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authorJason W. Bacon <jwb@FreeBSD.org>2019-09-21 02:51:26 +0000
committerJason W. Bacon <jwb@FreeBSD.org>2019-09-21 02:51:26 +0000
commit2eee6a30e8b1a28d4f7239cbbd7aac6fad90e6f4 (patch)
tree7abc9be8b5055183524f045cabc8a4ec712968be /biology
parent8a83d3eb397a73bef2d8317a2902c1e1545cc074 (diff)
downloadports-2eee6a30e8b1a28d4f7239cbbd7aac6fad90e6f4.tar.gz
ports-2eee6a30e8b1a28d4f7239cbbd7aac6fad90e6f4.zip
biology/p5-TrimGalore: Upgrade to 0.6.4
Improved adapter autodetection, minor bug fixes.
Notes
Notes: svn path=/head/; revision=512462
Diffstat (limited to 'biology')
-rw-r--r--biology/p5-TrimGalore/Makefile4
-rw-r--r--biology/p5-TrimGalore/distinfo6
2 files changed, 5 insertions, 5 deletions
diff --git a/biology/p5-TrimGalore/Makefile b/biology/p5-TrimGalore/Makefile
index 7b5f2c4ebf3f..1e23f2e2f87b 100644
--- a/biology/p5-TrimGalore/Makefile
+++ b/biology/p5-TrimGalore/Makefile
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= TrimGalore
-DISTVERSION= 0.6.1
+DISTVERSION= 0.6.4
CATEGORIES= biology perl5 python
PKGNAMEPREFIX= p5-
@@ -11,7 +11,7 @@ COMMENT= Wrapper around Cutadapt and FastQC for adapter and quality trimming
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
-RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cutadapt>0:biology/py-cutadapt@${PY_FLAVOR} \
+RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}cutadapt>=2.5:biology/py-cutadapt@${PY_FLAVOR} \
fastqc>0:biology/fastqc
# Future: Can 3.4+ be determined from cutadapt dep?
diff --git a/biology/p5-TrimGalore/distinfo b/biology/p5-TrimGalore/distinfo
index da6ec9ed81ef..f3f6ad7e3cf2 100644
--- a/biology/p5-TrimGalore/distinfo
+++ b/biology/p5-TrimGalore/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1553345061
-SHA256 (FelixKrueger-TrimGalore-0.6.1_GH0.tar.gz) = 658578c29d007fe66f9ab49608442be703a6fcf535db06eb82659c7edccb62b0
-SIZE (FelixKrueger-TrimGalore-0.6.1_GH0.tar.gz) = 26825390
+TIMESTAMP = 1568381106
+SHA256 (FelixKrueger-TrimGalore-0.6.4_GH0.tar.gz) = eb57e18203d8a1dce1397b930a348a9969eebaa758b8a7304d04c22f216cea2d
+SIZE (FelixKrueger-TrimGalore-0.6.4_GH0.tar.gz) = 26827580