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* */*: bump all consumers after recent boost upgradeDima Panov2022-08-121-1/+1
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* science/nest: remove redundant USES=compilerPiotr Kubaj2022-05-311-1/+1
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* devel/boost-all: bump all library consumers after boost upgradeDima Panov2022-05-221-0/+1
| | | | PR: 246106
* science/nest: Update 3.2 -> 3.3Yuri Victorovich2022-05-083-8/+10
| | | | Reported by: portscout
* science/nest: check for omp.h on all architecturesPiotr Kubaj2022-04-271-8/+6
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* science/nest: Update 3.1 -> 3.2Yuri Victorovich2022-01-275-181/+45
| | | | Reported by: portscout
* math/gsl: bump portrevision of consumers after update to 2.7.1Tobias C. Berner2022-01-121-0/+1
| | | | PR: 260201
* science/nest: Update 2.20.1 -> 3.1Yuri Victorovich2021-10-215-129/+680
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* science/nest: Mark the PYTHON option broken; Add the 'test' targetYuri Victorovich2021-10-201-3/+7
| | | | Reported by: Filippo Adamo <filippo.adamo@gmx.de> (broken python module)
* science/nest: fix build on powerpcPiotr Kubaj2021-06-301-1/+9
| | | | LLVM on powerpc doesn't have libomp.
* math/gsl: update to 2.7Tobias C. Berner2021-06-161-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | From [1] * What is new in gsl-2.7: * fixed doc bug for gsl_histogram_min_bin (lhcsky at 163.com) * fixed bug #60335 (spmatrix test failure, J. Lamb) * fixed bug #36577 * clarified documentation on interpolation accelerators (V. Krishnan) * fixed bug #45521 (erroneous GSL_ERROR_NULL in ode-initval2, thanks to M. Sitte) * fixed doc bug #59758 * fixed bug #58202 (rstat median for n=5) * added support for native C complex number types in gsl_complex when using a C11 compiler * upgraded to autoconf 2.71, automake 1.16.3, libtool 2.4.6 * updated exponential fitting example for nonlinear least squares * added banded LU decomposition and solver (gsl_linalg_LU_band) * New functions added to the library: - gsl_matrix_norm1 - gsl_spmatrix_norm1 - gsl_matrix_complex_conjtrans_memcpy - gsl_linalg_QL: decomp, unpack - gsl_linalg_complex_QR_* (thanks to Christian Krueger) - gsl_vector_sum - gsl_matrix_scale_rows - gsl_matrix_scale_columns - gsl_multilarge_linear_matrix_ptr - gsl_multilarge_linear_rhs_ptr - gsl_spmatrix_dense_add (renamed from gsl_spmatrix_add_to_dense) - gsl_spmatrix_dense_sub - gsl_linalg_cholesky_band: solvem, svxm, scale, scale_apply - gsl_linalg_QR_UD: decomp, lssolve - gsl_linalg_QR_UU: decomp, lssolve, QTvec - gsl_linalg_QR_UZ: decomp - gsl_multifit_linear_lcurvature - gsl_spline2d_eval_extrap * bug fix in checking vector lengths in gsl_vector_memcpy (dieggsy@pm.me) * made gsl_sf_legendre_array_index() inline and documented - gsl_sf_legendre_nlm() [1] http://git.savannah.gnu.org/cgit/gsl.git/tree/NEWS PR: 256423 Exp-run by: antoine
* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
| | | | Reported by: lwhsu
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
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* science/nest: Update 2.20.0 -> 2.20.1Yuri Victorovich2020-12-063-6/+6
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=557121
* Drop dependency on devel/openmpJan Beich2020-03-081-2/+2
| | | | | | | | | | - Drop if devel/llvm* was used as a substitute Approved by: yuri, rene (earlier version) Differential Revision: https://reviews.freebsd.org/D23020 Notes: svn path=/head/; revision=528082
* science/nest: Update 2.18.0 -> 2.20.0Yuri Victorovich2020-02-013-10/+12
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=524759
* math/gsl: update to 2.6Tobias C. Berner2019-10-251-1/+1
| | | | | | | | | | | | | - math/p5-Math-GSL does not seem to have any upstream activity to make it work with this version -> mark it broken - this also breaks the two consumers of this port - biology/gemma: has a conflict with cblas, and is makred broken. PR: 241363 Exp-run by: antoine Notes: svn path=/head/; revision=515671
* devel/openmp: update to 9.0.0Jan Beich2019-09-211-1/+1
| | | | | | | | | | | - Connect tests to the framework to help QA remaining patches - Force rebuild all consumers after https://reviews.llvm.org/D59783 Changes: http://llvm.org/viewvc/llvm-project/openmp/tags/RELEASE_900/final/?view=log ABI: https://abi-laboratory.pro/tracker/timeline/llvm_openmp/ Notes: svn path=/head/; revision=512535
* science/nest: fix build with GCC-based architecturesPiotr Kubaj2019-09-212-1/+6
| | | | | | | | | | nestkernel/simulation_manager.h needs include sys/time.h for timeval struct when compiling with GCC. PR: 239482 Approved by: yuri (maintainer), linimon (mentor) Notes: svn path=/head/; revision=512523
* Bump PORTREVISION for ports depending on the canonical version of GCCGerald Pfeifer2019-07-261-0/+1
| | | | | | | | | | | | | | | | | | as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3 to GCC 9.1 under most circumstances now after revision 507371. This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using Mk/bsd.octave.mk which in turn features USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang, c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib plus, everything INDEX-11 shows with a dependency on lang/gcc9 now. PR: 238330 Notes: svn path=/head/; revision=507372
* science/nest: Update 2.16.0 -> 2.18.0Yuri Victorovich2019-06-284-18/+163
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=505275
* science/nest: Broken on i386Yuri Victorovich2019-05-181-0/+2
| | | | | | | Reported by: fallout Notes: svn path=/head/; revision=501986
* science/nest: Update 2.14.0-2100 -> 2.16.0Yuri Victorovich2019-05-123-164/+10
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=501367
* science/nest: PYTHON_USE=python=cython instead of PYTHON_BUILD_DEPENDSYuri Victorovich2019-05-111-1/+1
| | | | | | | Reported by: mat Notes: svn path=/head/; revision=501306
* New port: science/nest: Simulator for spiking neural network modelsYuri Victorovich2019-05-117-0/+643
Notes: svn path=/head/; revision=501303
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