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authorYuri Victorovich <yuri@FreeBSD.org>2022-12-25 11:00:03 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2022-12-25 11:00:41 +0000
commit0ab73b4e27012ac29a3543695181d9a398d8e942 (patch)
tree9aec324a9d70389b25c394bdfd1b679ad2c78de3 /science
parenta3f880d8ce81d59bc90450384f4b70ee1b4ae98e (diff)
downloadports-0ab73b4e27012ac29a3543695181d9a398d8e942.tar.gz
ports-0ab73b4e27012ac29a3543695181d9a398d8e942.zip
science/{,py-}gemmi: Update 0.5.7 -> 0.5.8
Reported by: portscout
Diffstat (limited to 'science')
-rw-r--r--science/gemmi/Makefile2
-rw-r--r--science/gemmi/distinfo6
-rw-r--r--science/gemmi/pkg-plist2
-rw-r--r--science/py-gemmi/Makefile8
-rw-r--r--science/py-gemmi/distinfo6
5 files changed, 14 insertions, 10 deletions
diff --git a/science/gemmi/Makefile b/science/gemmi/Makefile
index 6a74bf21a478..18f0c34d2ae4 100644
--- a/science/gemmi/Makefile
+++ b/science/gemmi/Makefile
@@ -1,6 +1,6 @@
PORTNAME= gemmi
DISTVERSIONPREFIX= v
-DISTVERSION= 0.5.7
+DISTVERSION= 0.5.8
CATEGORIES= science # chemistry
MAINTAINER= yuri@FreeBSD.org
diff --git a/science/gemmi/distinfo b/science/gemmi/distinfo
index dc0844f594ee..ac2fb5d3d8f5 100644
--- a/science/gemmi/distinfo
+++ b/science/gemmi/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1664834213
-SHA256 (project-gemmi-gemmi-v0.5.7_GH0.tar.gz) = dede98c52920dac4a86dd77f38daa20bc8a1449ce16833815f5b563f4e8384a0
-SIZE (project-gemmi-gemmi-v0.5.7_GH0.tar.gz) = 1677695
+TIMESTAMP = 1671963605
+SHA256 (project-gemmi-gemmi-v0.5.8_GH0.tar.gz) = b67c8f79d85c4fd6766ce5b0418c79f4cb54a62d9091de6d0a7c20bb6060070e
+SIZE (project-gemmi-gemmi-v0.5.8_GH0.tar.gz) = 1695293
diff --git a/science/gemmi/pkg-plist b/science/gemmi/pkg-plist
index df1ef9df2ca2..369eb6e118c3 100644
--- a/science/gemmi/pkg-plist
+++ b/science/gemmi/pkg-plist
@@ -46,6 +46,7 @@ include/gemmi/merge.hpp
include/gemmi/metadata.hpp
include/gemmi/mmcif.hpp
include/gemmi/mmcif_impl.hpp
+include/gemmi/mmdb.hpp
include/gemmi/mmread.hpp
include/gemmi/model.hpp
include/gemmi/modify.hpp
@@ -220,7 +221,6 @@ include/gemmi/to_chemcomp.hpp
include/gemmi/to_cif.hpp
include/gemmi/to_json.hpp
include/gemmi/to_mmcif.hpp
-include/gemmi/to_mmdb.hpp
include/gemmi/to_pdb.hpp
include/gemmi/topo.hpp
include/gemmi/twin.hpp
diff --git a/science/py-gemmi/Makefile b/science/py-gemmi/Makefile
index 0e82aca8092b..3c1a4fb91ca0 100644
--- a/science/py-gemmi/Makefile
+++ b/science/py-gemmi/Makefile
@@ -1,6 +1,6 @@
PORTNAME= gemmi
DISTVERSIONPREFIX= v
-DISTVERSION= 0.5.7
+DISTVERSION= 0.5.8
CATEGORIES= science python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -15,6 +15,7 @@ BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pip>0:devel/py-pip@${PY_FLAVOR} \
pybind11>=2.6:devel/pybind11
USES= cmake compiler:c++17-lang python
+USE_PYTHON= flavors
USE_GITHUB= yes
GH_ACCOUNT= project-gemmi
@@ -23,7 +24,10 @@ CMAKE_ON= USE_PYTHON
PLIST_FILES= ${PYTHON_SITELIBDIR}/gemmi${PYTHON_EXT_SUFFIX}.so
+TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
+TEST_WRKSRC= ${BUILD_WRKSRC}/tests
+
do-test:
- @cd ${WRKSRC} && ${PYTHON_CMD} -m unittest discover -v tests/
+ @cd ${WRKSRC} && ${SETENV} ${TEST_ENV} ${PYTHON_CMD} -m unittest discover -v tests/
.include <bsd.port.mk>
diff --git a/science/py-gemmi/distinfo b/science/py-gemmi/distinfo
index dc0844f594ee..4a694c3cbfd2 100644
--- a/science/py-gemmi/distinfo
+++ b/science/py-gemmi/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1664834213
-SHA256 (project-gemmi-gemmi-v0.5.7_GH0.tar.gz) = dede98c52920dac4a86dd77f38daa20bc8a1449ce16833815f5b563f4e8384a0
-SIZE (project-gemmi-gemmi-v0.5.7_GH0.tar.gz) = 1677695
+TIMESTAMP = 1671964416
+SHA256 (project-gemmi-gemmi-v0.5.8_GH0.tar.gz) = b67c8f79d85c4fd6766ce5b0418c79f4cb54a62d9091de6d0a7c20bb6060070e
+SIZE (project-gemmi-gemmi-v0.5.8_GH0.tar.gz) = 1695293