSPSAOptimizer.h
@@ -2376,6 +2719,10 @@ include/ITK-%%ITK_VER%%/itkSTAPLEImageFilter.h
include/ITK-%%ITK_VER%%/itkSTAPLEImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSTLConstContainerAdaptor.h
include/ITK-%%ITK_VER%%/itkSTLContainerAdaptor.h
+include/ITK-%%ITK_VER%%/itkSTLMeshIO.h
+include/ITK-%%ITK_VER%%/itkSTLMeshIOFactory.h
+include/ITK-%%ITK_VER%%/itkSWCMeshIO.h
+include/ITK-%%ITK_VER%%/itkSWCMeshIOFactory.h
include/ITK-%%ITK_VER%%/itkSaltAndPepperNoiseImageFilter.h
include/ITK-%%ITK_VER%%/itkSaltAndPepperNoiseImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSample.h
@@ -2385,6 +2732,12 @@ include/ITK-%%ITK_VER%%/itkSampleToHistogramFilter.h
include/ITK-%%ITK_VER%%/itkSampleToHistogramFilter.hxx
include/ITK-%%ITK_VER%%/itkSampleToSubsampleFilter.h
include/ITK-%%ITK_VER%%/itkSampleToSubsampleFilter.hxx
+include/ITK-%%ITK_VER%%/itkSatoLocalStructureFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkSatoLocalStructureFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkSatoVesselnessFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkSatoVesselnessFeatureGenerator.hxx
+include/ITK-%%ITK_VER%%/itkSatoVesselnessSigmoidFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkSatoVesselnessSigmoidFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkScalableAffineTransform.h
include/ITK-%%ITK_VER%%/itkScalableAffineTransform.hxx
include/ITK-%%ITK_VER%%/itkScalarAnisotropicDiffusionFunction.h
@@ -2425,15 +2778,23 @@ include/ITK-%%ITK_VER%%/itkScaleTransform.h
include/ITK-%%ITK_VER%%/itkScaleTransform.hxx
include/ITK-%%ITK_VER%%/itkScaleVersor3DTransform.h
include/ITK-%%ITK_VER%%/itkScaleVersor3DTransform.hxx
+include/ITK-%%ITK_VER%%/itkScancoImageIO.h
+include/ITK-%%ITK_VER%%/itkScancoImageIOFactory.h
include/ITK-%%ITK_VER%%/itkScanlineFilterCommon.h
include/ITK-%%ITK_VER%%/itkScatterMatrixImageFunction.h
include/ITK-%%ITK_VER%%/itkScatterMatrixImageFunction.hxx
+include/ITK-%%ITK_VER%%/itkSegmentBonesInMicroCTFilter.h
+include/ITK-%%ITK_VER%%/itkSegmentBonesInMicroCTFilter.hxx
include/ITK-%%ITK_VER%%/itkSegmentationBorder.h
include/ITK-%%ITK_VER%%/itkSegmentationLevelSetFunction.h
include/ITK-%%ITK_VER%%/itkSegmentationLevelSetFunction.hxx
include/ITK-%%ITK_VER%%/itkSegmentationLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkSegmentationLevelSetImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkSegmentationRegion.h
+include/ITK-%%ITK_VER%%/itkSegmentationVolumeEstimator.h
+include/ITK-%%ITK_VER%%/itkSegmentationVolumeEstimator.hxx
include/ITK-%%ITK_VER%%/itkShanbhagThresholdCalculator.h
include/ITK-%%ITK_VER%%/itkShanbhagThresholdCalculator.hxx
include/ITK-%%ITK_VER%%/itkShanbhagThresholdImageFilter.h
@@ -2441,6 +2802,8 @@ include/ITK-%%ITK_VER%%/itkShapeDetectionLevelSetFunction.h
include/ITK-%%ITK_VER%%/itkShapeDetectionLevelSetFunction.hxx
include/ITK-%%ITK_VER%%/itkShapeDetectionLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkShapeDetectionLevelSetImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkShapeDetectionLevelSetSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkShapeDetectionLevelSetSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkShapeKeepNObjectsLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkShapeKeepNObjectsLabelMapFilter.hxx
include/ITK-%%ITK_VER%%/itkShapeLabelMapFilter.h
@@ -2476,6 +2839,7 @@ include/ITK-%%ITK_VER%%/itkShapedNeighborhoodIterator.h
include/ITK-%%ITK_VER%%/itkShapedNeighborhoodIterator.hxx
include/ITK-%%ITK_VER%%/itkSharedMorphologyUtilities.h
include/ITK-%%ITK_VER%%/itkSharedMorphologyUtilities.hxx
+include/ITK-%%ITK_VER%%/itkSharpenOpImageFilter.h
include/ITK-%%ITK_VER%%/itkShiSparseLevelSetImage.h
include/ITK-%%ITK_VER%%/itkShiSparseLevelSetImage.hxx
include/ITK-%%ITK_VER%%/itkShiftScaleImageFilter.h
@@ -2486,8 +2850,12 @@ include/ITK-%%ITK_VER%%/itkShotNoiseImageFilter.h
include/ITK-%%ITK_VER%%/itkShotNoiseImageFilter.hxx
include/ITK-%%ITK_VER%%/itkShrinkImageFilter.h
include/ITK-%%ITK_VER%%/itkShrinkImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkSiddonJacobsRayCastInterpolateImageFunction.h
+include/ITK-%%ITK_VER%%/itkSiddonJacobsRayCastInterpolateImageFunction.hxx
include/ITK-%%ITK_VER%%/itkSiemensVisionImageIO.h
include/ITK-%%ITK_VER%%/itkSiemensVisionImageIOFactory.h
+include/ITK-%%ITK_VER%%/itkSigmoidFeatureGenerator.h
+include/ITK-%%ITK_VER%%/itkSigmoidFeatureGenerator.hxx
include/ITK-%%ITK_VER%%/itkSigmoidImageFilter.h
include/ITK-%%ITK_VER%%/itkSignedDanielssonDistanceMapImageFilter.h
include/ITK-%%ITK_VER%%/itkSignedDanielssonDistanceMapImageFilter.hxx
@@ -2518,6 +2886,10 @@ include/ITK-%%ITK_VER%%/itkSinImageAdaptor.h
include/ITK-%%ITK_VER%%/itkSinImageFilter.h
include/ITK-%%ITK_VER%%/itkSinRegularizedHeavisideStepFunction.h
include/ITK-%%ITK_VER%%/itkSinRegularizedHeavisideStepFunction.hxx
+include/ITK-%%ITK_VER%%/itkSingleImageCostFunction.h
+include/ITK-%%ITK_VER%%/itkSingleImageCostFunction.hxx
+include/ITK-%%ITK_VER%%/itkSinglePhaseLevelSetSegmentationModule.h
+include/ITK-%%ITK_VER%%/itkSinglePhaseLevelSetSegmentationModule.hxx
include/ITK-%%ITK_VER%%/itkSingleValuedCostFunction.h
include/ITK-%%ITK_VER%%/itkSingleValuedCostFunctionv4.h
include/ITK-%%ITK_VER%%/itkSingleValuedNonLinearOptimizer.h
@@ -2527,6 +2899,10 @@ include/ITK-%%ITK_VER%%/itkSingleValuedVnlCostFunctionAdaptor.h
include/ITK-%%ITK_VER%%/itkSingleValuedVnlCostFunctionAdaptorv4.h
include/ITK-%%ITK_VER%%/itkSingleton.h
include/ITK-%%ITK_VER%%/itkSingletonMacro.h
+include/ITK-%%ITK_VER%%/itkSinusoidImageSource.h
+include/ITK-%%ITK_VER%%/itkSinusoidImageSource.hxx
+include/ITK-%%ITK_VER%%/itkSinusoidSpatialFunction.h
+include/ITK-%%ITK_VER%%/itkSinusoidSpatialFunction.hxx
include/ITK-%%ITK_VER%%/itkSize.h
include/ITK-%%ITK_VER%%/itkSliceBySliceImageFilter.h
include/ITK-%%ITK_VER%%/itkSliceBySliceImageFilter.hxx
