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PORTNAME= pbbam
DISTVERSION= 0.18.0 # Test with biology/unanimity before upgrading!
PORTREVISION= 6
CATEGORIES= biology
# As of March 2018, unanimity is no longer open source.
# See https://github.com/PacificBiosciences/ccs.
MAINTAINER= ports@FreeBSD.org
COMMENT= PacBio BAM C++ library, with SWIG bindings
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
LIB_DEPENDS= libhts.so:biology/htslib \
libboost_regex.so:devel/boost-libs
# Meson needs BOOST_ROOT=${LOCALBASE}
# https://github.com/mesonbuild/meson/issues/2239
USES= compiler:c++14-lang localbase meson pkgconfig python
USE_LDCONFIG= yes
USE_GITHUB= yes
GH_ACCOUNT= PacificBiosciences
pre-configure:
@${REINPLACE_CMD} -e "s|'python'|'${PYTHON_VERSION}'|g" \
${WRKSRC}/meson.build
post-install:
${RLN} ${STAGEDIR}${PREFIX}/lib/libpbbam.so.${PORTVERSION} \
${STAGEDIR}${PREFIX}/lib/libpbbam.so.0.18
${RLN} ${STAGEDIR}${PREFIX}/lib/libpbbam.so.${PORTVERSION} \
${STAGEDIR}${PREFIX}/lib/libpbbam.so.0
.include <bsd.port.mk>
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