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PORTNAME= BioPerl
PORTVERSION= 1.007008
CATEGORIES= biology perl5
MASTER_SITES= CPAN
MASTER_SITE_SUBDIR= CPAN:CJFIELDS
PKGNAMEPREFIX= p5-
DISTNAME= BioPerl-${PORTVERSION:R}${PORTVERSION:E:S|00|.|g}
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= Collection of Perl modules for bioinformatics
WWW= https://metacpan.org/dist/BioPerl \
https://bioperl.org/
LICENSE= ART10 GPLv1+
LICENSE_COMB= dual
LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= ${RUN_DEPENDS}
RUN_DEPENDS= p5-Data-Stag>=0:devel/p5-Data-Stag \
p5-Error>=0:lang/p5-Error \
p5-Graph>=0:math/p5-Graph \
p5-HTTP-Message>=0:www/p5-HTTP-Message \
p5-IO-String>=0:devel/p5-IO-String \
p5-IO-Stringy>=0:devel/p5-IO-Stringy \
p5-IPC-Run>=0:devel/p5-IPC-Run \
p5-List-MoreUtils>=0:lang/p5-List-MoreUtils \
p5-Module-Build>=0:devel/p5-Module-Build \
p5-Set-Scalar>=0:devel/p5-Set-Scalar \
p5-Test-Most>=0:devel/p5-Test-Most \
p5-Test-RequiresInternet>=0:devel/p5-Test-RequiresInternet \
p5-URI>=0:net/p5-URI \
p5-XML-DOM>=0:textproc/p5-XML-DOM \
p5-XML-LibXML>=0:textproc/p5-XML-LibXML \
p5-XML-SAX>=0:textproc/p5-XML-SAX \
p5-XML-SAX-Base>=0:textproc/p5-XML-SAX-Base \
p5-XML-SAX-Writer>=0:textproc/p5-XML-SAX-Writer \
p5-XML-Twig>=0:textproc/p5-XML-Twig \
p5-XML-Writer>=0:textproc/p5-XML-Writer \
p5-YAML>=0:textproc/p5-YAML \
p5-libwww>=0:www/p5-libwww \
p5-libxml>=0:textproc/p5-libxml
TEST_DEPENDS= p5-Test-Memory-Cycle>=0:devel/p5-Test-Memory-Cycle \
p5-Test-Weaken>=0:devel/p5-Test-Weaken
USES= perl5 shebangfix
USE_PERL5= configure
NO_ARCH= yes
OPTIONS_DEFINE= DOCS EXAMPLES
SHEBANG_GLOB= *.pl
post-install-DOCS-on:
@${MKDIR} ${STAGEDIR}${DOCSDIR}
cd ${WRKSRC} && ${INSTALL_DATA} AUTHORS Changes MANIFEST README.md ${STAGEDIR}${DOCSDIR}
post-install-EXAMPLES-on:
@${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
cd ${WRKSRC}/examples/ && ${COPYTREE_SHARE} . ${STAGEDIR}${EXAMPLESDIR}
.include <bsd.port.mk>
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