@@ -2541,6 +2917,8 @@ include/ITK-%%ITK_VER%%/itkSmoothingQuadEdgeMeshFilter.h
include/ITK-%%ITK_VER%%/itkSmoothingQuadEdgeMeshFilter.hxx
include/ITK-%%ITK_VER%%/itkSmoothingRecursiveGaussianImageFilter.h
include/ITK-%%ITK_VER%%/itkSmoothingRecursiveGaussianImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkSmoothingRecursiveYvvGaussianImageFilter.h
+include/ITK-%%ITK_VER%%/itkSmoothingRecursiveYvvGaussianImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSobelEdgeDetectionImageFilter.h
include/ITK-%%ITK_VER%%/itkSobelEdgeDetectionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSobelOperator.h
@@ -2586,12 +2964,18 @@ include/ITK-%%ITK_VER%%/itkSpecialCoordinatesImage.h
include/ITK-%%ITK_VER%%/itkSpecialCoordinatesImage.hxx
include/ITK-%%ITK_VER%%/itkSpeckleNoiseImageFilter.h
include/ITK-%%ITK_VER%%/itkSpeckleNoiseImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkSpeedFunctionPathInformation.h
+include/ITK-%%ITK_VER%%/itkSpeedFunctionPathInformation.hxx
+include/ITK-%%ITK_VER%%/itkSpeedFunctionToPathFilter.h
+include/ITK-%%ITK_VER%%/itkSpeedFunctionToPathFilter.hxx
include/ITK-%%ITK_VER%%/itkSphereMeshSource.h
include/ITK-%%ITK_VER%%/itkSphereMeshSource.hxx
include/ITK-%%ITK_VER%%/itkSphereSignedDistanceFunction.h
include/ITK-%%ITK_VER%%/itkSphereSignedDistanceFunction.hxx
include/ITK-%%ITK_VER%%/itkSphereSpatialFunction.h
include/ITK-%%ITK_VER%%/itkSphereSpatialFunction.hxx
+include/ITK-%%ITK_VER%%/itkSplitComponentsImageFilter.h
+include/ITK-%%ITK_VER%%/itkSplitComponentsImageFilter.hxx
include/ITK-%%ITK_VER%%/itkSpringColormapFunction.h
include/ITK-%%ITK_VER%%/itkSpringColormapFunction.hxx
include/ITK-%%ITK_VER%%/itkSqrtImageAdaptor.h
@@ -2626,17 +3010,23 @@ include/ITK-%%ITK_VER%%/itkStatisticsUniqueLabelMapFilter.h
include/ITK-%%ITK_VER%%/itkStatisticsUniqueLabelMapFilter.hxx
include/ITK-%%ITK_VER%%/itkStdStreamLogOutput.h
include/ITK-%%ITK_VER%%/itkStdStreamStateSave.h
+include/ITK-%%ITK_VER%%/itkSteerableFilterFreqImageSource.h
+include/ITK-%%ITK_VER%%/itkSteerableFilterFreqImageSource.hxx
include/ITK-%%ITK_VER%%/itkStimulateImageIO.h
include/ITK-%%ITK_VER%%/itkStimulateImageIOFactory.h
include/ITK-%%ITK_VER%%/itkStochasticFractalDimensionImageFilter.h
include/ITK-%%ITK_VER%%/itkStochasticFractalDimensionImageFilter.hxx
include/ITK-%%ITK_VER%%/itkStoppingCriterionBase.h
+include/ITK-%%ITK_VER%%/itkStrainImageFilter.h
+include/ITK-%%ITK_VER%%/itkStrainImageFilter.hxx
include/ITK-%%ITK_VER%%/itkStreamingImageFilter.h
include/ITK-%%ITK_VER%%/itkStreamingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkStreamingImageIOBase.h
include/ITK-%%ITK_VER%%/itkStreamingProcessObject.h
include/ITK-%%ITK_VER%%/itkStringTools.h
include/ITK-%%ITK_VER%%/itkStringTools.hxx
+include/ITK-%%ITK_VER%%/itkStripTsImageFilter.h
+include/ITK-%%ITK_VER%%/itkStripTsImageFilter.hxx
include/ITK-%%ITK_VER%%/itkStructHashFunction.h
include/ITK-%%ITK_VER%%/itkSubsample.h
include/ITK-%%ITK_VER%%/itkSubsample.hxx
@@ -2687,7 +3077,7 @@ include/ITK-%%ITK_VER%%/itkTernaryOperatorImageFilter.h
include/ITK-%%ITK_VER%%/itkTestDriverAfterTest.inc
include/ITK-%%ITK_VER%%/itkTestDriverBeforeTest.inc
include/ITK-%%ITK_VER%%/itkTestDriverInclude.h
-include/ITK-%%ITK_VER%%/itkTestDriverIncludeBuiltInIOFactories.h
+include/ITK-%%ITK_VER%%/itkTestDriverIncludeRequiredFactories.h
include/ITK-%%ITK_VER%%/itkTestDriverIncludeRequiredIOFactories.h
include/ITK-%%ITK_VER%%/itkTestingComparisonImageFilter.h
include/ITK-%%ITK_VER%%/itkTestingComparisonImageFilter.hxx
@@ -2727,8 +3117,13 @@ include/ITK-%%ITK_VER%%/itkThresholdSegmentationLevelSetImageFilter.h
include/ITK-%%ITK_VER%%/itkThresholdSegmentationLevelSetImageFilter.hxx
include/ITK-%%ITK_VER%%/itkTikhonovDeconvolutionImageFilter.h
include/ITK-%%ITK_VER%%/itkTikhonovDeconvolutionImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkTileConfiguration.h
include/ITK-%%ITK_VER%%/itkTileImageFilter.h
include/ITK-%%ITK_VER%%/itkTileImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkTileMergeImageFilter.h
+include/ITK-%%ITK_VER%%/itkTileMergeImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkTileMontage.h
+include/ITK-%%ITK_VER%%/itkTileMontage.hxx
include/ITK-%%ITK_VER%%/itkTimeProbe.h
include/ITK-%%ITK_VER%%/itkTimeProbesCollectorBase.h
include/ITK-%%ITK_VER%%/itkTimeStamp.h
@@ -2758,6 +3153,8 @@ include/ITK-%%ITK_VER%%/itkTransformFactory.h
include/ITK-%%ITK_VER%%/itkTransformFactoryBase.h
include/ITK-%%ITK_VER%%/itkTransformFileReader.h
include/ITK-%%ITK_VER%%/itkTransformFileWriter.h
+include/ITK-%%ITK_VER%%/itkTransformGeometryImageFilter.h
+include/ITK-%%ITK_VER%%/itkTransformGeometryImageFilter.hxx
include/ITK-%%ITK_VER%%/itkTransformIOBase.h
include/ITK-%%ITK_VER%%/itkTransformIOFactory.h
include/ITK-%%ITK_VER%%/itkTransformMeshFilter.h
@@ -2766,6 +3163,8 @@ include/ITK-%%ITK_VER%%/itkTransformParametersAdaptor.h
include/ITK-%%ITK_VER%%/itkTransformParametersAdaptorBase.h
include/ITK-%%ITK_VER%%/itkTransformToDisplacementFieldFilter.h
include/ITK-%%ITK_VER%%/itkTransformToDisplacementFieldFilter.hxx
+include/ITK-%%ITK_VER%%/itkTransformToStrainFilter.h
+include/ITK-%%ITK_VER%%/itkTransformToStrainFilter.hxx
include/ITK-%%ITK_VER%%/itkTranslationTransform.h
include/ITK-%%ITK_VER%%/itkTranslationTransform.hxx
include/ITK-%%ITK_VER%%/itkTriangleCell.h
@@ -2773,6 +3172,8 @@ include/ITK-%%ITK_VER%%/itkTriangleCell.hxx
include/ITK-%%ITK_VER%%/itkTriangleCellTopology.h
include/ITK-%%ITK_VER%%/itkTriangleHelper.h
include/ITK-%%ITK_VER%%/itkTriangleHelper.hxx
+include/ITK-%%ITK_VER%%/itkTriangleMeshCurvatureCalculator.h
+include/ITK-%%ITK_VER%%/itkTriangleMeshCurvatureCalculator.hxx
include/ITK-%%ITK_VER%%/itkTriangleMeshToBinaryImageFilter.h
include/ITK-%%ITK_VER%%/itkTriangleMeshToBinaryImageFilter.hxx
include/ITK-%%ITK_VER%%/itkTriangleMeshToSimplexMeshFilter.h
