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PORTNAME= seqwish
DISTVERSIONPREFIX= v
DISTVERSION= 0.7.11
PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= https://github.com/ekg/seqwish/releases/download/v${DISTVERSION}/
MAINTAINER= yuri@FreeBSD.org
COMMENT= Alignment to variation graph inducer
WWW= https://github.com/ekg/seqwish
LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/LICENSE
LIB_DEPENDS= libsdsl.so:devel/sdsl-lite
USES= cmake:noninja compiler:c++14-lang pkgconfig
CMAKE_ARGS= -DEXTRA_FLAGS="" # disable -march=native
PLIST_FILES= bin/${PORTNAME}
OPTIONS_DEFINE= OPENMP
.if exists(/usr/include/omp.h)
OPTIONS_DEFAULT= OPENMP
.else
OPENMP_BROKEN= OpenMP isn't available on this architecture
.endif
OPENMP_CMAKE_BOOL= USE_OPENMP
OPENMP_CXXFLAGS= -fopenmp
OPENMP_BROKEN_OFF= https://github.com/ekg/seqwish/issues/114
post-extract:
@${RM} -r ${WRKSRC}/deps/sdsl-lite
.include <bsd.port.mk>
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