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PORTNAME= CheckM
DISTVERSIONPREFIX= v
DISTVERSION= 1.2.2
CATEGORIES= biology python
MAINTAINER= yuri@FreeBSD.org
COMMENT= Quality assessment tool for the microbial genomes
WWW= https://ecogenomics.github.io/CheckM/
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}DendroPy>0:science/py-DendroPy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}
USES= dos2unix python
USE_GITHUB= yes
GH_ACCOUNT= Ecogenomics
USE_PYTHON= distutils noflavors autoplist
NO_ARCH= yes
.include <bsd.port.mk>
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