@@ -2784,6 +3185,10 @@ include/ITK-%%ITK_VER%%/itkTubeSpatialObject.h
include/ITK-%%ITK_VER%%/itkTubeSpatialObject.hxx
include/ITK-%%ITK_VER%%/itkTubeSpatialObjectPoint.h
include/ITK-%%ITK_VER%%/itkTubeSpatialObjectPoint.hxx
+include/ITK-%%ITK_VER%%/itkTwoImageToOneImageMetric.h
+include/ITK-%%ITK_VER%%/itkTwoImageToOneImageMetric.hxx
+include/ITK-%%ITK_VER%%/itkTwoProjectionImageRegistrationMethod.h
+include/ITK-%%ITK_VER%%/itkTwoProjectionImageRegistrationMethod.hxx
include/ITK-%%ITK_VER%%/itkTxtTransformIO.h
include/ITK-%%ITK_VER%%/itkTxtTransformIOFactory.h
include/ITK-%%ITK_VER%%/itkUnaryCorrespondenceMatrix.h
@@ -2813,6 +3218,8 @@ include/ITK-%%ITK_VER%%/itkVTKImageIO.h
include/ITK-%%ITK_VER%%/itkVTKImageIOFactory.h
include/ITK-%%ITK_VER%%/itkVTKImageImport.h
include/ITK-%%ITK_VER%%/itkVTKImageImport.hxx
+include/ITK-%%ITK_VER%%/itkVTKImageToImageFilter.h
+include/ITK-%%ITK_VER%%/itkVTKImageToImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVTKPolyDataMeshIO.h
include/ITK-%%ITK_VER%%/itkVTKPolyDataMeshIOFactory.h
include/ITK-%%ITK_VER%%/itkVTKPolyDataReader.h
@@ -2834,8 +3241,42 @@ include/ITK-%%ITK_VER%%/itkVariableLengthVector.h
include/ITK-%%ITK_VER%%/itkVariableLengthVector.hxx
include/ITK-%%ITK_VER%%/itkVariableSizeMatrix.h
include/ITK-%%ITK_VER%%/itkVariableSizeMatrix.hxx
+include/ITK-%%ITK_VER%%/itkVarianceImageFilter.h
+include/ITK-%%ITK_VER%%/itkVarianceImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVarianceImageFunction.h
include/ITK-%%ITK_VER%%/itkVarianceImageFunction.hxx
+include/ITK-%%ITK_VER%%/itkVariationalDiffeomorphicRegistrationFilter.h
+include/ITK-%%ITK_VER%%/itkVariationalDiffeomorphicRegistrationFilter.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationCurvatureRegularizer.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationCurvatureRegularizer.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationDemonsFunction.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationDemonsFunction.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationDiffusionRegularizer.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationDiffusionRegularizer.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationElasticRegularizer.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationElasticRegularizer.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationFastNCCFunction.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationFastNCCFunction.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationFilter.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationFilter.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationFunction.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationFunction.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationGaussianRegularizer.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationGaussianRegularizer.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationLogger.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationLogger.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationMultiResolutionFilter.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationMultiResolutionFilter.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationNCCFunction.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationNCCFunction.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationRegularizer.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationRegularizer.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationSSDFunction.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationSSDFunction.hxx
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationStopCriterion.h
+include/ITK-%%ITK_VER%%/itkVariationalRegistrationStopCriterion.hxx
+include/ITK-%%ITK_VER%%/itkVariationalSymmetricDiffeomorphicRegistrationFilter.h
+include/ITK-%%ITK_VER%%/itkVariationalSymmetricDiffeomorphicRegistrationFilter.hxx
include/ITK-%%ITK_VER%%/itkVector.h
include/ITK-%%ITK_VER%%/itkVector.hxx
include/ITK-%%ITK_VER%%/itkVectorAnisotropicDiffusionFunction.h
@@ -2852,6 +3293,8 @@ include/ITK-%%ITK_VER%%/itkVectorCurvatureNDAnisotropicDiffusionFunction.h
include/ITK-%%ITK_VER%%/itkVectorCurvatureNDAnisotropicDiffusionFunction.hxx
include/ITK-%%ITK_VER%%/itkVectorExpandImageFilter.h
include/ITK-%%ITK_VER%%/itkVectorExpandImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkVectorFieldPCA.h
+include/ITK-%%ITK_VER%%/itkVectorFieldPCA.hxx
include/ITK-%%ITK_VER%%/itkVectorGradientAnisotropicDiffusionImageFilter.h
include/ITK-%%ITK_VER%%/itkVectorGradientMagnitudeImageFilter.h
include/ITK-%%ITK_VER%%/itkVectorGradientMagnitudeImageFilter.hxx
@@ -2897,6 +3340,8 @@ include/ITK-%%ITK_VER%%/itkVersorTransform.hxx
include/ITK-%%ITK_VER%%/itkVersorTransformOptimizer.h
include/ITK-%%ITK_VER%%/itkVertexCell.h
include/ITK-%%ITK_VER%%/itkVertexCell.hxx
+include/ITK-%%ITK_VER%%/itkVesselEnhancingDiffusion3DImageFilter.h
+include/ITK-%%ITK_VER%%/itkVesselEnhancingDiffusion3DImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVideoFileReader.h
include/ITK-%%ITK_VER%%/itkVideoFileReader.hxx
include/ITK-%%ITK_VER%%/itkVideoFileWriter.h
@@ -2909,14 +3354,23 @@ include/ITK-%%ITK_VER%%/itkVideoStream.h
include/ITK-%%ITK_VER%%/itkVideoStream.hxx
include/ITK-%%ITK_VER%%/itkVideoToVideoFilter.h
include/ITK-%%ITK_VER%%/itkVideoToVideoFilter.hxx
+include/ITK-%%ITK_VER%%/itkViewImage.h
+include/ITK-%%ITK_VER%%/itkViewImage.hxx
+include/ITK-%%ITK_VER%%/itkVnlComplexToComplex1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkVnlComplexToComplex1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVnlComplexToComplexFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkVnlComplexToComplexFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVnlFFTCommon.h
include/ITK-%%ITK_VER%%/itkVnlFFTCommon.hxx
