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PORTNAME= bedtools
DISTVERSIONPREFIX= v
DISTVERSION= 2.31.1
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
COMMENT= Toolset for genome set arithmetic such as intersect, union
WWW= https://bedtools.readthedocs.org/
LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE
TEST_DEPENDS= bash:shells/bash
USES= compiler:c++11-lang gmake python
USE_GITHUB= yes
GH_ACCOUNT= arq5x
GH_PROJECT= bedtools2
pre-configure:
@${REINPLACE_CMD} -e 's|python|${PYTHON_CMD}|g' ${WRKSRC}/Makefile
post-install:
${STRIP_CMD} ${STAGEDIR}${PREFIX}/bin/bedtools
do-test:
(cd ${WRKSRC}/test && bash test.sh)
.include <bsd.port.mk>
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