aboutsummaryrefslogtreecommitdiff
path: root/biology/fastx-toolkit
Commit message (Collapse)AuthorAgeFilesLines
* Update CONFLICTS definitions in categories a* to c*Stefan Eßer2022-02-061-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | Update the CONFLICTS definitions of ports in the following categories: - accessibility - archivers - audio - benchmarks - biology - cad - chinese - comms - converters An attempt has been made to use generic conflicts patterns that do not have to be updated whenever a new version of a conflicting port is added to the ports system. There is a misunderstanding that the port being built/installed has to be omitted from the conflicts pattern. This is not true - the port being built is implicitly non-conflicting due to logic in bsd.port.mk. Approved by: portmgr (implicit)
* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
| | | | Reported by: lwhsu
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
|
* biology/fastx-toolkit: Fix build on FreeBSD 12Jason W. Bacon2018-05-162-2/+19
| | | | | | | | Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D15451 Notes: svn path=/head/; revision=470124
* Multiple ports:Jason W. Bacon2018-01-311-2/+1
| | | | | | | | | | | Change maintainer email bacon4000@gmail.com to jwb@FreeBSD.org Remove Created by comments for same user Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D14128 Notes: svn path=/head/; revision=460452
* Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.Mathieu Arnold2016-04-011-1/+1
| | | | | | | | With hat: portmgr Sponsored by: Absolight Notes: svn path=/head/; revision=412344
* - Clarify LICENSEDmitry Marakasov2016-03-241-4/+3
| | | | | | | | | | | - Add LICENSE_FILE - Remove USES=tar:bzip2 (incorrect and no-op with USE_GITHUB) - Drop unneeded (and incorrect anyway) PKG_CONFIG_PATH Approved by: portmgr blanket Notes: svn path=/head/; revision=411790
* Always set the DEFAULT github DISTFILE with .tar.gz for EXTRACT_SUFX.Mathieu Arnold2016-03-081-2/+2
| | | | | | | | | | | | | | | Fix distinfo for the offending ports. lang/yorick's tag was moved, and the added patch was no longer needed. PR: 207644 Submitted by: mat Exp-run by by: antoine Sponsored by: Absolight Differential Revision: https://reviews.freebsd.org/D4268 Notes: svn path=/head/; revision=410613
* Cleanup GH_* and variables order.Mathieu Arnold2015-12-291-1/+0
| | | | | | | Sponsored by: Absolight Notes: svn path=/head/; revision=404743
* - Update maintainer mail addressMartin Wilke2015-12-111-2/+2
| | | | | | | | | | | | - Update/Remove MASTER_SITE PR: 204755 Submitted by: jwbacon@tds.net (maintainer) Approved by: mat (mentor) Differential Revision: D4493 Notes: svn path=/head/; revision=403506
* The FASTX-Toolkit is a collection of command line tools for Short-ReadsRuslan Makhmatkhanov2015-09-254-0/+56
FASTA/FASTQ files preprocessing. WWW: http://hannonlab.cshl.edu/fastx_toolkit/ PR: 203318 Submitted by: Jason Bacon <jwbacon@tds.net> Notes: svn path=/head/; revision=397847