+include/ITK-%%ITK_VER%%/itkVnlFFTImageFilterInitFactory.h
+include/ITK-%%ITK_VER%%/itkVnlForward1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkVnlForward1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVnlForwardFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkVnlForwardFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVnlHalfHermitianToRealInverseFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkVnlHalfHermitianToRealInverseFFTImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkVnlInverse1DFFTImageFilter.h
+include/ITK-%%ITK_VER%%/itkVnlInverse1DFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVnlInverseFFTImageFilter.h
include/ITK-%%ITK_VER%%/itkVnlInverseFFTImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVnlRealToHalfHermitianForwardFFTImageFilter.h
@@ -2935,6 +3389,8 @@ include/ITK-%%ITK_VER%%/itkVoronoiSegmentationImageFilterBase.h
include/ITK-%%ITK_VER%%/itkVoronoiSegmentationImageFilterBase.hxx
include/ITK-%%ITK_VER%%/itkVoronoiSegmentationRGBImageFilter.h
include/ITK-%%ITK_VER%%/itkVoronoiSegmentationRGBImageFilter.hxx
+include/ITK-%%ITK_VER%%/itkVotingBinaryHoleFillFloodingImageFilter.h
+include/ITK-%%ITK_VER%%/itkVotingBinaryHoleFillFloodingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVotingBinaryHoleFillingImageFilter.h
include/ITK-%%ITK_VER%%/itkVotingBinaryHoleFillingImageFilter.hxx
include/ITK-%%ITK_VER%%/itkVotingBinaryImageFilter.h
@@ -2978,6 +3434,8 @@ include/ITK-%%ITK_VER%%/itkWeightedCovarianceSampleFilter.h
include/ITK-%%ITK_VER%%/itkWeightedCovarianceSampleFilter.hxx
include/ITK-%%ITK_VER%%/itkWeightedMeanSampleFilter.h
include/ITK-%%ITK_VER%%/itkWeightedMeanSampleFilter.hxx
+include/ITK-%%ITK_VER%%/itkWeightedSumFeatureAggregator.h
+include/ITK-%%ITK_VER%%/itkWeightedSumFeatureAggregator.hxx
include/ITK-%%ITK_VER%%/itkWhitakerSparseLevelSetImage.h
include/ITK-%%ITK_VER%%/itkWhitakerSparseLevelSetImage.hxx
include/ITK-%%ITK_VER%%/itkWhiteTopHatImageFilter.h
@@ -3013,11 +3471,9 @@ include/ITK-%%ITK_VER%%/itkZeroFluxNeumannPadImageFilter.h
include/ITK-%%ITK_VER%%/itkZeroFluxNeumannPadImageFilter.hxx
include/ITK-%%ITK_VER%%/itk_H5Cpp.h
include/ITK-%%ITK_VER%%/itk_NrrdIO_mangle.h
-include/ITK-%%ITK_VER%%/itk_compiler_detection.h
include/ITK-%%ITK_VER%%/itk_eigen.h
include/ITK-%%ITK_VER%%/itk_hdf5.h
include/ITK-%%ITK_VER%%/itk_jpeg.h
-include/ITK-%%ITK_VER%%/itk_kwiml.h
include/ITK-%%ITK_VER%%/itk_minc2.h
include/ITK-%%ITK_VER%%/itk_openjpeg.h
include/ITK-%%ITK_VER%%/itk_png.h
@@ -3055,6 +3511,7 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Cholesky/LDLT.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Cholesky/LLT.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Cholesky/LLT_LAPACKE.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/CholmodSupport/CholmodSupport.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/ArithmeticSequence.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Array.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/ArrayBase.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/ArrayWrapper.h
@@ -3087,6 +3544,7 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/GeneralProduct.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/GenericPacketMath.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/GlobalFunctions.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/IO.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/IndexedView.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Inverse.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Map.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/MapBase.h
@@ -3097,6 +3555,7 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/MatrixBase.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/NestByValue.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/NoAlias.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/NumTraits.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/PartialReduxEvaluator.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/PermutationMatrix.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/PlainObjectBase.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Product.h
@@ -3105,6 +3564,7 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Random.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Redux.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Ref.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Replicate.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Reshaped.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/ReturnByValue.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Reverse.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Select.h
@@ -3114,6 +3574,7 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Solve.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/SolveTriangular.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/SolverBase.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/StableNorm.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/StlIterators.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Stride.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Swap.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/Transpose.h
