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PORTNAME= pymol
DISTVERSIONPREFIX= v
DISTVERSION= 2.5.0-97
PORTREVISION= 1
DISTVERSIONSUFFIX= -gd24468af
CATEGORIES= science biology python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= yuri@FreeBSD.org
COMMENT= OpenGL-based molecular visualization system
WWW= https://pymol.org/2/
LICENSE= PyMOL
LICENSE_NAME= Open-Source PyMOL Copyright
LICENSE_FILE= ${WRKSRC}/LICENSE
LICENSE_PERMS= dist-mirror dist-sell pkg-mirror pkg-sell auto-accept
BUILD_DEPENDS= ${PYNUMPY} \
${LOCALBASE}/include/glm/glm.hpp:math/glm \
${LOCALBASE}/include/mmtf.hpp:science/mmtf-cpp
LIB_DEPENDS= libfreetype.so:print/freetype2 \
libpng.so:graphics/png \
libmsgpackc.so:devel/msgpack-c \
libnetcdf.so:science/netcdf
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}msgpack>0:devel/py-msgpack@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}Pmw>0:x11-toolkits/py-Pmw@${PY_FLAVOR} \
${PYNUMPY}
USES= compiler:c++11-lang gl gnome python:3.5+ tar:bz2
USE_GL= gl glew glu glut
USE_GNOME= libxml2
USE_PYTHON= distutils concurrent # autoplist is broken: https://github.com/schrodinger/pymol-open-source/issues/99
USE_GITHUB= yes
GH_ACCOUNT= schrodinger
GH_PROJECT= ${PORTNAME}-open-source
CONFLICTS_INSTALL= ${PYTHON_PKGNAMEPREFIX}chempy # chempy port is unrelated, see https://github.com/schrodinger/pymol-open-source/issues/100
CXXFLAGS+= -DMSGPACK_NO_BOOST # in line with MSGPACK_USE_BOOST=OFF in devel/msgpack-cxx
OPTIONS_SINGLE= GUI
OPTIONS_SINGLE_GUI= QT5 TK
OPTIONS_DEFAULT= QT5
QT5_USES= pyqt:5
QT5_USE= PYQT=pyqt5:run
post-patch-TK-on:
@${REINPLACE_CMD} -e ' \
23s|if not PYQT_NAME:|if False:| ; \
s|from PyQt5 import|from X import|' \
${WRKSRC}/modules/${PORTNAME}/Qt/__init__.py
post-install:
@${REINPLACE_CMD} -i '' -e 's|#!/bin/bash|#!/bin/sh|' ${STAGEDIR}${PREFIX}/bin/${PORTNAME}
@${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/${PORTNAME}/_cmd*.so
@${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/chempy/champ/_champ*.so
.include <bsd.port.mk>
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