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authorAntoine Brodin <antoine@FreeBSD.org>2021-10-13 18:57:58 +0000
committerAntoine Brodin <antoine@FreeBSD.org>2021-10-13 18:57:58 +0000
commit6a226290f3c82253f50151496168e5d1d1bb13c0 (patch)
tree1a4fec4405cc90e9fb22b0878b9826521608bf21 /biology/py-pybigwig
parent7f0abe4909dd55b69f522f2595e0f784f53e54fd (diff)
downloadports-6a226290f3c82253f50151496168e5d1d1bb13c0.tar.gz
ports-6a226290f3c82253f50151496168e5d1d1bb13c0.zip
biology/py-pybigwig: remove, duplicate of biology/py-bigwig
Diffstat (limited to 'biology/py-pybigwig')
-rw-r--r--biology/py-pybigwig/Makefile22
-rw-r--r--biology/py-pybigwig/distinfo3
-rw-r--r--biology/py-pybigwig/files/patch-setup.py11
-rw-r--r--biology/py-pybigwig/pkg-descr5
4 files changed, 0 insertions, 41 deletions
diff --git a/biology/py-pybigwig/Makefile b/biology/py-pybigwig/Makefile
deleted file mode 100644
index 4ec67e50a3c3..000000000000
--- a/biology/py-pybigwig/Makefile
+++ /dev/null
@@ -1,22 +0,0 @@
-PORTNAME= pyBigWig
-DISTVERSION= 0.3.18
-PORTREVISION= 1
-CATEGORIES= biology python
-MASTER_SITES= CHEESESHOP
-PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
-
-MAINTAINER= jwb@FreeBSD.org
-COMMENT= Python access to bigWig files using libBigWig
-
-LICENSE= MIT
-LICENSE_FILE= ${WRKSRC}/LICENSE.txt
-
-LIB_DEPENDS= libcurl.so:ftp/curl
-
-USES= localbase python
-USE_PYTHON= autoplist distutils
-
-post-install:
- @${STRIP_CMD} ${STAGEDIR}${PYTHON_SITELIBDIR}/pyBigWig.cpython-38.so
-
-.include <bsd.port.mk>
diff --git a/biology/py-pybigwig/distinfo b/biology/py-pybigwig/distinfo
deleted file mode 100644
index 35e26a9f88d0..000000000000
--- a/biology/py-pybigwig/distinfo
+++ /dev/null
@@ -1,3 +0,0 @@
-TIMESTAMP = 1617288519
-SHA256 (pyBigWig-0.3.18.tar.gz) = 4c2a8c571b4100ad7c4c318c142eb48558646be52aaab28215a70426f5be31bc
-SIZE (pyBigWig-0.3.18.tar.gz) = 64834
diff --git a/biology/py-pybigwig/files/patch-setup.py b/biology/py-pybigwig/files/patch-setup.py
deleted file mode 100644
index 30a4bc936ca3..000000000000
--- a/biology/py-pybigwig/files/patch-setup.py
+++ /dev/null
@@ -1,11 +0,0 @@
---- setup.py.orig 2021-10-13 13:55:13 UTC
-+++ setup.py
-@@ -69,7 +69,7 @@ setup(name = 'pyBigWig',
- url = "https://github.com/dpryan79/pyBigWig",
- download_url = "https://github.com/dpryan79/pyBigWig/tarball/0.3.13",
- keywords = ["bioinformatics", "bigWig", "bigBed"],
-- classifier = ["Development Status :: 5 - Production/Stable",
-+ classifiers = ["Development Status :: 5 - Production/Stable",
- "Intended Audience :: Developers",
- "License :: OSI Approved",
- "Programming Language :: C",
diff --git a/biology/py-pybigwig/pkg-descr b/biology/py-pybigwig/pkg-descr
deleted file mode 100644
index 111f72f80af6..000000000000
--- a/biology/py-pybigwig/pkg-descr
+++ /dev/null
@@ -1,5 +0,0 @@
-py-bigwig is a python extension, written in C, for quick access to
-bigBed files and access to and creation of bigWig files. This extension
-uses libBigWig for local and remote file access.
-
-WWW: https://github.com/deeptools/pyBigWig