@@ -3126,26 +3587,48 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX/Complex.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX/MathFunctions.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX/PacketMath.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX/TypeCasting.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX512/Complex.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX512/MathFunctions.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX512/PacketMath.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AVX512/TypeCasting.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AltiVec/Complex.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AltiVec/MathFunctions.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/AltiVec/PacketMath.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/CUDA/Complex.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/CUDA/Half.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/CUDA/MathFunctions.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/CUDA/PacketMath.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/CUDA/PacketMathHalf.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/CUDA/TypeCasting.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/BFloat16.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/ConjHelper.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/Half.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/Settings.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/Default/TypeCasting.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/GPU/MathFunctions.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/GPU/PacketMath.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/GPU/TypeCasting.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/HIP/hcc/math_constants.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/MSA/Complex.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/MSA/MathFunctions.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/MSA/PacketMath.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/NEON/Complex.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/NEON/MathFunctions.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/NEON/PacketMath.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/NEON/TypeCasting.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SSE/Complex.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SSE/MathFunctions.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SSE/PacketMath.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SSE/TypeCasting.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SVE/MathFunctions.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SVE/PacketMath.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SVE/TypeCasting.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SYCL/InteropHeaders.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SYCL/MathFunctions.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SYCL/PacketMath.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/SYCL/TypeCasting.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/ZVector/Complex.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/ZVector/MathFunctions.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/arch/ZVector/PacketMath.h
@@ -3177,16 +3660,21 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/products/TriangularSolverMatrix.
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/products/TriangularSolverVector.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/BlasUtil.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/ConfigureVectorization.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/Constants.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/DisableStupidWarnings.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/ForwardDeclarations.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/IndexedViewHelper.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/IntegralConstant.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/MKL_support.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/Macros.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/Memory.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/Meta.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/NonMPL2.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/ReenableStupidWarnings.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/ReshapedHelper.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/StaticAssert.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/SymbolicIndex.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Core/util/XprHelper.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Eigenvalues/ComplexEigenSolver.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Eigenvalues/ComplexSchur.h
@@ -3216,7 +3704,7 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Geometry/Scaling.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Geometry/Transform.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Geometry/Translation.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Geometry/Umeyama.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Geometry/arch/Geometry_SSE.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Geometry/arch/Geometry_SIMD.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Householder/BlockHouseholder.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Householder/Householder.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Householder/HouseholderSequence.h
@@ -3229,12 +3717,13 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/IterativeLinearSolvers/IterativeSolve
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/Jacobi/Jacobi.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/KLUSupport/KLUSupport.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/Determinant.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/FullPivLU.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/InverseImpl.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/PartialPivLU.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/PartialPivLU_LAPACKE.h
-include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/arch/Inverse_SSE.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/LU/arch/InverseSize4.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/MetisSupport/MetisSupport.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/OrderingMethods/Amd.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/OrderingMethods/Eigen_Colamd.h
