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| author | Jason W. Bacon <jwb@FreeBSD.org> | 2019-05-13 16:23:35 +0000 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2019-05-13 16:23:35 +0000 |
| commit | 3cdd6aac74dca51c45a6119aa5a128db1195cb45 (patch) | |
| tree | 5baa57603b6567eeb1745c79e4f1efbd0c23c7b8 /biology/jellyfish/Makefile | |
| parent | f45fede8d4a1cc9819204323297b689481f52198 (diff) | |
| download | ports-3cdd6aac74dca51c45a6119aa5a128db1195cb45.tar.gz ports-3cdd6aac74dca51c45a6119aa5a128db1195cb45.zip | |
biology/jellyfish: Upgrade to 2.2.10, patch for powerpc64
PR: 237868
Submitted by: pkubaj
Notes
Notes:
svn path=/head/; revision=501578
Diffstat (limited to 'biology/jellyfish/Makefile')
| -rw-r--r-- | biology/jellyfish/Makefile | 26 |
1 files changed, 17 insertions, 9 deletions
diff --git a/biology/jellyfish/Makefile b/biology/jellyfish/Makefile index 305ea6b3fb80..684a3b2143aa 100644 --- a/biology/jellyfish/Makefile +++ b/biology/jellyfish/Makefile @@ -1,10 +1,10 @@ # $FreeBSD$ -PORTNAME= jellyfish -PORTVERSION= 2.2.6 +PORTNAME= Jellyfish DISTVERSIONPREFIX= v -PORTREVISION= 4 -CATEGORIES= biology +DISTVERSION= 2.2.10 +PORTREVISION= 5 +CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= Fast, memory-efficient counting of k-mers in DNA @@ -13,20 +13,24 @@ LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= yaggo:devel/yaggo - -GNU_CONFIGURE= yes +LIB_DEPENDS= libhts.so:biology/htslib USES= autoreconf compiler:c++11-lib gmake libtool pathfix pkgconfig USE_LDCONFIG= yes - USE_GITHUB= yes + +GNU_CONFIGURE= yes GH_ACCOUNT= gmarcais -GH_PROJECT= Jellyfish INSTALL_TARGET= install-strip - PLIST_SUB= VER=${PORTVERSION} +OPTIONS_DEFINE= NLS +OPTIONS_SUB= yes + +NLS_USES= gettext +NLS_CONFIGURE_ENABLE= nls + .include <bsd.port.pre.mk> # SSE code assumes amd64 features @@ -34,4 +38,8 @@ PLIST_SUB= VER=${PORTVERSION} CONFIGURE_ARGS+=--without-sse .endif +.if ${CHOSEN_COMPILER_TYPE} == gcc +CXXFLAGS+= -faligned-new +.endif + .include <bsd.port.post.mk> |