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* biology/vsearch: Add patch for FreeBSD 16Jason W. Bacon2 days1-0/+32
* biology/vsearch: Update to 2.30.2Jason W. Bacon4 days2-4/+4
* *: WITH_DEBUG is a user feature not a port oneMathieu Arnold4 days1-1/+0
* biology/biostar-tools: Update to 2.1Jason W. Bacon4 days2-4/+2
* biology/R-cran-BiocManager: Update to 1.30.27Jason W. Bacon4 days2-4/+4
* biology/vcflib: update BUILD_DEPENDS to keep building with zig 0.14Rodrigo Osorio4 days1-1/+1
* biology/sra-tools: Update to 3.3.0Jason W. Bacon5 days4-6/+21
* lang/rust: Bump revisions after 1.92.0Mikael Urankar6 days1-1/+1
* many: Unpin Go portsDag-Erling Smørgrav7 days1-1/+1
* biology/iqtree: Update to 3.0.1Joseph Mingrone8 days2-10/+9
* biology/hyphy: Update to 2.5.90Joseph Mingrone8 days2-4/+4
* biology/hyphy: Update to 2.5.89Joseph Mingrone8 days2-4/+4
* biology/psi88: Fix building with FlangGleb Popov12 days1-2/+7
* biology/snpeff: Mark BROKEN and set expiration date to 2026-01-31Daniel Engberg2025-12-071-0/+3
* biology/hyphy: Update to 2.5.88Joseph Mingrone2025-12-073-28/+13
* various: Bump Go ports for 1.24.11Adam Weinberger2025-12-035-4/+5
* biology/diamond: Update to 2.1.16 and add test targetJoseph Mingrone2025-11-292-4/+6
* biology/seqkit: update 2.10.1 → 2.11.0Yuri Victorovich2025-11-252-9/+9
* biology/seqkit: update 2.10.0 → 2.10.1Yuri Victorovich2025-11-122-9/+8
* lang/rust: Bump revisions after 1.91.1Mikael Urankar2025-11-111-1/+1
* various: Bump Go ports for 1.24.10Adam Weinberger2025-11-065-5/+5
* biology/diamond: Update to 2.1.15Joseph Mingrone2025-11-052-4/+4
* biology/molden: Take maintainershipYuri Victorovich2025-11-051-1/+1
* biology/spoa: update 4.1.0 → 4.1.5Yuri Victorovich2025-11-053-5/+24
* biology/ncbi-cxx-toolkit: update 29.6.0 → 29.7.0Yuri Victorovich2025-11-042-5/+4
* biology/py-cutadapt: update to 5.2Philippe Audeoud2025-10-292-4/+4
* biology/py-dnaio: Update to 1.2.4Wen Heping2025-10-223-4/+22
* biology/haplohseq: fix build with Boost-1.89 (+)Dima Panov2025-10-221-0/+3
* biology/cufflinks: fix build with Boost-1.89 (+)Dima Panov2025-10-221-0/+2
* devel/boost: bump consumers after boost upgrade (+)Dima Panov2025-10-209-11/+13
* various: Bump go ports for go-1.24.9Adam Weinberger2025-10-145-5/+5
* biology/ncbi-cxx-toolkit: Remove archivers/bzip2 dependencyYuri Victorovich2025-10-141-2/+2
* biology/ncbi-cxx-toolkit: update 29.0.1 → 29.6.0Yuri Victorovich2025-10-132-7/+4
* biology/seqwish: Unbundle sdsl-lite and fix some clang19 compilation errorsYuri Victorovich2025-10-114-11/+125
* devel/sdsl-lite: update 2.1.1-137 → 2.3.1.v.20Yuri Victorovich2025-10-101-0/+1
* biology/viennarna: Unbundle dlib, use port dependency insteadYuri Victorovich2025-10-093-5/+72
* many: Bump dependent ports after go124 updateAdam Weinberger2025-10-085-5/+5
* biology/vsearch: Update to 2.30.1Jason W. Bacon2025-10-054-21/+21
* lang/rust: Bump revisions after 1.90.0Mikael Urankar2025-10-031-1/+1
* */*: switch dependency from devel/py-lxml5 to devel/py-lxmlHiroki Tagato2025-09-151-2/+2
* biology/diamond: Update to 2.1.14Joseph Mingrone2025-09-112-4/+4
* many: Bump go ports for go-1.24.7Adam Weinberger2025-09-045-5/+5
* biology/linux-foldingathome: Fix WRKSRC pathsMateusz Piotrowski2025-09-031-3/+3
* lang/rust: Bump revisions after 1.89.0Mikael Urankar2025-09-011-1/+1
* all: bump PORTREVISION after updating graphics/libyuvRene Ladan2025-08-3117-7/+17
* biology/seqan3: update 3.3.0 → 3.4.0Yuri Victorovich2025-08-284-132/+40
* biology/gatk: update 4.6.1.0 → 4.6.2.0Yuri Victorovich2025-08-273-12/+12
* biology/py-bx-python: update 0.13.0 → 0.14.0Yuri Victorovich2025-08-252-8/+14
* biology/gkl: update 0.8.11-9 → 0.9.1Yuri Victorovich2025-08-236-9/+30
* biology/hyphy: Fix build on i386Joseph Mingrone2025-08-221-0/+20
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