@@ -3321,11 +3810,12 @@ include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/ArrayCwiseUnaryOps.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/BlockMethods.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/CommonCwiseBinaryOps.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/CommonCwiseUnaryOps.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/IndexedViewMethods.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/MatrixCwiseBinaryOps.h
include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/MatrixCwiseUnaryOps.h
+include/ITK-%%ITK_VER%%/itkeigen/Eigen/src/plugins/ReshapedMethods.h
include/ITK-%%ITK_VER%%/itkfdstream/fdstream.hxx
-include/ITK-%%ITK_VER%%/itkkwiml/abi.h
-include/ITK-%%ITK_VER%%/itkkwiml/int.h
+include/ITK-%%ITK_VER%%/itkinstance.h
include/ITK-%%ITK_VER%%/itkminc2/ParseArgv.h
include/ITK-%%ITK_VER%%/itkminc2/minc2.h
include/ITK-%%ITK_VER%%/itkminc2/minc2_api.h
@@ -3368,6 +3858,7 @@ include/ITK-%%ITK_VER%%/itksys/MD5.h
include/ITK-%%ITK_VER%%/itksys/Process.h
include/ITK-%%ITK_VER%%/itksys/RegularExpression.hxx
include/ITK-%%ITK_VER%%/itksys/SharedForward.h
+include/ITK-%%ITK_VER%%/itksys/Status.hxx
include/ITK-%%ITK_VER%%/itksys/String.hxx
include/ITK-%%ITK_VER%%/itksys/System.h
include/ITK-%%ITK_VER%%/itksys/SystemInformation.hxx
@@ -3585,12 +4076,415 @@ include/ITK-%%ITK_VER%%/minpack/qrsolv.h
include/ITK-%%ITK_VER%%/napack/cg.h
include/ITK-%%ITK_VER%%/nifti1.h
include/ITK-%%ITK_VER%%/nifti1_io.h
-include/ITK-%%ITK_VER%%/nifti1_tool.h
include/ITK-%%ITK_VER%%/openjpeg.h
include/ITK-%%ITK_VER%%/openjpegDllConfig.h
include/ITK-%%ITK_VER%%/openjpeg_mangle.h
include/ITK-%%ITK_VER%%/opt/lbfgs.h
include/ITK-%%ITK_VER%%/opt/lbfgsb.h
+include/ITK-%%ITK_VER%%/rtkADMMTotalVariationConeBeamReconstructionFilter.h
+include/ITK-%%ITK_VER%%/rtkADMMTotalVariationConeBeamReconstructionFilter.hxx
+include/ITK-%%ITK_VER%%/rtkADMMTotalVariationConjugateGradientOperator.h
+include/ITK-%%ITK_VER%%/rtkADMMTotalVariationConjugateGradientOperator.hxx
+include/ITK-%%ITK_VER%%/rtkADMMWaveletsConeBeamReconstructionFilter.h
+include/ITK-%%ITK_VER%%/rtkADMMWaveletsConeBeamReconstructionFilter.hxx
+include/ITK-%%ITK_VER%%/rtkADMMWaveletsConjugateGradientOperator.h
+include/ITK-%%ITK_VER%%/rtkADMMWaveletsConjugateGradientOperator.hxx
+include/ITK-%%ITK_VER%%/rtkAddMatrixAndDiagonalImageFilter.h
+include/ITK-%%ITK_VER%%/rtkAddMatrixAndDiagonalImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkAdditiveGaussianNoiseImageFilter.h
+include/ITK-%%ITK_VER%%/rtkAdditiveGaussianNoiseImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkAmsterdamShroudImageFilter.h
+include/ITK-%%ITK_VER%%/rtkAmsterdamShroudImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkAverageOutOfROIImageFilter.h
+include/ITK-%%ITK_VER%%/rtkAverageOutOfROIImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkBackProjectionImageFilter.h
+include/ITK-%%ITK_VER%%/rtkBackProjectionImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkBackwardDifferenceDivergenceImageFilter.h
+include/ITK-%%ITK_VER%%/rtkBackwardDifferenceDivergenceImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkBioscanGeometryReader.h
+include/ITK-%%ITK_VER%%/rtkBlockDiagonalMatrixVectorMultiplyImageFilter.h
+include/ITK-%%ITK_VER%%/rtkBlockDiagonalMatrixVectorMultiplyImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkBoellaardScatterCorrectionImageFilter.h
+include/ITK-%%ITK_VER%%/rtkBoellaardScatterCorrectionImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkBoxShape.h
+include/ITK-%%ITK_VER%%/rtkConditionalMedianImageFilter.h
+include/ITK-%%ITK_VER%%/rtkConditionalMedianImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkConfiguration.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientConeBeamReconstructionFilter.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientConeBeamReconstructionFilter.hxx
+include/ITK-%%ITK_VER%%/rtkConjugateGradientGetP_kPlusOneImageFilter.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientGetP_kPlusOneImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkConjugateGradientGetR_kPlusOneImageFilter.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientGetR_kPlusOneImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkConjugateGradientGetX_kPlusOneImageFilter.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientGetX_kPlusOneImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkConjugateGradientImageFilter.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkConjugateGradientOperator.h
+include/ITK-%%ITK_VER%%/rtkConjugateGradientOperator.hxx
+include/ITK-%%ITK_VER%%/rtkConstantImageSource.h
+include/ITK-%%ITK_VER%%/rtkConstantImageSource.hxx
+include/ITK-%%ITK_VER%%/rtkConvexShape.h
+include/ITK-%%ITK_VER%%/rtkCudaAverageOutOfROIImageFilter.h
+include/ITK-%%ITK_VER%%/rtkCudaAverageOutOfROIImageFilter.hcu
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+include/ITK-%%ITK_VER%%/rtkSplatWithKnownWeightsImageFilter.h
+include/ITK-%%ITK_VER%%/rtkSplatWithKnownWeightsImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkSubSelectFromListImageFilter.h
+include/ITK-%%ITK_VER%%/rtkSubSelectFromListImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkSubSelectImageFilter.h
+include/ITK-%%ITK_VER%%/rtkSubSelectImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkSumOfSquaresImageFilter.h
+include/ITK-%%ITK_VER%%/rtkSumOfSquaresImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkThreeDCircularProjectionGeometry.h
+include/ITK-%%ITK_VER%%/rtkThreeDCircularProjectionGeometryXMLFile.h
+include/ITK-%%ITK_VER%%/rtkThreeDCircularProjectionGeometryXMLFileReader.h
+include/ITK-%%ITK_VER%%/rtkThreeDCircularProjectionGeometryXMLFileWriter.h
