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-rw-r--r--biology/hisat2/files/patch-aligner__sw.h17
1 files changed, 17 insertions, 0 deletions
diff --git a/biology/hisat2/files/patch-aligner__sw.h b/biology/hisat2/files/patch-aligner__sw.h
new file mode 100644
index 000000000000..24a24028ee6c
--- /dev/null
+++ b/biology/hisat2/files/patch-aligner__sw.h
@@ -0,0 +1,17 @@
+--- aligner_sw.h.orig 2020-07-24 20:07:54 UTC
++++ aligner_sw.h
+@@ -66,11 +66,13 @@
+
+ #define INLINE_CUPS
+
++#define SIMDE_ENABLE_NATIVE_ALIASES
++
++#include <simde/x86/sse2.h>
+ #include <stdint.h>
+ #include <iostream>
+ #include <limits>
+ #include "threading.h"
+-#include <emmintrin.h>
+ #include "aligner_sw_common.h"
+ #include "aligner_sw_nuc.h"
+ #include "ds.h"