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|
bin/bp_aacomp
bin/bp_bioflat_index
bin/bp_biogetseq
bin/bp_dbsplit
bin/bp_extract_feature_seq
bin/bp_fastam9_to_table
bin/bp_fetch
bin/bp_filter_search
bin/bp_find-blast-matches
bin/bp_gccalc
bin/bp_genbank2gff3
bin/bp_index
bin/bp_local_taxonomydb_query
bin/bp_make_mrna_protein
bin/bp_mask_by_search
bin/bp_mrtrans
bin/bp_mutate
bin/bp_nexus2nh
bin/bp_nrdb
bin/bp_oligo_count
bin/bp_process_gadfly
bin/bp_process_sgd
bin/bp_revtrans-motif
bin/bp_search2alnblocks
bin/bp_search2gff
bin/bp_search2table
bin/bp_search2tribe
bin/bp_seq_length
bin/bp_seqconvert
bin/bp_seqcut
bin/bp_seqpart
bin/bp_seqret
bin/bp_seqretsplit
bin/bp_split_seq
bin/bp_sreformat
bin/bp_taxid4species
bin/bp_taxonomy2tree
bin/bp_translate_seq
bin/bp_tree2pag
bin/bp_unflatten_seq
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%%PERL5_MAN3%%/Bio::UpdateableSeqI.3.gz
%%PERL5_MAN3%%/Bio::WebAgent.3.gz
%%PERL5_MAN3%%/BioPerl.3.gz
%%PORTDOCS%%%%DOCSDIR%%/AUTHORS
%%PORTDOCS%%%%DOCSDIR%%/Changes
%%PORTDOCS%%%%DOCSDIR%%/MANIFEST
%%PORTDOCS%%%%DOCSDIR%%/README.md
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/Bio-DB-GFF/load_ucsc.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/align/FastAlign.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/align/align_on_codons.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/align/aligntutorial.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/align/simplealign.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/classify_hits_kingdom
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/contributed/nmrpdb_parse.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/contributed/prosite2perl.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/contributed/rebase2list.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/db/est_tissue_query.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/db/get_seqs.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/db/rfetch.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/db/use_registry.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/generate_random_seq.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/longorf.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/make_primers.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/quality/svgtrace.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/rev_and_trans.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/revcom_dir.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/root/README
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/root/exceptions1.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/root/exceptions2.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/root/exceptions3.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/root/exceptions4.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/blast_example.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/custom_writer.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/hitwriter.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/hspwriter.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/htmlwriter.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/psiblast_features.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/psiblast_iterations.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/rawwriter.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/resultwriter.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/waba2gff.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/searchio/waba2gff3.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tk/gsequence.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tk/hitdisplay.pl
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/gb_to_gff.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/gff2ps.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/parse_codeml.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/reverse-translate.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/run_genscan.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/run_primer3.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/seq_pattern.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tools/standaloneblast.pl
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/tree/paup2phylip.pl
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