+include/ITK-%%ITK_VER%%/rtkTotalNuclearVariationDenoisingBPDQImageFilter.h
+include/ITK-%%ITK_VER%%/rtkTotalNuclearVariationDenoisingBPDQImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkTotalVariationDenoiseSequenceImageFilter.h
+include/ITK-%%ITK_VER%%/rtkTotalVariationDenoiseSequenceImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkTotalVariationDenoisingBPDQImageFilter.h
+include/ITK-%%ITK_VER%%/rtkTotalVariationDenoisingBPDQImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkTotalVariationImageFilter.h
+include/ITK-%%ITK_VER%%/rtkTotalVariationImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkUnwarpSequenceConjugateGradientOperator.h
+include/ITK-%%ITK_VER%%/rtkUnwarpSequenceConjugateGradientOperator.hxx
+include/ITK-%%ITK_VER%%/rtkUnwarpSequenceImageFilter.h
+include/ITK-%%ITK_VER%%/rtkUnwarpSequenceImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkUpsampleImageFilter.h
+include/ITK-%%ITK_VER%%/rtkUpsampleImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkVarianObiGeometryReader.h
+include/ITK-%%ITK_VER%%/rtkVarianObiRawImageFilter.h
+include/ITK-%%ITK_VER%%/rtkVarianObiRawImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkVarianObiXMLFileReader.h
+include/ITK-%%ITK_VER%%/rtkVarianProBeamGeometryReader.h
+include/ITK-%%ITK_VER%%/rtkVarianProBeamXMLFileReader.h
+include/ITK-%%ITK_VER%%/rtkVectorImageToImageFilter.h
+include/ITK-%%ITK_VER%%/rtkVectorImageToImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkWarpFourDToProjectionStackImageFilter.h
+include/ITK-%%ITK_VER%%/rtkWarpFourDToProjectionStackImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkWarpProjectionStackToFourDImageFilter.h
+include/ITK-%%ITK_VER%%/rtkWarpProjectionStackToFourDImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkWarpSequenceImageFilter.h
+include/ITK-%%ITK_VER%%/rtkWarpSequenceImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkWatcherForResourceProbe.h
+include/ITK-%%ITK_VER%%/rtkWaterPrecorrectionImageFilter.h
+include/ITK-%%ITK_VER%%/rtkWaterPrecorrectionImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkWeidingerForwardModelImageFilter.h
+include/ITK-%%ITK_VER%%/rtkWeidingerForwardModelImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkXRadGeometryReader.h
+include/ITK-%%ITK_VER%%/rtkXRadImageIO.h
+include/ITK-%%ITK_VER%%/rtkXRadImageIOFactory.h
+include/ITK-%%ITK_VER%%/rtkXRadRawToAttenuationImageFilter.h
+include/ITK-%%ITK_VER%%/rtkXRadRawToAttenuationImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkXimImageIO.h
+include/ITK-%%ITK_VER%%/rtkXimImageIOFactory.h
+include/ITK-%%ITK_VER%%/rtkZengBackProjectionImageFilter.h
+include/ITK-%%ITK_VER%%/rtkZengBackProjectionImageFilter.hxx
+include/ITK-%%ITK_VER%%/rtkZengForwardProjectionImageFilter.h
+include/ITK-%%ITK_VER%%/rtkZengForwardProjectionImageFilter.hxx
include/ITK-%%ITK_VER%%/sparse/spConfig.h
include/ITK-%%ITK_VER%%/sparse/spDefs.h
include/ITK-%%ITK_VER%%/sparse/spMatrix.h
@@ -3896,18 +4790,61 @@ include/ITK-%%ITK_VER%%/vnl/vnl_vector_fixed.hxx
include/ITK-%%ITK_VER%%/vnl/vnl_vector_fixed_ref.h
include/ITK-%%ITK_VER%%/vnl/vnl_vector_fixed_ref.hxx
include/ITK-%%ITK_VER%%/vnl/vnl_vector_ref.h
+include/ITK-%%ITK_VER%%/vtkCaptureScreen.h
include/ITK-%%ITK_VER%%/vxl_config.h
include/ITK-%%ITK_VER%%/vxl_copyright.h
include/ITK-%%ITK_VER%%/vxl_version.h
include/ITK-%%ITK_VER%%/znzlib.h
+include/RTK/lpsolve/lp_Hash.h
+include/RTK/lpsolve/lp_MDO.h
+include/RTK/lpsolve/lp_MPS.h
+include/RTK/lpsolve/lp_SOS.h
+include/RTK/lpsolve/lp_bit.h
+include/RTK/lpsolve/lp_crash.h
+include/RTK/lpsolve/lp_explicit.h
+include/RTK/lpsolve/lp_fortify.h
+include/RTK/lpsolve/lp_lib.h
+include/RTK/lpsolve/lp_matrix.h
+include/RTK/lpsolve/lp_mipbb.h
+include/RTK/lpsolve/lp_presolve.h
+include/RTK/lpsolve/lp_price.h
+include/RTK/lpsolve/lp_pricePSE.h
+include/RTK/lpsolve/lp_report.h
+include/RTK/lpsolve/lp_rlp.h
+include/RTK/lpsolve/lp_scale.h
+include/RTK/lpsolve/lp_simplex.h
+include/RTK/lpsolve/lp_solveDLL.h
+include/RTK/lpsolve/lp_types.h
+include/RTK/lpsolve/lp_utils.h
+include/RTK/lpsolve/lp_wlp.h
+lib/cmake/ITK-%%ITK_VER%%/FindGengetopt.cmake
+lib/cmake/ITK-%%ITK_VER%%/GetGitRevisionDescription.cmake
+lib/cmake/ITK-%%ITK_VER%%/GetGitRevisionDescription.cmake.in
lib/cmake/ITK-%%ITK_VER%%/ITKConfig.cmake
lib/cmake/ITK-%%ITK_VER%%/ITKConfigVersion.cmake
+lib/cmake/ITK-%%ITK_VER%%/ITKFactoryRegistration.cmake
+lib/cmake/ITK-%%ITK_VER%%/ITKInitializeCXXStandard.cmake
lib/cmake/ITK-%%ITK_VER%%/ITKModuleAPI.cmake
lib/cmake/ITK-%%ITK_VER%%/ITKTargets-%%CMAKE_BUILD_TYPE%%.cmake
lib/cmake/ITK-%%ITK_VER%%/ITKTargets.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/AdaptiveDenoising.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/BSplineGradient.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/BoneEnhancement.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/BoneMorphometry.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/Cuberille.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/Eigen3Config.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/Eigen3ConfigVersion.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/Eigen3Targets.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/FixedPointInverseDisplacementField.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/GenericLabelInterpolator.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/GrowCut.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/HASI.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/HigherOrderAccurateGradient.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/IOFDF.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/IOMeshSTL.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/IOMeshSWC.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/IOScanco.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/IOTransformDCMTK.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKAnisotropicSmoothing.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKAntiAlias.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKBiasCorrection.cmake
