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authorJason W. Bacon <jwb@FreeBSD.org>2022-02-03 19:37:21 +0000
committerJason W. Bacon <jwb@FreeBSD.org>2022-02-03 19:38:42 +0000
commitd936c94c64a84e88f8c9fbe350aa0445fda80a06 (patch)
tree4d8c93059db6cf1fba1cc7812423ce4d887e47d6 /biology/py-bcbio-gff
parentae84243f743832495d405957f312df764b5367e2 (diff)
downloadports-d936c94c64a84e88f8c9fbe350aa0445fda80a06.tar.gz
ports-d936c94c64a84e88f8c9fbe350aa0445fda80a06.zip
biology/py-bcbio-gff: Read and write Generic Feature Format (GFF)
Read and write Generic Feature Format (GFF) with Biopython integration. Also adding py-dna-features-viewer to Makefile, missed on last commit
Diffstat (limited to 'biology/py-bcbio-gff')
-rw-r--r--biology/py-bcbio-gff/Makefile16
-rw-r--r--biology/py-bcbio-gff/distinfo3
-rw-r--r--biology/py-bcbio-gff/pkg-descr3
3 files changed, 22 insertions, 0 deletions
diff --git a/biology/py-bcbio-gff/Makefile b/biology/py-bcbio-gff/Makefile
new file mode 100644
index 000000000000..b08f6d36f7f2
--- /dev/null
+++ b/biology/py-bcbio-gff/Makefile
@@ -0,0 +1,16 @@
+PORTNAME= bcbio-gff
+DISTVERSION= 0.6.9
+CATEGORIES= biology python
+MASTER_SITES= CHEESESHOP
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER= jwb@FreeBSD.org
+COMMENT= Read and write Generic Feature Format (GFF) with Biopython integration
+
+LICENSE= BSD3CLAUSE
+LICENSE_FILE= ${WRKSRC}/LICENSE
+
+USES= python
+USE_PYTHON= autoplist distutils
+
+.include <bsd.port.mk>
diff --git a/biology/py-bcbio-gff/distinfo b/biology/py-bcbio-gff/distinfo
new file mode 100644
index 000000000000..72637728bd5c
--- /dev/null
+++ b/biology/py-bcbio-gff/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1643900022
+SHA256 (bcbio-gff-0.6.9.tar.gz) = 34dfa970e14f4533dc63c0a5512b7b5221e4a06449e6aaa344162ed5fdd7a1de
+SIZE (bcbio-gff-0.6.9.tar.gz) = 44236
diff --git a/biology/py-bcbio-gff/pkg-descr b/biology/py-bcbio-gff/pkg-descr
new file mode 100644
index 000000000000..2eec0e8e52a5
--- /dev/null
+++ b/biology/py-bcbio-gff/pkg-descr
@@ -0,0 +1,3 @@
+Read and write Generic Feature Format (GFF) with Biopython integration.
+
+WWW: https://pypi.python.org/project/bcbio-gff/