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# $FreeBSD$
PORTNAME= lm
DISTVERSION= 2.3.0
PORTREVISION= 3
DISTVERSIONSUFFIX= -src
CATEGORIES= science
MASTER_SITES= http://scs.illinois.edu/schulten/${PORTNAME}/download/${PORTNAME}${DISTVERSION:R:S/.//}/
PKGNAMESUFFIX= -uiuc
MAINTAINER= yuri@FreeBSD.org
COMMENT= Software for sampling trajectories of the reaction-diffusion equations
LICENSE= UIUC_OPEN_SOURCE_LICENSE
LICENSE_NAME= University of Illinois Open Source License
LICENSE_FILE= ${WRKSRC}/LICENSE
LICENSE_PERMS= auto-accept dist-mirror dist-sell pkg-mirror pkg-sell
BUILD_DEPENDS= swig3.0:devel/swig30
LIB_DEPENDS= libhdf5.so:science/hdf5 \
libprotobuf.so:devel/protobuf \
libsz.so:science/szip
USES= compiler:c++11-lang gettext-runtime gmake
WRKSRC= ${WRKDIR}/${PORTNAME}-${DISTVERSION}
CXXFLAGS+= -DLINUX
MAKE_ENV= BUILD_DIR=${WRKSRC} PROTOBUF_DIR=${LOCALBASE}
USE_CXXSTD= c++11
OPTIONS_DEFINE= MPI PYTHON VMD
OPTIONS_DEFAULT= MPI PYTHON # VMD can't be default because VMD requires manual tarball fetch
OPTIONS_SUB= yes
MPI_USES= fortran
MPI_VARS= XUSE_MPI=1
MPI_VARS_OFF= XUSE_MPI=0
MPI_LIB_DEPENDS= libmpich.so:net/mpich
PYTHON_USES= python
PYTHON_VARS= XUSE_PYTHON=1
PYTHON_VARS_OFF= XUSE_PYTHON=0
PYTHON_CXXFLAGS= -I${PYTHON_SITELIBDIR}/numpy/core/include
PYTHON_BUILD_DEPENDS= ${PYTHON_SITELIBDIR}/numpy/core/include/numpy/arrayobject.h:math/py-numpy@${PY_FLAVOR}
VMD_DESC= Build the VMD plugin
VMD_VARS= XUSE_VMD=1
VMD_VARS_OFF= XUSE_VMD=0
VMD_VARS= VMD_ARCH=${ARCH:S/amd64/FREEBSDAMD64/:S/${ARCH}/FREEBSD/}
VMD_BUILD_DEPENDS= ${LOCALBASE}/vmd/plugins/${VMD_ARCH}/molfile/libmolfile_plugin.h:science/vmd
VMD_PLIST_SUB= VMD_ARCH=${VMD_ARCH}
post-patch:
@${CP} ${WRKSRC}/docs/config/local.mk.linux ${WRKSRC}/local.mk
@${REINPLACE_CMD} -i '' ' \
s|USE_MPI := 0|USE_MPI := ${XUSE_MPI}|; \
s|USE_PYTHON := 1|USE_PYTHON := ${XUSE_PYTHON}|; \
s|USE_VMD := 1|USE_VMD := ${XUSE_VMD}|; \
s|USE_CUDA := 1|USE_CUDA := 0|; \
s|swig|swig3.0|; \
s|/usr/local|${LOCALBASE}|; \
s|INSTALL_PREFIX := /opt/lm|INSTALL_PREFIX := ${STAGEDIR}${PREFIX}|; \
s|BUILD_DIR := Build-linux|BUILD_DIR := Build-freebsd|; \
s|CCFLAGS := -m64 -O2|CCFLAGS := $$(CXXFLAGS)|; \
s|gcc|${CC}|; \
s|g++|${CXX}|; \
s| -lrt||' \
${WRKSRC}/local.mk
post-patch-MPI-on:
@${REINPLACE_CMD} -i '' ' \
s|MPI_COMPILE_FLAGS = .*|MPI_COMPILE_FLAGS =|; \
s|MPI_LINK_FLAGS = .*|MPI_LINK_FLAGS = -lmpich ${LOCALBASE}/lib/gcc${GCC_DEFAULT}/libgcc_s.so|' \
${WRKSRC}/local.mk
post-patch-PYTHON-on:
@${REINPLACE_CMD} -i '' 's|python-config|${PYTHON_CMD}-config|' ${WRKSRC}/local.mk
post-patch-VMD-on:
@${REINPLACE_CMD} -i '' 's|LINUXAMD64|${VMD_ARCH}|' ${WRKSRC}/local.mk
.include <bsd.port.mk>
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