@@ -3918,6 +4855,7 @@ lib/cmake/ITK-%%ITK_VER%%/Modules/ITKCommon.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKConnectedComponents.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKConvolution.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKCurvatureFlow.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/ITKDCMTK.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKDICOMParser.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKDeconvolution.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKDeformableMesh.cmake
@@ -4004,7 +4942,6 @@ lib/cmake/ITK-%%ITK_VER%%/Modules/ITKInternalEigen3ConfigVersion.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKInternalEigen3Targets.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKJPEG.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKKLMRegionGrowing.cmake
-lib/cmake/ITK-%%ITK_VER%%/Modules/ITKKWIML.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKKWSys.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKLIBLBFGS.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKLabelMap.cmake
@@ -4052,9 +4989,35 @@ lib/cmake/ITK-%%ITK_VER%%/Modules/ITKVideoCore.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKVideoFiltering.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKVideoIO.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKVoronoi.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/ITKVtkGlue.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKWatersheds.cmake
lib/cmake/ITK-%%ITK_VER%%/Modules/ITKZLIB.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/LabelErodeDilate.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/LesionSizingToolkit.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/MeshNoise.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/MeshToPolyData.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/MinimalPathExtraction.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/Montage.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/MorphologicalContourInterpolation.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/MultipleImageIterator.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/ParabolicMorphology.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/PhaseSymmetry.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/PolarTransform.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/PrincipalComponentsAnalysis.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/RLEImage.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/RTK.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/Shape.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/SimpleITKFilters.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/SkullStrip.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/SmoothingRecursiveYvvGaussianFilter.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/SplitComponents.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/Strain.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/TextureFeatures.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/Thickness3D.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/TwoProjectionRegistration.cmake
+lib/cmake/ITK-%%ITK_VER%%/Modules/VariationalRegistration.cmake
lib/cmake/ITK-%%ITK_VER%%/UseITK.cmake
+lib/cmake/ITK-%%ITK_VER%%/itkFFTImageFilterInitFactoryRegisterManager.h.in
lib/cmake/ITK-%%ITK_VER%%/itkImageIOFactoryRegisterManager.h.in
lib/cmake/ITK-%%ITK_VER%%/itkMeshIOFactoryRegisterManager.h.in
lib/cmake/ITK-%%ITK_VER%%/itkTransformIOFactoryRegisterManager.h.in
@@ -4212,6 +5175,8 @@ lib/libITKVideoCore-%%ITK_VER%%.so
lib/libITKVideoCore-%%ITK_VER%%.so.1
lib/libITKVideoIO-%%ITK_VER%%.so
lib/libITKVideoIO-%%ITK_VER%%.so.1
+lib/libITKVtkGlue-%%ITK_VER%%.so
+lib/libITKVtkGlue-%%ITK_VER%%.so.1
lib/libITKWatersheds-%%ITK_VER%%.so
lib/libITKWatersheds-%%ITK_VER%%.so.1
lib/libITKgiftiio-%%ITK_VER%%.so
@@ -4220,8 +5185,30 @@ lib/libITKniftiio-%%ITK_VER%%.so
lib/libITKniftiio-%%ITK_VER%%.so.1
lib/libITKznz-%%ITK_VER%%.so
lib/libITKznz-%%ITK_VER%%.so.1
+lib/libitkAdaptiveDenoising-%%ITK_VER%%.so
+lib/libitkAdaptiveDenoising-%%ITK_VER%%.so.1
+lib/libitkGrowCut-%%ITK_VER%%.so
+lib/libitkGrowCut-%%ITK_VER%%.so.1
+lib/libitkIOFDF-%%ITK_VER%%.so
+lib/libitkIOFDF-%%ITK_VER%%.so.1
+lib/libitkIOMeshSTL-%%ITK_VER%%.so
+lib/libitkIOMeshSTL-%%ITK_VER%%.so.1
+lib/libitkIOMeshSWC-%%ITK_VER%%.so
+lib/libitkIOMeshSWC-%%ITK_VER%%.so.1
+lib/libitkIOScanco-%%ITK_VER%%.so
+lib/libitkIOScanco-%%ITK_VER%%.so.1
+lib/libitkIOTransformDCMTK-%%ITK_VER%%.so
+lib/libitkIOTransformDCMTK-%%ITK_VER%%.so.1
+lib/libitkMinimalPathExtraction-%%ITK_VER%%.so
+lib/libitkMinimalPathExtraction-%%ITK_VER%%.so.1
+lib/libitkMontage-%%ITK_VER%%.so
+lib/libitkMontage-%%ITK_VER%%.so.1
lib/libitkNetlibSlatec-%%ITK_VER%%.so
lib/libitkNetlibSlatec-%%ITK_VER%%.so.1
+lib/libitkRTK-%%ITK_VER%%.so
+lib/libitkRTK-%%ITK_VER%%.so.1
+lib/libitkSimpleITKFilters-%%ITK_VER%%.so
+lib/libitkSimpleITKFilters-%%ITK_VER%%.so.1
lib/libitkdouble-conversion-%%ITK_VER%%.so
lib/libitkdouble-conversion-%%ITK_VER%%.so.1
lib/libitklbfgs-%%ITK_VER%%.so
@@ -4242,7 +5229,10 @@ lib/libitkvnl-%%ITK_VER%%.so
lib/libitkvnl-%%ITK_VER%%.so.1
lib/libitkvnl_algo-%%ITK_VER%%.so
lib/libitkvnl_algo-%%ITK_VER%%.so.1
-share/doc/ITK-%%ITK_VER%%/LICENSE
-share/doc/ITK-%%ITK_VER%%/NOTICE
-share/doc/ITK-%%ITK_VER%%/README.md
-share/doc/ITK-%%ITK_VER%%/itksys/Copyright.txt
+lib/liblpsolve55.so
+lib/liblpsolve55.so.5
+lib/liblpsolve55.so.5.5.2
+lib/rtkelektasynergygeometry.py
+lib/rtkorageometry.py
+lib/rtksimulatedgeometry.py
+lib/rtkvarianobigeometry.py