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PORTNAME= seqan-apps
DISTVERSIONPREFIX= seqan-v
DISTVERSION= 2.4.0
PORTREVISION= 11
CATEGORIES= biology
MAINTAINER= h2+fbsdports@fsfe.org
COMMENT= Official bioinformatic applications based on the SeqAn library
WWW= https://www.seqan.de/
LICENSE= BSD3CLAUSE LGPL3 GPLv3
LICENSE_COMB= multi
BUILD_DEPENDS= boost-libs>0:devel/boost-libs
USES= cmake compiler:c++14-lang
USE_CXXSTD= c++14
USE_GITHUB= yes
GH_ACCOUNT= seqan
GH_PROJECT= seqan
CMAKE_ARGS= -DSEQAN_BUILD_SYSTEM="SEQAN_RELEASE_APPS"
OPTIONS_RADIO= ARCH
OPTIONS_RADIO_ARCH= SSE4 AVX2 NATIVE
SSE4_DESC= Use SSE4 and POPCNT instructions
SSE4_CMAKE_ON= -DSEQAN_ARCH_SSE4:BOOL=TRUE
AVX2_DESC= Use SSE4, AVX2 and POPCNT instructions
AVX2_CMAKE_ON= -DSEQAN_ARCH_AVX2:BOOL=TRUE
NATIVE_DESC= Use all available instruction sets (-march=native)
NATIVE_CMAKE_ON= -DSEQAN_ARCH_NATIVE:BOOL=TRUE
.include <bsd.port.pre.mk>
.if ${ARCH} == "armv7" || ${ARCH} == "i386" || ${ARCH} == "powerpc"
PLIST_SUB+= RM_I386="@comment "
.else
PLIST_SUB+= RM_I386=""
.endif
.include <bsd.port.post.mk>
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